20 research outputs found

    A Genome-Wide Association Study of Diabetic Kidney Disease in Subjects With Type 2 Diabetes

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    dentification of sequence variants robustly associated with predisposition to diabetic kidney disease (DKD) has the potential to provide insights into the pathophysiological mechanisms responsible. We conducted a genome-wide association study (GWAS) of DKD in type 2 diabetes (T2D) using eight complementary dichotomous and quantitative DKD phenotypes: the principal dichotomous analysis involved 5,717 T2D subjects, 3,345 with DKD. Promising association signals were evaluated in up to 26,827 subjects with T2D (12,710 with DKD). A combined T1D+T2D GWAS was performed using complementary data available for subjects with T1D, which, with replication samples, involved up to 40,340 subjects with diabetes (18,582 with DKD). Analysis of specific DKD phenotypes identified a novel signal near GABRR1 (rs9942471, P = 4.5 x 10(-8)) associated with microalbuminuria in European T2D case subjects. However, no replication of this signal was observed in Asian subjects with T2D or in the equivalent T1D analysis. There was only limited support, in this substantially enlarged analysis, for association at previously reported DKD signals, except for those at UMOD and PRKAG2, both associated with estimated glomerular filtration rate. We conclude that, despite challenges in addressing phenotypic heterogeneity, access to increased sample sizes will continue to provide more robust inference regarding risk variant discovery for DKD.Peer reviewe

    Effect of peracetic acid on levels of geosmin, 2-methylisoborneol, and their potential producers in a recirculating aquaculture system for rearing rainbow trout (Oncorhynchus mykiss)

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    In recirculating aquaculture systems (RAS)s, off-flavors and odors, mainly caused by geosmin (GSM) and 2-methylisoborneol (MIB), can accumulate in the flesh of fish from RAS water, reducing the profitability of production. In this study, peracetic acid (PAA) was applied in three application intervals to pump sumps of rainbow trout (Oncorhynchus mykiss) reared in RAS. Using a real-time polymerase chain reaction (qPCR), the potential off-flavor producers were quantified using geoA and MIB synthase genes. Streptomyces was identified as the major GSM producer, and biofilters showed the highest number of potential off-flavor producers. Concentrations of GSM and MIB were analyzed in the circulating water and in the lateral part of the fish fillet. In water, concentrations up to 51 ng L−1 (GSM) and 60.3 ng L−1 (MIB) were found, while in the fillet, these were up to 9.8 ng g−1 (GSM) and 10.2 ng g−1 (MIB), decreasing with increasing number of PAA applications. PAA applications reduced the levels of off-flavor compounds, although this was insufficient to fully prevent the accumulation of GSM and MIB.peerReviewe

    Start-up of a “zero-discharge” recirculating aquaculture system using woodchip denitrification, constructed wetland, and sand infiltration

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    Abstract Recirculating aquaculture systems (RAS) discharge management limits the development of the aquaculture sector, because RAS do not automatically result in low nutrient emissions. Research has helped develop discharge management systems such as wetlands and woodchip bioreactors that have been adopted by Danish commercial model trout farms. To further develop the Danish concept, we have modelled and built a novel “zero-discharge” recirculating aquaculture system with an annual capacity of approximately 14 tonnes. The aim of this paper is to describe the entire concept and present the results from the start-up phase of the whole system. The concept includes the treatment of RAS effluent (overflow and sludge supernatant) using a hybrid solution of a woodchip bioreactor, constructed vertical wetland, and sand infiltration. Using this three-step process, the nitrate, phosphorus, and organic matter effluent are decreased to acceptable levels to reuse the water in the RAS process reducing the need for new raw water. In the first nine months of operation, a water treatment field was used as an end-of-pipe treatment to ensure the water was safe to recirculate for fish. During the winter, the water temperature dropped to 2.7 degrees in the sand filter, but the frost did not reach the water levels in any of the treatment processes. It therefore appears that a hybrid solution can operate sufficiently even in winter conditions. In the first year of operation, a woodchip bioreactor can remove 97 % of the nitrate, although the slow start-up of the RAS caused the bioreactor to be N-limited. On average, 79 % and 92 % of the inflow phosphate concentration was removed in the woodchip bioreactor and the entire hybrid treatment field respectively. The wetland and sand filter removed organic matter sufficiently (35 %), but because of the longer than designed actual water residence, it leached from the bioreactor more than was expected. Further experimentation is needed to identify the financial applicability and performance during higher feeding rates
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