Models of Experimental Competitive Intensities Predict Home and Away Differences in Invasive Impact and the Effects of an Endophytic Mutualist

Understanding the role of competition in the organization of communities is limited in part by the difficulty of extrapolating the outcomes of small-scale experiments to how such outcomes might affect the distribution and abundance of species. We modeled the community-level outcomes of competition, using experimentally derived competitive effects and responses between an exotic invasive plant, Centaurea stoebe, and species from both its native and nonnative ranges and using changes in these effects and responses elicited by experimentally establishing symbioses between C. stoebe and fungal endophytes. Using relative interaction intensities (RIIs) and holding other life-history factors constant, individual-based and spatially explicit models predicted competitive exclusion of all but one North American species but none of the European species, regardless of the endophyte status of C. stoebe. Concomitantly, C. stoebe was eliminated from the models with European natives but was codominant in models with North American natives. Endophyte symbiosis predicted increased dominance of C. stoebe in North American communities but not in European communities. However, when experimental variation was included, some of the model outcomes changed slightly. Our results are consistent with the idea that the effects of competitive intensity and mutualisms measured at small scales have the potential to play important roles in determining the larger-scale outcomes of invasion and that the stabilizing indirect effects of competition may promote species coexistence

Fungal Endophytes Directly Increase the Competitive Effects of an Invasive Forb

Competitive outcomes among plants can vary in different abiotic and biotic conditions. Here we tested the effects of two phylotypes of Alternaria endophytes on the growth, competitive effects, and competitive responses of the exotic invasive forb Centaurea stoebe. Centaurea stoebe was a better competitor against North American grass species than grasses from its European home range in the absence of endophytes. However, one endophyte both increased the biomass of C. stoebe and reduced the competitive effect of North American grasses on C. stoebe. The competitive effects of C. stoebe on grass species native to North America were enhanced by both fungal endophytes, but not for native European grasses. We do not know the mechanism by which endophytes increased C. stoebe\u27s competitive ability, and particularly against biogeographically new neighbors, but one endophyte increased the competitive ability of C. stoebe without increasing its size, suggesting mechanisms unrelated to increased growth. We tested only a fraction of the different endophytic fungi that have been found in C. stoebe, only scratching the surface of understanding their indirect effects. However, our results are the first to demonstrate such effects of a fungal endophyte infecting an invasive forb, and one of the few to show that endophyte effects on competition do not have to be mediated through herbivory

Ultraviolet-Resistant Bacterial Spores

A document summarizes a study in which it was found that spores of the SAFR-032 strain of Bacillus pumilus can survive doses of ultraviolet (UV) radiation, radiation, and hydrogen peroxide in proportions much greater than those of other bacteria. The study was part of a continuing effort to understand the survivability of bacteria under harsh conditions and develop means of sterilizing spacecraft to prevent biocontamination of Mars that could interfere with the search for life there

Treatment challenge of a cyanobacterium Romeria elegans bloom in a South Australian wastewater treatment plant: a case study.

A bloom of the non-toxic cyanobacterium Romeria elegans in waste stabilisation ponds (WSPs) within Angaston waste water treatment plant (WWTP) has posed an unprecedented treatment challenge for the local water utility. The water from the WSPs is chlorinated for safety prior to reuse on nearby farmland. Cyanobacteria concentrations of approximately 1.2 × 106 cells mL−1 increased the chlorine demand dramatically. Operators continuously increased the disinfectant dose up to 50 mg L−1 to achieve operational guideline values for combined chlorine (0.5-1.0 mg L−1) prior to reuse. Despite this, attempts to achieve targeted combined chlorine residual (CCR) failed. In this study, samples from the waste stabilisation pond at Angaston WWTP were chlorinated over a range of doses. Combined chlorine, disinfection by-product formation, cyanobacteria cell concentration, Escherichia coli inactivation, as well as dissolved organic carbon and free ammonia were monitored. This study shows that, in the occurrence of cyanobacterial blooms, CCR does not directly suggest pathogen removal efficiency and is therefore not an ideal parameter to evaluate the effectiveness of disinfection process in WWTP. Instead, E. coli removal is a more direct and practical parameter for the determination of the efficiency of the disinfection process

Magma Pressure-Temperature-Time Paths During Mafic Explosive Eruptions

We have constrained syneruptive pressure-temperature-time (P-T-t) paths of mafic magmas using a combination of short-timescale cooling and decompression chronometers. Recent work has shown that the thermal histories of crystals in the last few seconds to hours of eruption can be constrained using concentration gradients of MgO inside olivine-hosted melt inclusions, produced in response to syneruptive cooling and crystallization of olivine on the inclusion walls. We have applied this technique to the study of melt inclusions erupted by arc and ocean island volcanoes, including the 1974 subplinian eruption of Fuego volcano; the 1977 fire-fountain eruption of Seguam volcano; and three eruptions of Kilauea volcano (episode 1 of the 1959 Kilauea Iki fire-fountain eruption, the 1500 CE vigorous fire-fountain eruption, and the 1650 CE subplinian eruption). Of the eruptions studied so far, melt inclusions from the 1959 Kilauea Iki eruption record the highest syneruptive cooling rates (3–11°C/s) and the shortest cooling durations (4–19 s), while inclusions from the 1974 Fuego eruption record the slowest cooling rates (0.1–1.7°C/s) and longest cooling durations (21–368 s). The high cooling rates inferred for the Kilauea Iki and Seguam fire fountain eruptions are consistent with air quenching over tens of seconds during and after fragmentation and eruption. Melt inclusions sampled from the interiors of small (∼6 cm diameter) volcanic bombs at Fuego are found to have cooled more slowly on average than inclusions sampled from ash (with particle diameters < 2 mm) during the same eruption, as expected based on conductive cooling models. We find evidence for a systematic relationship between cooling rates and decompression rates of magmas, in which rapidly ascending gas-bearing magmas experience slower cooling during ascent and eruption than slowly ascending magmas. Our magma P-T-t constraints for the Kilauea Iki eruption are in broad agreement with isentropic models that show that the dominant driver of cooling in the conduit is adiabatic expansion of a vapor phase; however, at Fuego and Seguam, our results suggest a significant role for latent heat production and/or open-system degassing (both of which violate assumptions required for isentropic ascent). We thereby caution against the application of isentropic conduit models to magmas containing relatively high initial water concentrations (e.g., arc magmas containing ∼4 wt% water). We note that several processes that have been inferred to occur in volcanic conduits such as magma stalling, magma mingling, open- and closed-system degassing, vapor fluxing, and vapor accumulation (in foam layers or as slugs of gas) are associated with different implied vapor volume fractions during syneruptive ascent. Given the sensitivity of magma P-T-t paths to vapor volume fraction, the syneruptive thermometer presented here may be a means of identifying these processes during the seconds to hours preceding the eruption of mafic magmas

Detectability of Orbital Motion in Stellar Binary and Planetary Microlenses

A standard binary microlensing event lightcurve allows just two parameters of the lensing system to be measured: the mass ratio of the companion to its host, and the projected separation of the components in units of the Einstein radius. However, other exotic effects can provide more information about the lensing system. Orbital motion in the lens is one such effect, which if detected, can be used to constrain the physical properties of the lens. To determine the fraction of binary lens lightcurves affected by orbital motion (the detection efficiency) we simulate lightcurves of orbiting binary star and star-planet (planetary) lenses and simulate the continuous, high-cadence photometric monitoring that will be conducted by the next generation of microlensing surveys that are beginning to enter operation. The effect of orbital motion is measured by fitting simulated lightcurve data with standard static binary microlensing models; lightcurves that are poorly fit by these models are considered to be detections of orbital motion. We correct for systematic false positive detections by also fitting the lightcurves of static binary lenses. For a continuous monitoring survey without intensive follow-up of high magnification events, we find the orbital motion detection efficiency for planetary events with caustic crossings to be 0.061+-0.010, consistent with observational results, and 0.0130+-0.0055 for events without caustic crossings (smooth events). Similarly for stellar binaries, the orbital motion detection efficiency is 0.098+-0.011 for events with caustic crossings and is 0.048+-0.006 for smooth events. These result in combined (caustic crossing and smooth) orbital motion detection efficiencies of 0.029+-0.005 for planetary lenses and 0.070+-0.006 for stellar binary lenses. We also investigate how various microlensing parameters affect the orbital motion detectability. [Abridged]Comment: 21 pages, 22 figures, 5 table

FroDO: From Detections to 3D Objects

Object-oriented maps are important for scene understanding since they jointly capture geometry and semantics, allow individual instantiation and meaningful reasoning about objects. We introduce FroDO, a method for accurate 3D reconstruction of object instances from RGB video that infers their location, pose and shape in a coarse to fine manner. Key to FroDO is to embed object shapes in a novel learnt shape space that allows seamless switching between sparse point cloud and dense DeepSDF decoding. Given an input sequence of localized RGB frames, FroDO first aggregates 2D detections to instantiate a 3D bounding box per object. A shape code is regressed using an encoder network before optimizing shape and pose further under the learnt shape priors using sparse or dense shape representations. The optimization uses multi-view geometric, photometric and silhouette losses. We evaluate on real-world datasets, including Pix3D, Redwood-OS, and ScanNet, for single-view, multi-view, and multi-object reconstruction

Registered reports: an early example and analysis

© 2019 Wiseman et al.The recent ‘replication crisis’ in psychology has focused attention on ways of increasing methodological rigor within the behavioral sciences. Part of this work has involved promoting ‘Registered Reports’, wherein journals peer review papers prior to data collection and publication. Although this approach is usually seen as a relatively recent development, we note that a prototype of this publishing model was initiated in the mid-1970s by parapsychologist Martin Johnson in the European Journal of Parapsychology (EJP). A retrospective and observational comparison of Registered and non-Registered Reports published in the EJP during a seventeen-year period provides circumstantial evidence to suggest that the approach helped to reduce questionable research practices. This paper aims both to bring Johnson’s pioneering work to a wider audience, and to investigate the positive role that Registered Reports may play in helping to promote higher methodological and statistical standards.Peer reviewe