Distributed Holistic Clustering on Linked Data

Link discovery is an active field of research to support data integration in the Web of Data. Due to the huge size and number of available data sources, efficient and effective link discovery is a very challenging task. Common pairwise link discovery approaches do not scale to many sources with very large entity sets. We here propose a distributed holistic approach to link many data sources based on a clustering of entities that represent the same real-world object. Our clustering approach provides a compact and fused representation of entities, and can identify errors in existing links as well as many new links. We support a distributed execution of the clustering approach to achieve faster execution times and scalability for large real-world data sets. We provide a novel gold standard for multi-source clustering, and evaluate our methods with respect to effectiveness and efficiency for large data sets from the geographic and music domains

Field decomposition of transgenic Bt maize residue and the impact on non-target soil invertebrates

Genetically modified Bacillus thuringiensis Berliner (Bt) maize (Zea mays L.) expressing Cry toxins against various target pests is now grown on more than 16 million hectares worldwide, but its potential effects on the soil ecosystem need to be further investigated. In an 8-month field study, we investigated the effects of Bt maize expressing the Cry1Ab protein on both the soil community and maize residue decomposition. We used litterbags with three different mesh sizes (20, 125, and 5,000μm) to investigate potential effects of different soil organism groups on the decomposition processes. Litterbags were incorporated into the soil in fall into a field that had previously been planted with non-Bt maize and subsamples were removed monthly. The dry weight of the remaining residue was measured for all bags. Bt and non-Bt maize decomposed similarly in large mesh bags, which allowed the whole soil organism community to enter and interact with each other. In contrast, Bt maize decomposed significantly faster than non-Bt maize at some sample dates in winter in bags with small and medium mesh sizes. At the end of the experiment in late spring, however, there was no significant difference in the amount of maize plant residues remaining for any of these three mesh sizes. Additionally, soil organisms from bags with the largest mesh size were identified. The most frequent taxa extracted were collembolans (Isotomidae, Tullbergiidae, Entomobryidae), mites (Gamasina, Oribatida), and annelids (Enchytraeidae). Three of these taxa were extracted in higher numbers from non-Bt than Bt residue (Tullbergiidae, Gamasina, Enchytraeidae), while there was no difference in the number of individuals extracted for the remaining three taxa. Our results do not show major changes in the decomposition of Bt maize residue and in the composition of the soil organism community. However, further studies are needed that assess the impact of the continuous release of Cry1Ab via root exudates and plant biomass on the soil ecosyste

Species richness-environment relationships of European arthropods at two spatial grains : habitats and countries

We study how species richness of arthropods relates to theories concerning net primary productivity, ambient energy, water-energy dynamics and spatial environmental heterogeneity. We use two datasets of arthropod richness with similar spatial extents (Scandinavia to Mediterranean), but contrasting spatial grain (local habitat and country). Samples of ground-dwelling spiders, beetles, bugs and ants were collected from 32 paired habitats at 16 locations across Europe. Species richness of these taxonomic groups was also determined for 25 European countries based on the Fauna Europaea database. We tested effects of net primary productivity (NPP), annual mean temperature (T), annual rainfall (R) and potential evapotranspiration of the coldest month (PETmin) on species richness and turnover. Spatial environmental heterogeneity within countries was considered by including the ranges of NPP, T, R and PETmin. At the local habitat grain, relationships between species richness and environmental variables differed strongly between taxa and trophic groups. However, species turnover across locations was strongly correlated with differences in T. At the country grain, species richness was significantly correlated with environmental variables from all four theories. In particular, species richness within countries increased strongly with spatial heterogeneity in T. The importance of spatial heterogeneity in T for both species turnover across locations and for species richness within countries suggests that the temperature niche is an important determinant of arthropod diversity. We suggest that, unless climatic heterogeneity is constant across sampling units, coarse-grained studies should always account for environmental heterogeneity as a predictor of arthropod species richness, just as studies with variable area of sampling units routinely consider area

Complex genital system of a haplogyne spider (Arachnida, Araneae, Tetrablemmidae) indicates internal fertilization and full female control over transferred sperm.

The female genital organs of the tetrablemmid Indicoblemma lannaianum are astonishingly complex. The copulatory orifice lies anterior to the opening of the uterus externus and leads into a narrow insertion duct that ends in a genital cavity. The genital cavity continues laterally in paired tube-like copulatory ducts, which lead into paired, large, sac-like receptacula. Each receptaculum has a sclerotized pore plate with associated gland cells. Paired small fertilization ducts originate in the receptacula and take their curved course inside the copulatory ducts. The fertilization ducts end in slit-like openings in the sclerotized posterior walls of the copulatory ducts. Huge masses of secretions forming large balls are detectable in the female receptacula. An important function of these secretory balls seems to be the encapsulation of spermatozoa in discrete packages in order to avoid the mixing of sperm from different males. In this way, sperm competition may be completely prevented or at least severely limited. Females seem to have full control over transferred sperm and be able to express preference for spermatozoa of certain males. The lumen of the sperm containing secretory balls is connected with the fertilization duct. Activated spermatozoa are only found in the uterus internus of females, which is an indication of internal fertilization. The sperm cells in the uterus internus are characterized by an extensive cytoplasm and an elongated, cone-shaped nucleus. The male genital system of I. lannaianum consists of thick testes and thin convoluted vasa deferentia that open into the wide ductus ejaculatorius. The voluminous globular palpal bulb is filled with seminal fluid consisting of a globular secretion in which only a few spermatozoa are embedded. The spermatozoa are encapsulated by a sheath produced in the genital system. The secretions in females may at least partly consist of male secretions that could be involved in the building of the secretory balls or play a role in sperm activation. The male secretions could also afford nutriments to the spermatozoa

Intraguild predation between the invasive ladybird Harmonia axyridis and non-target European coccinellid species

The coccinellid Harmonia axyridis (Pallas) has been used for augmentative and classical biological control in many environments. More recently it has invaded large parts of Europe and negative effects for native populations of aphidophagous coccinellids are beginning to emerge. Here we investigate intraguild predation (IGP) between H. axyridis and eleven native non-target European coccinellids, including less common species which have not been studied so far within this context of non-target effects. When first-instars of H. axyridis were paired with the native species, only Anatis ocellata (Linnaeus) and Calvia quatuordecimguttata (L.) were significantly superior to the former whereas H. axyridis was superior in three cases, i.e. against Aphidecta obliterata (L.), Coccinella septempunctata L. and Hippodamia variegata (Goeze). Non-significant results were obtained for all other pairings. Similar tests with the fourth larval instar revealed stronger IGP rates and H. axyridis was found to be superior in the interactions with Adalia bipunctata (L.), Adalia decempunctata (L.), A. obliterata, Calvia decemguttata (L.), C. quatuordecimguttata, C. septempunctata, H. variegata, Oenopia conglobata (L.) and Propylea quatuordecimpunctata (L.) whereas non-significant results were obtained for interactions with two other native species. Another experiment revealed that H. axyridis was able to prey more successfully upon egg of most native coccinellid species than vice versa. However, C. quatuordecimguttata eggs seem to be more protected against predation than those of the other species. Survival of first-instar H. axyridis was higher on conspecific eggs compared to eggs of any other species tested. Our results suggest that H. axyridis may become a threat to a wide range of native aphidophagous coccinellids sharing similar ecological niches except species showing high potential for chemical or physical protection

INVESTIMENTOS PÚBLICOS E PRIVADOS NAS CIDADES MÉDIAS BRASILEIRAS E REPERCUSSÕES NA MOBILIDADE ESPACIAL DA POPULAÇÃO: O EXEMPLO DE VITÓRIA DA CONQUISTA/BAHIA- 1970 A 2015

This paper presents an analysis of the dynamics of the regional population and migration in medium-sized cities, based on the Vitória da Conquista example, as a result of public policies implemented in these cities and of the growth of private investments, due to the expansion of consumer market. The analysis in Vitória da Conquista was empirical and based on literature. In Vitoria da Conquista interviews were made with people born in other municipalities. Interviews were also made with city residents and residents of other municipalities in large hospitals, higher education institutions, state and federal agencies in neighborhoods served by housing programs. The defined sample was 220 migrants of the region. The presence of population of regional origin in the medium-sized cities has intensified, as well as the arrival of migrants from other regions, mainly in search of higher education. In medium-sized cities located in areas with high social and economic inequalities, as in Vitória da Conquista, the search for hospital care, education and attendance in government offices with centralized activities, has been recurrent. This extends the presence of the region´s population in the city and promotes dynamism that attracts migrants from other regions in search of work and private entrepreneurs of national and international capital, with repercussions on intra-urban space.Esse trabalho traz uma análise sobre a dinâmica da população regional e migrante nas cidades médias, com base no exemplo de Vitória da Conquista, como resultado de políticas públicas implementadas no processo de constituição dessas cidades e do crescimento dos investimentos privados, em função da ampliação do mercado consumidor. A investigação em Vitória da Conquista, foi empírico-bibliográfica. Foram aplicadas entrevistas semi-estruturadas em Vitória da Conquista, com pessoas nascidas em outros municípios, residentes na cidade e residentes de outros municípios, em hospitais de grande porte, instituições de ensino superior, órgãos públicos estaduais e federais e em bairros atendidos pelos programas habitacionais. A amostra definida foi de 220 migrantes da região. A presença da população de origem regional nas cidades médias tem se intensificado, assim como a chegada de migrantes de outras regiões, principalmente em busca de ensino superior. Nas cidades médias localizadas em regiões com grandes desigualdades sociais e econômicas, como em Vitória da Conquista-BA, a busca por atendimento médico-hospitalar e atendimento em órgãos públicos com atividades centralizadas, tem sido recorrente, o que amplia a presença da população da região de influência na cidade, promovendo o dinamismo que atrai migrantes de fora da região em busca de trabalho e empreendedores privados de capital nacional e internacional, com repercussões no espaço intra-urbano

Do contaminants originating from state-of-the-art treated wastewater impact the ecological quality of surface waters?

Since the 1980s, advances in wastewater treatment technology have led to considerably improved surface water quality in the urban areas of many high income countries. However, trace concentrations of organic wastewater-associated contaminants may still pose a key environmental hazard impairing the ecological quality of surface waters. To identify key impact factors, we analyzed the effects of a wide range of anthropogenic and environmental variables on the aquatic macroinvertebrate community. We assessed ecological water quality at 26 sampling sites in four urban German lowland river systems with a 0–100% load of state-of-the-art biological activated sludge treated wastewater. The chemical analysis suite comprised 12 organic contaminants (five phosphor organic flame retardants, two musk fragrances, bisphenol A, nonylphenol, octylphenol, diethyltoluamide, terbutryn), 16 polycyclic aromatic hydrocarbons, and 12 heavy metals. Non-metric multidimensional scaling identified organic contaminants that are mainly wastewater-associated (i.e., phosphor organic flame retardants, musk fragrances, and diethyltoluamide) as a major impact variable on macroinvertebrate species composition. The structural degradation of streams was also identified as a significant factor. Multiple linear regression models revealed a significant impact of organic contaminants on invertebrate populations, in particular on Ephemeroptera, Plecoptera, and Trichoptera species. Spearman rank correlation analyses confirmed wastewater-associated organic contaminants as the most significant variable negatively impacting the biodiversity of sensitive macroinvertebrate species. In addition to increased aquatic pollution with organic contaminants, a greater wastewater fraction was accompanied by a slight decrease in oxygen concentration and an increase in salinity. This study highlights the importance of reducing the wastewater-associated impact on surface waters. For aquatic ecosystems in urban areas this would lead to: (i) improvement of the ecological integrity, (ii) reduction of biodiversity loss, and (iii) faster achievement of objectives of legislative requirements, e.g., the European Water Framework Directive

Troubling travellers: are ecologically harmful alien species associated with particular introduction pathways?

Prioritization of introduction pathways is seen as an important component of the management of biological invasions. We address whether established alien plants, mammals, freshwater fish and terrestrial invertebrates with known ecological impacts are associated with particular introduction pathways (release, escape, contaminant, stowaway, corridor and unaided). We used the information from the European alien species database DAISIE (www.europe-aliens.org) supplemented by the EASIN catalogue (European Alien Species Information Network), and expert knowledge. Plants introduced by the pathways release, corridor and unaided were disproportionately more likely to have ecological impacts than those introduced as contaminants. In contrast, impacts were not associated with particular introduction pathways for invertebrates, mammals or fish. Thus, while for plants management strategies should be targeted towards the appropriate pathways, for animals, management should focus on reducing the total number of taxa introduced, targeting those pathways responsible for high numbers of introductions. However, regardless of taxonomic group, having multiple introduction pathways increases the likelihood of the species having an ecological impact. This may simply reflect that species introduced by multiple pathways have high propagule pressure and so have a high probability of establishment. Clearly, patterns of invasion are determined by many interacting factors and management strategies should reflect this complexity

Identification of mosquito repellent odours from Ocimum forskolei

<p>Abstract</p> <p>Background</p> <p>Native mosquito repellent plants have a good potential for integrated mosquito control in local settings. <it>Ocimum forskolei</it>, Lamiaceae, is used in Eritrea as a spatial mosquito repellent inside houses, either through crushing fresh plants or burning dry plants. We verified whether active repellent compounds could be identified using gas-chromatography coupled electroantennogram recordings (GC-EAD) with headspace extracts of crushed plants.</p> <p>Results</p> <p>EAD active compounds included (R)-(-)-linalool, (S)-(+)-1-octen-3-ol, trans-caryophyllene, naphthalene, methyl salicylate, (R)-(-)-α-copaene, methyl cinnamate and (E)-ocimene. Of these compounds (R)-(-)-linalool, methyl cinnamate and methyl salicylate reduced landing of female <it>Aedes aegypti </it>on human skin-odor baited tubes. The latter two are novel mosquito repellent compounds.</p> <p>Conclusions</p> <p>The identification of mosquito repellent compounds contributes to deciphering the mechanisms underlying repulsion, supporting the rational design of novel repellents. The three mosquito repellent compounds identified in this study are structurally dissimilar, which may indicate involvement of different sensory neurons in repulsion. Repulsion may well be enhanced through combining different repellent plants (or their synthetic mimics), and can be a locally sustainable part in mosquito control efforts.</p