A Comprehensive Study of the L1551 IRS 5 Binary System

We model the Class I source L1551 IRS 5, adopting a flattened infalling envelope surrounding a binary disk system and a circumbinary disk. With our composite model, we calculate self-consistently the spectral energy distribution of each component of the L1551 IRS 5 system, using additional constraints from recent observations by ISO, the water ice feature from observations with SpeX, the SCUBA extended spatial brightness distribution at sub-mm wavelengths, and the VLA spatial intensity distributions at 7 mm of the binary disks. We analyze the sensitivity of our results to the various parameters involved. Our results show that a flattened envelope collapse model is required to explain simultaneously the large scale fluxes and the water ice and silicate features. On the other hand, we find that the circumstellar disks are optically thick in the millimeter range and are inclined so that their outer parts hide the emission along the line of sight from their inner parts. We also find that these disks have lower mass accretion rates than the infall rate of the envelope.Comment: 38 pages, 13 figures. To appear in ApJ (v586 April 1, 2003 issue

The effect of scattering on the structure and SED of protoplanetary disks

In this paper we investigate how the inclusion of scattering of the stellar radiation into a passive flaring disk model affects its structure and spectral energy distribution, and whether neglecting it could significantly decrease the model reliability. In order to address these questions we construct a detailed 1+1D vertical structure model in which the scattering properties of the dust can be varied. Models are presented with and without dust scattering, and for different albedos and phase functions. It is found that scattering has the effect of reducing the disk temperature at all heights, so that the disk "shrinks", i.e., the the density at all intermediate heights decreases. However, this effect in most cases is more than compensated by the increase of the total extinction (absorption + scattering) cross section, so that the surface scale height increases, and images in scattered light will see a slightly thicker disk. The integrated infrared emission decreases as the albedo increases, because an increasing part of the flux captured by the disk is reflected away instead of absorbed and reprocessed. The reduction of the infrared thermal emission of the disk is stronger at short wavelengths (near infrared) and practically negligible at millimeter wavelengths. For relatively low albedo (alb <~ 0.5), or for strongly forward-peaked scattering (g roughly >0.8), the infrared flux reduction is relatively small.Comment: Accepted for publication in Astronomy & Astrophysic

Multiplicity, Disks and Jets in the NGC 2071 Star-Forming Region

We present centimeter and millimeter observations of the NGC 2071 star-forming region performed with the VLA and CARMA. We detected counterparts at 3.6 cm and 3 mm for the previously known sources IRS 1, IRS 2, IRS 3, and VLA 1. All these sources show SEDs dominated by free-free thermal emission at cm wavelengths, and thermal dust emission at mm wavelengths, suggesting that all of them are associated with YSOs. IRS 1 shows a complex morphology at 3.6 cm, with changes in the direction of its elongation. We discuss two possible explanations to this morphology: the result of changes in the direction of a jet due to interactions with a dense ambient medium, or that we are actually observing the superposition of two jets arising from two components of a binary system. Higher angular resolution observations at 1.3 cm support the second possibility, since a double source is inferred at this wavelength. IRS 3 shows a clear jet-like morphology at 3.6 cm. Over a time-span of four years, we observed changes in the morphology of this source that we interpret as due to ejection of ionized material in a jet. The emission at 3 mm of IRS 3 is angularly resolved, with a deconvolved size (FWHM) of ~120 AU, and seems to be tracing a dusty circumstellar disk perpendicular to the radio jet. An irradiated accretion disk model around an intermediate-mass YSO can account for the observed SED and spatial intensity profile at 3 mm, supporting this interpretation.Comment: Accepted by The Astrophysical Journa

A Spatially Resolved Inner Hole in the Disk around GM Aurigae

We present 0.3 arcsec resolution observations of the disk around GM Aurigae with the Submillimeter Array (SMA) at a wavelength of 860 um and with the Plateau de Bure Interferometer at a wavelength of 1.3 mm. These observations probe the distribution of disk material on spatial scales commensurate with the size of the inner hole predicted by models of the spectral energy distribution. The data clearly indicate a sharp decrease in millimeter optical depth at the disk center, consistent with a deficit of material at distances less than ~20 AU from the star. We refine the accretion disk model of Calvet et al. (2005) based on the unresolved spectral energy distribution (SED) and demonstrate that it reproduces well the spatially resolved millimeter continuum data at both available wavelengths. We also present complementary SMA observations of CO J=3-2 and J=2-1 emission from the disk at 2" resolution. The observed CO morphology is consistent with the continuum model prediction, with two significant deviations: (1) the emission displays a larger CO J=3-2/J=2-1 line ratio than predicted, which may indicate additional heating of gas in the upper disk layers; and (2) the position angle of the kinematic rotation pattern differs by 11 +/- 2 degrees from that measured at smaller scales from the dust continuum, which may indicate the presence of a warp. We note that photoevaporation, grain growth, and binarity are unlikely mechanisms for inducing the observed sharp decrease in opacity or surface density at the disk center. The inner hole plausibly results from the dynamical influence of a planet on the disk material. Warping induced by a planet could also potentially explain the difference in position angle between the continuum and CO data sets.Comment: 12 pages, 6 figures, accepted for publication in Ap

Selective Deamidation and Enzymatic Methylation of Seminal Ribonuclease

Isoenzymatic forms alfa2, alfa-beta, and beta2 of bovine seminal ribonuclease are generated by the transformation of beta-type into alfa-type subunit through deamidation of a single amide group. The residue involved in this selective deamidation has been identified as Asn67 . Deamidation occurs by formation of a cyclic imide intermediate involving the Gly at position 68. Opening of the cyclic imide may occur on either side of the nitrogen, generating both the normal alfa-aspartyl and an isoaspartyl residue at position 67. The alfa-carboxyl of the isoaspartyl residue is effectively methylated by bovine brain protein carboxylmethyltransferase

Mineral Processing by Short Circuits in Protoplanetary Disks

Meteoritic chondrules were formed in the early solar system by brief heating of silicate dust to melting temperatures. Some highly refractory grains (Type B calcium-aluminum-rich inclusions, CAIs) also show signs of transient heating. A similar process may occur in other protoplanetary disks, as evidenced by observations of spectra characteristic of crystalline silicates. One possible environment for this process is the turbulent magnetohydrodynamic flow thought to drive accretion in these disks. Such flows generally form thin current sheets, which are sites of magnetic reconnection, and dissipate the magnetic fields amplified by a disk dynamo. We suggest that it is possible to heat precursor grains for chondrules and other high-temperature minerals in current sheets that have been concentrated by our recently described short-circuit instability. We extend our work on this process by including the effects of radiative cooling, taking into account the temperature dependence of the opacity; and by examining current sheet geometry in three-dimensional, global models of magnetorotational instability. We find that temperatures above 1600 K can be reached for favorable parameters that match the ideal global models. This mechanism could provide an efficient means of tapping the gravitational potential energy of the protoplanetary disk to heat grains strongly enough to form high-temperature minerals. The volume-filling nature of turbulent magnetic reconnection is compatible with constraints from chondrule-matrix complementarity, chondrule-chondrule complementarity, the occurrence of igneous rims, and compound chondrules. The same short-circuit mechanism may perform other high-temperature mineral processing in protoplanetary disks such as the production of crystalline silicates and CAIs.Comment: 6 pages, 3 figures, ApJL published versio