PinR mediates the generation of reversible population diversity in Streptococcus zooepidemicus

Opportunistic pathogens must adapt to and survive in a wide range of complex ecosystems. Streptococcus zooepidemicus is an opportunistic pathogen of horses and many other animals, including humans. The assembly of different surface architecture phenotypes from one genotype is likely to be crucial to the successful exploitation of such an opportunistic lifestyle. Construction of a series of mutants revealed that a serine recombinase, PinR, inverts 114 bp of the promoter of SZO_08560, which is bordered by GTAGACTTTA and TAAAGTCTAC inverted repeats. Inversion acts as a switch, controlling the transcription of this sortase-processed protein, which may enhance the attachment of S. zooepidemicus to equine trachea. The genome of a recently sequenced strain of S. zooepidemicus, 2329 (Sz2329), was found to contain a disruptive internal inversion of 7 kb of the FimIV pilus locus, which is bordered by TAGAAA and TTTCTA inverted repeats. This strain lacks pinR and this inversion may have become irreversible following the loss of this recombinase. Active inversion of FimIV was detected in three strains of S. zooepidemicus, 1770 (Sz1770), B260863 (SzB260863) and H050840501 (SzH050840501), all of which encoded pinR. A deletion mutant of Sz1770 that lacked pinR was no longer capable of inverting its internal region of FimIV. The data highlight redundancy in the PinR sequence recognition motif around a short TAGA consensus and suggest that PinR can reversibly influence the wider surface architecture of S. zooepidemicus, providing this organism with a bet-hedging solution to survival in fluctuating environments

Crustal Accretion in the Gulf of California: An Intermediaterate Spreading Axis

An important objective of Deep Sea Drilling Project (DSDP) Leg 65 was to study crustal accretion at an ocean ridge axis with an intermediate-spreading rate for comparison with previously studied sections displaying slowand fast-spreading rates. The southern Gulf of California was selected for this purpose because the basement displays high seismic velocities (comparable to those observed for Cretaceous basement in the western North Atlantic) and high ambient sedimentation rates, which facilitated penetration of zero-age basement. Four sites were drilled, forming an axial transect immediately south of the Tamayo Fracture Zone (Figs. 1 and 2) and providing a series of characteristic sections into the crust. This chapter attempts to provide a brief synthesis of the results from Leg 65, focusing particularly on the lithology, geochemistry, and paleomagnetic properties of the cored basement material. From these data, we present an interpretation of the processes of magmatic evolution and crustal accretion occurring at the Gulf of California spreading axis

Solutions to Dissonance: Solutions to the Gaps in the Cognitive, Social, and Emotional Development of Students with Disabilities in the Music Classroom

This thesis seeks to define disability as it is used in the music classroom, summarize gaps in the development of students with disabilities in the music classroom, and determine possible solutions to those issues. The research in this thesis is intended to be used as a resource for music educators of all levels and not to criticize the work of countless other educators to impact the lives of students with disabilities. This paper makes use of some classroom observations as well as a survey of music educators from around the state of Kentucky. This paper should not be considered an all-encompassing list of strategies for students with disabilities; however, the strategies that are defined and described should be used as solutions or strategies to mitigate the issues that the author has found in music classrooms

The Mock LISA Data Challenges: from Challenge 3 to Challenge 4

The Mock LISA Data Challenges are a program to demonstrate LISA data-analysis capabilities and to encourage their development. Each round of challenges consists of one or more datasets containing simulated instrument noise and gravitational waves from sources of undisclosed parameters. Participants analyze the datasets and report best-fit solutions for the source parameters. Here we present the results of the third challenge, issued in Apr 2008, which demonstrated the positive recovery of signals from chirping Galactic binaries, from spinning supermassive--black-hole binaries (with optimal SNRs between ~ 10 and 2000), from simultaneous extreme-mass-ratio inspirals (SNRs of 10-50), from cosmic-string-cusp bursts (SNRs of 10-100), and from a relatively loud isotropic background with Omega_gw(f) ~ 10^-11, slightly below the LISA instrument noise.Comment: 12 pages, 2 figures, proceedings of the 8th Edoardo Amaldi Conference on Gravitational Waves, New York, June 21-26, 200

Reflections on undertaking the Probation Qualifying Framework scheme during the transforming rehabilitation changes

This article reflects upon the author’s experience of undertaking the PQF (Probation Qualifying Framework) training scheme during the chaotic period of Transforming Rehabilitation. The author asserts that the uncertainty and precarious nature of the changes were detrimental to an effective learning environment, which ultimately promoted a practice culture of punitiveness and control and did not allow learners the space to be skilful and confident practitioners, comfortable working autonomously. Furthermore, the author contends there is an emerging culture within the NPS (National Probation Service) increasingly fostered on ‘risk management’, which is reflected in the vocational nature of PQF training and is contributing towards a widening cultural gap that is emerging between the community rehabilitation companies and NPS

Deep Underground Science and Engineering Laboratory - Preliminary Design Report

The DUSEL Project has produced the Preliminary Design of the Deep Underground Science and Engineering Laboratory (DUSEL) at the rehabilitated former Homestake mine in South Dakota. The Facility design calls for, on the surface, two new buildings - one a visitor and education center, the other an experiment assembly hall - and multiple repurposed existing buildings. To support underground research activities, the design includes two laboratory modules and additional spaces at a level 4,850 feet underground for physics, biology, engineering, and Earth science experiments. On the same level, the design includes a Department of Energy-shepherded Large Cavity supporting the Long Baseline Neutrino Experiment. At the 7,400-feet level, the design incorporates one laboratory module and additional spaces for physics and Earth science efforts. With input from some 25 science and engineering collaborations, the Project has designed critical experimental space and infrastructure needs, including space for a suite of multidisciplinary experiments in a laboratory whose projected life span is at least 30 years. From these experiments, a critical suite of experiments is outlined, whose construction will be funded along with the facility. The Facility design permits expansion and evolution, as may be driven by future science requirements, and enables participation by other agencies. The design leverages South Dakota's substantial investment in facility infrastructure, risk retirement, and operation of its Sanford Laboratory at Homestake. The Project is planning education and outreach programs, and has initiated efforts to establish regional partnerships with underserved populations - regional American Indian and rural populations

Generation of Functional CLL-Specific Cord Blood CTL Using CD40-Ligated CLL APC

PMCID: PMC3526610This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited

First radial velocity results from the MINiature Exoplanet Radial Velocity Array (MINERVA)

The MINiature Exoplanet Radial Velocity Array (MINERVA) is a dedicated observatory of four 0.7m robotic telescopes fiber-fed to a KiwiSpec spectrograph. The MINERVA mission is to discover super-Earths in the habitable zones of nearby stars. This can be accomplished with MINERVA's unique combination of high precision and high cadence over long time periods. In this work, we detail changes to the MINERVA facility that have occurred since our previous paper. We then describe MINERVA's robotic control software, the process by which we perform 1D spectral extraction, and our forward modeling Doppler pipeline. In the process of improving our forward modeling procedure, we found that our spectrograph's intrinsic instrumental profile is stable for at least nine months. Because of that, we characterized our instrumental profile with a time-independent, cubic spline function based on the profile in the cross dispersion direction, with which we achieved a radial velocity precision similar to using a conventional "sum-of-Gaussians" instrumental profile: 1.8 m s$^{-1}$ over 1.5 months on the RV standard star HD 122064. Therefore, we conclude that the instrumental profile need not be perfectly accurate as long as it is stable. In addition, we observed 51 Peg and our results are consistent with the literature, confirming our spectrograph and Doppler pipeline are producing accurate and precise radial velocities.Comment: 22 pages, 9 figures, submitted to PASP, Peer-Reviewed and Accepte

Aspects of aero-engine nacelle drag

To address the need for accurate nacelle drag estimation, an assessment has been made of different nacelle configurations used for drag evaluation. These include a sting mounted nacelle, a nacelle in free flow with an idealised, freestream pressure matched, efflux and a nacelle with a full exhaust system and representative nozzle pressure ratio. An aerodynamic analysis using numerical methods has been carried out on four nacelles to assess a near field drag extraction method using computational fluid dynamics. The nacelles were modelled at a range of aerodynamic conditions and three were compared against wind tunnel data. A comparison is made between the drag extraction methods used in the wind tunnel analysis and the chosen computational fluid dynamics approach which utilised the modified near-field method for evaluation of drag coefficients and trends with Mach number and mass flow. The effect of sting mounting is quantified and its influence on the drag measured by the wind tunnel methodology determined. This highlights notable differences in the rate of change of drag with free stream Mach number, and also the flow over the nacelle. A post exit stream tube was also found to create a large additional interference term acting on the nacelle. This term typically accounts for 50% of the modified nacelle drag and its inclusion increased the drag rise Mach number by around ΔM = 0.026 from M=0.849 M=0.849 to M=0.875 M=0.875 for the examples considered