46 research outputs found

    Estudio faunĂ­stico del macizo de Quinto Real. I. Acaros OribĂĄtidos (Acari, Oribatei)

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    Se han estudiado 3.995 ejemplares de ĂĄcaros oribĂĄtidos (Acari, Òribatei) de 65 muestras pertenecientes a dos hayedos de Quinto Real (Pirineos Occidentales), correspondientes a 69 especies de 43 gĂ©neros. Diez especies son nuevas para la Fauna de España Damaeus verticillipes (Nicolet) , Cepheus tuberoulosus Strenzke, Liaoarus tremella (Linneo), Cara bodes femoralis (Nicolet) , Carabodes retioulatus Berlese, Oppia translamellata~ (Willmann) , Oribella paolii Oudemans, Phauloppia luoorum (Linneo) , Bdwardzetes edwardsii (Nicolet) y Ophidiotrichus aonexus borussica (Sellnick) . Se dan las caracterĂ­sticas climatolĂłgicas, geolĂłgicas, edafolĂłgicas y florĂ­sticas del biotopo

    Colorless devices and reception techniques for polarization multiplexed communications

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    Future optical networks call for flexible, high performance and low cost coherent optical receivers. We present here several advances towards such receivers, including integrated optical couplers with ultra-broad bandwidth, as well as novel reception techniques and architectures that will enable high performance coherent reception without filtering and polarization splitting elements.Universidad de MĂĄlaga - Campus de Excelencia Internacional AndalucĂ­a Tech. Spanish Ministry of Science under project TEC2013-46917-C2-1-

    Subwavelength gratings for sensing and polarization management

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    Sub-wavelength grating (SWGs) structures are becoming important building blocks in planar waveguide photonic devices [1]. SWG structures have been successfully applied in the design of a range of devices with remarkable performance by using refractive index engineering and dispersion engineering techniques [2]. In this work we explore two new promising applications of these structures, namely in evanescent field waveguide sensing and polarization management. For the evanescent waveguide sensing devices, we show that sub- wavelength patterning of silicon wires can be used to control the delocalization of the waveguide mode and therefore enhance both bulk and surface sensitivities (Fig. 1). We will also discuss the implementation of subwavelength structures in efficient polarization splitter and rotator (PSR) devices [3]. PSR devices based on asymmetrical directional couplers typically exhibit stringent fabrication tolerances. We show that by implementing SWG structures in PSR design both the effective mode index and its derivatives with respect to critical dimensions can be controlled, which significantly improves tolerance to fabrication errors (Fig. 2).Universidad de MĂĄlaga, Campus de Excelencia Internacional AndalucĂ­a Tech

    Re-inventing Multimode Interference Couplers Using Subwavelength Gratings

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    We use the concept of subwavelength grating (SWG) refractive-index-engineering to propose and experimentally demonstrate a reduced size, slotted 2x2 MMI coupler. We also present an ultra-broadband 2x2 MMI coupler which is based on SWG dispersion engineering.This work was supported in part by the Spanish Ministerio de Ciencia (project TEC2009-10152), a Formación del Profesorado Universitario scholarship (AP-2006-03355), the European Mirthe project (FP7-2010-257980) and “Universidad de Málaga. Campus de Excelencia Internacional Andalucía Tech

    Subwavelength metamaterial structures for silicon photonics

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    Sub-wavelength periodic metamaterial structures are enabling the design of silicon photonic devices with unprecedented performance in the near infrared band. However, for applications in the promising mid-infrared band it is expected that they acquire even more prominence because for longer wavelengths it is far easier to fabricate structures with a sub- wavelength pitch. Here we report our recent progress in the electromagnetic modeling of sub-wavelength structures, and we will review some of our latest advances in the development of sub-wavelength based devices operating both at near and mid- infrared wavelengths.Universidad de MĂĄlaga. Campus de Excelencia Internacional AndalucĂ­a Tech

    Antitubercular drugs for an old target: GSK693 as a promising InhA direct inhibitor

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    AbstractDespite being one of the first antitubercular agents identified, isoniazid (INH) is still the most prescribed drug for prophylaxis and tuberculosis (TB) treatment and, together with rifampicin, the pillars of current chemotherapy. A high percentage of isoniazid resistance is linked to mutations in the pro-drug activating enzyme KatG, so the discovery of direct inhibitors (DI) of the enoyl-ACP reductase (InhA) has been pursued by many groups leading to the identification of different enzyme inhibitors, active against Mycobacterium tuberculosis (Mtb), but with poor physicochemical properties to be considered as preclinical candidates. Here, we present a series of InhA DI active against multidrug (MDR) and extensively (XDR) drug-resistant clinical isolates as well as in TB murine models when orally dosed that can be a promising foundation for a future treatment

    Unraveling the effect of silent, intronic and missense mutations on VWF splicing: contribution of next generation sequencing in the study of mRNA

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    Large studies in von Willebrand disease patients, including Spanish and Portuguese registries, led to the identification of >250 different mutations. It is a challenge to determine the pathogenic effect of potential splice site mutations on VWF mRNA. This study aimed to elucidate the true effects of 18 mutations on VWF mRNA processing, investigate the contribution of next-generation sequencing to in vivo mRNA study in von Willebrand disease, and compare the findings with in silico prediction. RNA extracted from patient platelets and leukocytes was amplified by RT-PCR and sequenced using Sanger and next generation sequencing techniques. Eight mutations affected VWF splicing: c.1533+1G>A, c.5664+2T>C and c.546G>A (p.=) prompted exon skipping; c.3223-7_3236dup and c.7082-2A>G resulted in activation of cryptic sites; c.3379+1G>A and c.7437G>A) demonstrated both molecular pathogenic mechanisms simultaneously; and the p.Cys370Tyr missense mutation generated two aberrant transcripts. Of note, the complete effect of three mutations was provided by next generation sequencing alone because of low expression of the aberrant transcripts. In the remaining 10 mutations, no effect was elucidated in the experiments. However, the differential findings obtained in platelets and leukocytes provided substantial evidence that four of these would have an effect on VWF levels. In this first report using next generation sequencing technology to unravel the effects of VWF mutations on splicing, the technique yielded valuable information. Our data bring to light the importance of studying the effect of synonymous and missense mutations on VWF splicing to improve the current knowledge of the molecular mechanisms behind von Willebrand disease. clinicaltrials.gov identifier:02869074

    A Customized Pigmentation SNP Array Identifies a Novel SNP Associated with Melanoma Predisposition in the SLC45A2 Gene

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    As the incidence of Malignant Melanoma (MM) reflects an interaction between skin colour and UV exposure, variations in genes implicated in pigmentation and tanning response to UV may be associated with susceptibility to MM. In this study, 363 SNPs in 65 gene regions belonging to the pigmentation pathway have been successfully genotyped using a SNP array. Five hundred and ninety MM cases and 507 controls were analyzed in a discovery phase I. Ten candidate SNPs based on a p-value threshold of 0.01 were identified. Two of them, rs35414 (SLC45A2) and rs2069398 (SILV/CKD2), were statistically significant after conservative Bonferroni correction. The best six SNPs were further tested in an independent Spanish series (624 MM cases and 789 controls). A novel SNP located on the SLC45A2 gene (rs35414) was found to be significantly associated with melanoma in both phase I and phase II (P<0.0001). None of the other five SNPs were replicated in this second phase of the study. However, three SNPs in TYR, SILV/CDK2 and ADAMTS20 genes (rs17793678, rs2069398 and rs1510521 respectively) had an overall p-value<0.05 when considering the whole DNA collection (1214 MM cases and 1296 controls). Both the SLC45A2 and the SILV/CDK2 variants behave as protective alleles, while the TYR and ADAMTS20 variants seem to function as risk alleles. Cumulative effects were detected when these four variants were considered together. Furthermore, individuals carrying two or more mutations in MC1R, a well-known low penetrance melanoma-predisposing gene, had a decreased MM risk if concurrently bearing the SLC45A2 protective variant. To our knowledge, this is the largest study on Spanish sporadic MM cases to date

    Diet and food strategies in a southern al-Andalusian urban environment during Caliphal period, ecija, Sevilla

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    The Iberian medieval period is unique in European history due to the widespread socio-cultural changes that took place after the arrival of Arabs, Berbers and Islam in 711 AD. Recently, isotopic research has been insightful on dietary shifts, status, resource availability and the impact of environment. However, there is no published isotopic research exploring these factors in southern Iberian populations, and as the history of this area differs to the northern regions, this leaves a significant lacuna in our knowledge. This research fills this gap via isotopic analysis of human (n = 66) and faunal (n = 13) samples from the 9th to the 13th century Écija, a town renowned for high temperatures and salinity. Stable carbon (ή13C) and nitrogen (ή15N) isotopes were assessed from rib collagen, while carbon (ή13C) values were derived from enamel apatite. Human diet is consistent with C3 plant consumption with a very minor contribution of C4 plants, an interesting feature considering the suitability of Écija to C4 cereal production. ή15N values vary among adults, which may suggest variable animal protein consumption or isotopic variation within animal species due to differences in foddering. Consideration of ή13C collagen and apatite values together may indicate sugarcane consumption, while moderate ή15N values do not suggest a strong aridity or salinity effect. Comparison with other Iberian groups shows similarities relating to time and location rather than by religion, although more multi-isotopic studies combined with zooarchaeology and botany may reveal subtle differences unobservable in carbon and nitrogen collagen studies alone.OLC is funded by Plan Galego I2C mod.B (ED481D 2017/014). The research was partially funded by the projects “Galician Paleodiet” and by Consiliencia network (ED 431D2017/08) Xunta de GaliciaS

    Phylogenetic classification of the world's tropical forests

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    Knowledge about the biogeographic affinities of the world’s tropical forests helps to better understand regional differences in forest structure, diversity, composition, and dynamics. Such understanding will enable anticipation of region-specific responses to global environmental change. Modern phylogenies, in combination with broad coverage of species inventory data, now allow for global biogeographic analyses that take species evolutionary distance into account. Here we present a classification of the world’s tropical forests based on their phylogenetic similarity. We identify five principal floristic regions and their floristic relationships: (i) Indo-Pacific, (ii) Subtropical, (iii) African, (iv) American, and (v) Dry forests. Our results do not support the traditional neo- versus paleotropical forest division but instead separate the combined American and African forests from their Indo-Pacific counterparts. We also find indications for the existence of a global dry forest region, with representatives in America, Africa, Madagascar, and India. Additionally, a northern-hemisphere Subtropical forest region was identified with representatives in Asia and America, providing support for a link between Asian and American northern-hemisphere forests.</p
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