Ferramenta de análise não destrutiva para obtenção de parâmetros microestruturais baseada em Visão Computacional

Este trabalho apresenta novos parâmetros de medida calculados por um Sistema de Visão Computacional desenvolvido para a Classificação de Microestruturas em Materiais Metálicos. Este sistema é uma ferramenta de análise de imagens adequada para a área de Ciência dos Materiais, permitindo realizar automaticamente a segmentação e quantificação de microestruturas em materiais metálicos. Como evolução deste sistema, este trabalho apresenta novos parâmetros de medida que possibilitam uma análise mais detalhada das microestruturas através de medidas de comprimento, área e perímetro. Para obter estas medidas, utiliza-se o algoritmo de crescimento de regiões e o filtro de Roberts. Após a calibração correta do microscópico óptico usado obtêm-se as fotomicrografias necessárias para a aplicação do sistema desenvolvido. Para validar os resultados obtidos é realizada uma comparação com a análise de microscopia convencional. Portanto, o sistema apresentado é capaz, para além de realizar segmentação e quantificação de microestruturas, de obter parâmetros importantes para uma análise mais detalhada das propriedades mecânica dos materiais baseados em ensaios não destrutivos

Livestock integration into soybean systems improves long‐term system stability and profts without compromising crop yields

Climate models project greater weather variability over the coming decades. High yielding systems that can maintain stable crop yields under variable environmental scenarios are critical to enhance food security. However, the efect of adding a trophic level (i.e. herbivores) on the long-term stability of agricultural systems is not well understood. We used a 16-year dataset from an integrated soybean- beef cattle experiment to measure the impacts of grazing on the stability of key crop, pasture, animal and whole-system outcomes. Treatments consisted of four grazing intensities (10, 20, 30 and 40 cm sward height) on mixed black oat (Avena strigosa) and Italian ryegrass (Lolium multiforum) pastures and an ungrazed control. Stability of both human-digestible protein production and proftability increased at moderate to light grazing intensities, while over-intensifcation or absence of grazing decreased system stability. Grazing did not afect subsequent soybean yields but reduced the chance of crop failure and fnancial loss in unfavorable years. At both lighter and heavier grazing intensities, tradeofs occurred between the stability of herbage production and animal live weight gains. We show that ecological intensifcation of specialized soybean systems using livestock integration can increase system stability and proftability, but the probability of win–win outcomes depends on management

Group'n Route: an edge learning-based clustering and efficient routing scheme leveraging social strength for the Internet of Vehicles

The Internet of Vehicles (IoV) is undoubtedly at the core of the future of intelligent transportation. It will prevail over the road ecosystem, and it will have a huge impact on our lives throughout the provision of seamless connectivity among diverse transportation means. For the network to operate efficiently, the data needs to be quickly spread throughout the network, which requires low computational and bandwidth overheads. However, the dynamics of vehicular environments due to frequent node mobility poses many challenges to realize efficient data dissemination. This work addresses this type of problem by proposing a novel clustering algorithm at the edge of the network and an efficient message routing approach, which is known as Group’n Route (GnR). Both mechanisms resort to machine learning and graph metrics that reflect the social relationships between the nodes. Our performance evaluation reveals that the clustering algorithm yields stable results with varying road scenarios, which are becoming an advisable approach in the presence of mobile IoV nodes. Also, the designed routing protocol achieves two orders of magnitude smaller overhead and almost double the delivery rate when it is compared to traditional routing protocols, which thereby justify that the combination of our two proposed clustering and routing methods are a plausible alternative to support IoV communications in real-world setups

Automated recognition of lung diseases in CT images based on the optimum-path forest classifier

The World Health Organization estimated that around 300 million people have asthma, and 210 million people are affected by Chronic Obstructive Pulmonary Disease (COPD). Also, it is estimated that the number of deaths from COPD increased 30% in 2015 and COPD will become the third major cause of death worldwide by 2030. These statistics about lung diseases get worse when one considers fibrosis, calcifications and other diseases. For the public health system, the early and accurate diagnosis of any pulmonary disease is mandatory for effective treatments and prevention of further deaths. In this sense, this work consists in using information from lung images to identify and classify lung diseases. Two steps are required to achieve these goals: automatically extraction of representative image features of the lungs and recognition of the possible disease using a computational classifier. As to the first step, this work proposes an approach that combines Spatial Interdependence Matrix (SIM) and Visual Information Fidelity (VIF). Concerning the second step, we propose to employ a Gaussian-based distance to be used together with the optimum-path forest (OPF) classifier to classify the lungs under study as normal or with fibrosis, or even affected by COPD. Moreover, to confirm the robustness of OPF in this classification problem, we also considered Support Vector Machines and a Multilayer Perceptron Neural Network for comparison purposes. Overall, the results confirmed the good performance of the OPF configured with the Gaussian distance when applied to SIM- and VIF-based features. The performance scores achieved by the OPF classifier were as follows: average accuracy of 98.2%, total processing time of 117 microseconds in a common personal laptop, and F-score of 95.2% for the three classification classes. These results showed that OPF is a very competitive classifier, and suitable to be used for lung disease classification

SARS-CoV-2 introductions and early dynamics of the epidemic in Portugal

Genomic surveillance of SARS-CoV-2 in Portugal was rapidly implemented by the National Institute of Health in the early stages of the COVID-19 epidemic, in collaboration with more than 50 laboratories distributed nationwide. Methods By applying recent phylodynamic models that allow integration of individual-based travel history, we reconstructed and characterized the spatio-temporal dynamics of SARSCoV-2 introductions and early dissemination in Portugal. Results We detected at least 277 independent SARS-CoV-2 introductions, mostly from European countries (namely the United Kingdom, Spain, France, Italy, and Switzerland), which were consistent with the countries with the highest connectivity with Portugal. Although most introductions were estimated to have occurred during early March 2020, it is likely that SARS-CoV-2 was silently circulating in Portugal throughout February, before the first cases were confirmed. Conclusions Here we conclude that the earlier implementation of measures could have minimized the number of introductions and subsequent virus expansion in Portugal. This study lays the foundation for genomic epidemiology of SARS-CoV-2 in Portugal, and highlights the need for systematic and geographically-representative genomic surveillance.We gratefully acknowledge to Sara Hill and Nuno Faria (University of Oxford) and Joshua Quick and Nick Loman (University of Birmingham) for kindly providing us with the initial sets of Artic Network primers for NGS; Rafael Mamede (MRamirez team, IMM, Lisbon) for developing and sharing a bioinformatics script for sequence curation (https://github.com/rfm-targa/BioinfUtils); Philippe Lemey (KU Leuven) for providing guidance on the implementation of the phylodynamic models; Joshua L. Cherry (National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health) for providing guidance with the subsampling strategies; and all authors, originating and submitting laboratories who have contributed genome data on GISAID (https://www.gisaid.org/) on which part of this research is based. The opinions expressed in this article are those of the authors and do not reflect the view of the National Institutes of Health, the Department of Health and Human Services, or the United States government. This study is co-funded by Fundação para a Ciência e Tecnologia and Agência de Investigação Clínica e Inovação Biomédica (234_596874175) on behalf of the Research 4 COVID-19 call. Some infrastructural resources used in this study come from the GenomePT project (POCI-01-0145-FEDER-022184), supported by COMPETE 2020 - Operational Programme for Competitiveness and Internationalisation (POCI), Lisboa Portugal Regional Operational Programme (Lisboa2020), Algarve Portugal Regional Operational Programme (CRESC Algarve2020), under the PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund (ERDF), and by Fundação para a Ciência e a Tecnologia (FCT).info:eu-repo/semantics/publishedVersio

Pervasive gaps in Amazonian ecological research

Biodiversity loss is one of the main challenges of our time,1,2 and attempts to address it require a clear un derstanding of how ecological communities respond to environmental change across time and space.3,4 While the increasing availability of global databases on ecological communities has advanced our knowledge of biodiversity sensitivity to environmental changes,5–7 vast areas of the tropics remain understudied.8–11 In the American tropics, Amazonia stands out as the world’s most diverse rainforest and the primary source of Neotropical biodiversity,12 but it remains among the least known forests in America and is often underrepre sented in biodiversity databases.13–15 To worsen this situation, human-induced modifications16,17 may elim inate pieces of the Amazon’s biodiversity puzzle before we can use them to understand how ecological com munities are responding. To increase generalization and applicability of biodiversity knowledge,18,19 it is thus crucial to reduce biases in ecological research, particularly in regions projected to face the most pronounced environmental changes. We integrate ecological community metadata of 7,694 sampling sites for multiple or ganism groups in a machine learning model framework to map the research probability across the Brazilian Amazonia, while identifying the region’s vulnerability to environmental change. 15%–18% of the most ne glected areas in ecological research are expected to experience severe climate or land use changes by 2050. This means that unless we take immediate action, we will not be able to establish their current status, much less monitor how it is changing and what is being lostinfo:eu-repo/semantics/publishedVersio