35 research outputs found

    High-Throughput miRNA and mRNA Sequencing of Paired Colorectal Normal, Tumor and Metastasis Tissues and Bioinformatic Modeling of miRNA-1 Therapeutic Applications

    Get PDF
    MiRNAs are discussed as diagnostic and therapeutic molecules. However, effective miRNA drug treatments with miRNAs are, so far, hampered by the complexity of the miRNA networks. To identify potential miRNA drugs in colorectal cancer, we profiled miRNA and mRNA expression in matching normal, tumor and metastasis tissues of eight patients by Illumina sequencing. We validated six miRNAs in a large tissue screen containing 16 additional tumor entities and identified miRNA-1, miRNA-129, miRNA-497 and miRNA-215 as constantly de-regulated within the majority of cancers. Of these, we investigated miRNA-1 as representative in a systems-biology simulation of cellular cancer models implemented in PyBioS and assessed the effects of depletion as well as overexpression in terms of miRNA-1 as a potential treatment option. In this system, miRNA-1 treatment reverted the disease phenotype with different effectiveness among the patients. Scoring the gene expression changes obtained through mRNA-Seq from the same patients we show that the combination of deep sequencing and systems biological modeling can help to identify patient-specific responses to miRNA treatments. We present this data as guideline for future pre-clinical assessments of new and personalized therapeutic options

    Determination of nutrient salts by automatic methods both in seawater and brackish water: the phosphate blank

    Get PDF
    9 páginas, 2 tablas, 2 figurasThe main inconvenience in determining nutrients in seawater by automatic methods is simply solved: the preparation of a suitable blank which corrects the effect of the refractive index change on the recorded signal. Two procedures are proposed, one physical (a simple equation to estimate the effect) and the other chemical (removal of the dissolved phosphorus with ferric hydroxide).Support for this work came from CICYT (MAR88-0245 project) and Conselleria de Pesca de la Xunta de GaliciaPeer reviewe

    AN INTEGRATED MARKETING COMMUNICATIONS PLAN FOR NEBRASKA’S CENTENNIAL MALL

    Get PDF
    Built in 1967 to commemorate the state’s Centennial year, Lincoln’s Centennial Mall is the open pedestrian mall area spanning from the Capitol Building on K Street north to the Nebraska State Historical Society on R Street. Managed by the Lincoln Parks and Recreation Department, the Mall has been the site for many important political and social events, including Robert Kerry’s announcement for his candidacy for President as well as local festivals and functions like Rib Fest and World Day on the Mall. But, as of 2010, the once-grand fountains have been mostly filled in, the steps are not handicapped accessible, the concrete is quickly deteriorating and pedestrian traffic is at a low. Lincoln’s Clark and Enersen Partners architecture firm head the upcoming Centennial Mall Renovation Project. In its new form, the Mall will now be called Nebraska’s Centennial Mall.The project plans to restore Nebraska’s Centennial Mall with more pedestrian-friendly structure, more green spaces and new landscaping, incorporating themes of Nebraska’s past, present and future to create a space all Nebraskans can be proud of. This campaign is planned to raise awareness of the project among Nebraskans and people who live in Lincoln and use the Mall regularly. As the fundraising for this privately funded-project wraps up in 2011, the new Mall will need to have a fresh set of promotional materials and messages to announce its groundbreaking, its on-going construction over several years and, ultimately, its “grand re-opening.” These materials and messages are outlined in an integrated marketing communications project by B. Bach Advertising

    Weakly-coupled quasi-1D helical modes in disordered 3D topological insulator quantum wires

    No full text
    International audienceDisorder remains a key limitation in the search for robust signatures of topological superconductivity in condensed matter. Whereas clean semiconducting quantum wires gave promising results discussed in terms of Majorana bound states, disorder makes the interpretation more complex. Quantum wires of 3D topological insulators offer a serious alternative due to their perfectly-transmitted mode. An important aspect to consider is the mixing of quasi-1D surface modes due to the strong degree of disorder typical for such materials. Here, we reveal that the energy broadening γ\gamma of such modes is much smaller than their energy spacing Δ\Delta, an unusual result for highly-disordered mesoscopic nanostructures. This is evidenced by non-universal conductance fluctuations in highly-doped and disordered Bi2Se3 and Bi2_2Te3_3 nanowires. Theory shows that such a unique behavior is specific to spin-helical Dirac fermions with strong quantum confinement, which retain ballistic properties over an unusually large energy scale due to their spin texture. Our result confirms their potential to investigate topological superconductivity without ambiguity despite strong disorder

    Quasi-ballistic transport of Dirac fermions in a Bi2Se3 nanowire

    Get PDF
    Quantum coherent transport of Dirac fermions in a mesoscopic nanowire of the 3D topological insulator Bi2Se3 is studied in the weak-disorder limit. At very low temperatures, many harmonics are evidenced in the Fourier transform of Aharonov-Bohm oscillations, revealing the long phase-coherence length of surface states. Remarkably, from their exponential temperature dependence, we infer an unusual 1/T power law for the phase coherence length. This decoherence is typical for quasi-ballistic fermions weakly coupled to the dynamics of their environment.Transport Ă©lectronique dans les isolants topologiquesTOPOLOGICAL EFFECTS IN MATTER WITH STRONG SPIN-ORBIT COUPLIN

    Post-compiler Software Optimization for Reducing Energy

    No full text
    Modern compilers typically optimize for executable size and speed, rarely exploring non-functional properties such as power efficiency. These properties are often hardwarespecific, time-intensive to optimize, and may not be amenable to standard dataflow optimizations. We present a general post-compilation approach called Genetic Optimization Algorithm (GOA), which targets measurable non-functional aspects of software execution in programs that compile to x86 assembly. GOA combines insights from profile-guided optimization, superoptimization, evolutionary computation and mutational robustness. GOA searches for program variants that retain required functional behavior while improving non-functional behavior, using characteristic workloads and predictive modeling to guide the search. The resulting optimizations are validated using physical performance measurements and a larger held-out test suite. Our experimental results on PARSEC benchmark programs show average energy reductions of 20%, both for a large AMD system and a small Intel system, while maintaining program functionality on target workloads
    corecore