Self-organized Pattern Formation in Motor-Microtubule Mixtures

We propose and study a hydrodynamic model for pattern formation in mixtures of molecular motors and microtubules. The steady state patterns we obtain in different regimes of parameter space include arrangements of vortices and asters separately as well as aster-vortex mixtures and fully disordered states. Such stable steady states are observed in experiments in vitro. The sequence of patterns obtained in the experiments can be associated with smooth trajectories in a non-equilibrium phase diagram for our model.Comment: 11 pages Latex file, 2 figures include

Boundary Integral Equations for the Laplace-Beltrami Operator

We present a boundary integral method, and an accompanying boundary element discretization, for solving boundary-value problems for the Laplace-Beltrami operator on the surface of the unit sphere $\S$ in $\mathbb{R}^3$. We consider a closed curve ${\cal C}$ on ${\cal S}$ which divides ${\cal S}$ into two parts ${\cal S}_1$ and ${\cal S}_2$. In particular, ${\cal C} = \partial {\cal S}_1$ is the boundary curve of ${\cal S}_1$. We are interested in solving a boundary value problem for the Laplace-Beltrami operator in $\S_2$, with boundary data prescribed on \C

Semilinear mixed problems on Hilbert complexes and their numerical approximation

Arnold, Falk, and Winther recently showed [Bull. Amer. Math. Soc. 47 (2010), 281-354] that linear, mixed variational problems, and their numerical approximation by mixed finite element methods, can be studied using the powerful, abstract language of Hilbert complexes. In another recent article [arXiv:1005.4455], we extended the Arnold-Falk-Winther framework by analyzing variational crimes (a la Strang) on Hilbert complexes. In particular, this gave a treatment of finite element exterior calculus on manifolds, generalizing techniques from surface finite element methods and recovering earlier a priori estimates for the Laplace-Beltrami operator on 2- and 3-surfaces, due to Dziuk [Lecture Notes in Math., vol. 1357 (1988), 142-155] and later Demlow [SIAM J. Numer. Anal., 47 (2009), 805-827], as special cases. In the present article, we extend the Hilbert complex framework in a second distinct direction: to the study of semilinear mixed problems. We do this, first, by introducing an operator-theoretic reformulation of the linear mixed problem, so that the semilinear problem can be expressed as an abstract Hammerstein equation. This allows us to obtain, for semilinear problems, a priori solution estimates and error estimates that reduce to the Arnold-Falk-Winther results in the linear case. We also consider the impact of variational crimes, extending the results of our previous article to these semilinear problems. As an immediate application, this new framework allows for mixed finite element methods to be applied to semilinear problems on surfaces.Comment: 22 pages; v2: major revision, particularly sharpening of error estimates in Section

Electric field formulation for thin film magnetization problems

We derive a variational formulation for thin film magnetization problems in type-II superconductors written in terms of two variables, the electric field and the magnetization function. A numerical method, based on this formulation, makes it possible to accurately compute all variables of interest, including the electric field, for any value of the power in the power law current-voltage relation characterizing the superconducting material. For high power values we obtain a good approximation to the critical state model solution. Numerical simulation results are presented for simply and multiply connected films, and also for an inhomogeneous film.Comment: 15 p., submitte

Self-organization and Mechanical Properties of Active Filament Bundles

A phenomenological description for active bundles of polar filaments is presented. The activity of the bundle results from crosslinks, that induce relative displacements between the aligned filaments. Our generic description is based on momentum conservation within the bundle. By specifying the internal forces, a simple minimal model for the bundle dynamics is obtained, capturing generic dynamic behaviors. In particular, contracted states as well as solitary and oscillatory waves appear through dynamic instabilities. The introduction of filament adhesion leads to self-organized persistent filament transport. Furthermore, calculating the tension, homogeneous bundles are shown to be able to actively contract and to perform work against external forces. Our description is motivated by dynamic phenomena in the cytoskeleton and could apply to stress-fibers and self-organization phenomena during cell-locomotion.Comment: 19 pages, 10 figure

Analysis of repeated high-intensity running performance in professional soccer

The aims of this study conducted in a professional soccer team were two-fold: to characterise repeated high-intensity movement activity profiles in official match-play; b) to inform and verify the construct validity of tests commonly used to determine repeated-sprint ability in soccer by investigating the relationship between the results from a test of repeated-sprint ability and repeated high-intensity performance in competition. High-intensity running performance (movement at velocities >19.8 km/h for a minimum of 1-s duration) in 20 players was measured using computerised time motion analysis. Performance in 80 French League 1 matches was analysed. In addition, 12 out of the 20 players performed a repeated-sprint test on a non-motorized treadmill consisting of 6 consecutive 6s sprints separated by 20s passive recovery intervals. In all players, the majority of consecutive high-intensity actions in competition were performed after recovery durations ≥61s, recovery activity separating these efforts was generally active in nature with the major part of this spent walking, and players performed 1.1±1.1 repeated high-intensity bouts (a minimum of 3 consecutive high-intensity with a mean recovery time ≤20s separating efforts) per game. Players reporting lowest performance decrements in the repeated-sprint ability test performed more high-intensity actions interspersed by short recovery times (≤20s, p<0.01 and ≤30s, p<0.05) compared to those with higher decrements. Across positional roles, central-midfielders performed a greater number of high-intensity actions separated by short recovery times (≤20s) and spent a larger proportion of time running at higher intensities during recovery periods while fullbacks performed the most repeated high-intensity bouts (statistical differences across positional roles from p<0.05 to p<0.001). These findings have implications for repeated high-intensity testing and physical conditioning regimens

Measurement of air and nitrogen fluorescence light yields induced by electron beam for UHECR experiments

Most of the Ultra High Energy Cosmic Ray (UHECR) experiments and projects (HiRes, AUGER, TA, EUSO, TUS,...) use air fluorescence to detect and measure extensive air showers (EAS). The precise knowledge of the Fluorescence Light Yield (FLY) is of paramount importance for the reconstruction of UHECR. The MACFLY - Measurement of Air Cherenkov and Fluorescence Light Yield - experiment has been designed to perform such FLY measurements. In this paper we will present the results of FLY in the 290-440 nm wavelength range for dry air and pure nitrogen, both excited by electrons with energy of 1.5 MeV, 20 GeV and 50 GeV. The experiment uses a 90Sr radioactive source for low energy measurement and a CERN SPS electron beam for high energy. We find that the FLY is proportional to the deposited energy (E_d) in the gas and we show that the air fluorescence properties remain constant independently of the electron energy. At the reference point: atmospheric dry air at 1013 hPa and 23C, the ratio FLY/E_d=17.6 photon/MeV with a systematic error of 13.2%.Comment: 19 pages, 8 figures. Accepted for publication in Astroparticle Physic

Analysis of segregated boundary-domain integral equations for mixed variable-coefficient BVPs in exterior domains

This is the post-print version of the Article. The official published version can be accessed from the link below - Copyright @ 2011 Birkhäuser Boston.Some direct segregated systems of boundary–domain integral equations (LBDIEs) associated with the mixed boundary value problems for scalar PDEs with variable coefficients in exterior domains are formulated and analyzed in the paper. The LBDIE equivalence to the original boundary value problems and the invertibility of the corresponding boundary–domain integral operators are proved in weighted Sobolev spaces suitable for exterior domains. This extends the results obtained by the authors for interior domains in non-weighted Sobolev spaces.The work was supported by the grant EP/H020497/1 ”Mathematical analysis of localised boundary-domain integral equations for BVPs with variable coefficients” of the EPSRC, UK

Breaking spaces and forms for the DPG method and applications including Maxwell equations

Discontinuous Petrov Galerkin (DPG) methods are made easily implementable using `broken' test spaces, i.e., spaces of functions with no continuity constraints across mesh element interfaces. Broken spaces derivable from a standard exact sequence of first order (unbroken) Sobolev spaces are of particular interest. A characterization of interface spaces that connect the broken spaces to their unbroken counterparts is provided. Stability of certain formulations using the broken spaces can be derived from the stability of analogues that use unbroken spaces. This technique is used to provide a complete error analysis of DPG methods for Maxwell equations with perfect electric boundary conditions. The technique also permits considerable simplifications of previous analyses of DPG methods for other equations. Reliability and efficiency estimates for an error indicator also follow. Finally, the equivalence of stability for various formulations of the same Maxwell problem is proved, including the strong form, the ultraweak form, and a spectrum of forms in between