105 research outputs found

    Vertical reworking of sediment by the cased caddisfly Glossosomatidae (Agapetus fuscipes) increases sand exposure and availability in armoured gravel-bed rivers

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    Landscapes and ecosystems are the result of two-way interactions between hydro-geomorphic and biological processes. Many animals, particularly those that build structures or transport sediment, are important biogeomorphic agents. Glossosomatidae caddisfly larvae (Insecta, Trichoptera) are globally widespread and abundant inhabitants of gravel-bed rivers. Glossosomatidae build mobile cases from sand that they transport over the river bed. However, there is limited understanding on how Glossosomatidae bioconstructions may influence sand distribution in rivers or how their zoogeomorphic behaviours are influenced by hydraulics or characteristics of the river bed. First, we conducted surveys to quantify the magnitude of sand incorporated into Glossosomatidae (Agapetus fuscipes) cases within a UK river. Second, we studied A. fuscipes movement behaviour and quantified the direction and magnitude of sediment reworking, in a flume, under differing flow velocity and gravel size treatments. We found that 99 % of A. fuscipes larvae transported sediment vertically upwards. This resulted in an average conveyance per larvae of 0.06 g sand upwards by 25 mm (maximum of 50 mm). In gravel beds with a coarse surface layer, this resulted in displacement of sand from sheltered interstices onto the surface of exposed gravel particles. In the flume, this behaviour was maintained even at high flows, sufficient to entrain empty cases from these locations. Whilst the mass of sediment moved by individual larvae is small, dense populations of Glossosomatidae larvae may have important consequences for the vertical distribution of sand in rivers. At our field site, A. fuscipes case density averaged 2192 cases m−2, equivalent to 1.4 t km−1. This finding is important because in gravel-bed rivers frequented by Glossosomatidae larvae, sediment transport is typically limited by the availability of entrainable fine grain sediment at the surface. We discuss the implications of this sediment movement for river bed sedimentary structure, the transport of sand and gravel, and the possible role of Glossosomatidae larvae as ecosystem engineers

    Data Combination: Interferometry and Single-dish Imaging in Radio Astronomy

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    Modern interferometers routinely provide radio-astronomical images down to subarcsecond resolution. However, interferometers filter out spatial scales larger than those sampled by the shortest baselines, which affects the measurement of both spatial and spectral features. Complementary single-dish data are vital for recovering the true flux distribution of spatially resolved astronomical sources with such extended emission. In this work, we provide an overview of the prominent available methods to combine single-dish and interferometric observations. We test each of these methods in the framework of the CASA data analysis software package on both synthetic continuum and observed spectral data sets. We develop a set of new assessment tools that are generally applicable to all radio-astronomical cases of data combination. Applying these new assessment diagnostics, we evaluate the methods' performance and demonstrate the significant improvement of the combined results in comparison to purely interferometric reductions. We provide combination and assessment scripts as add-on material. Our results highlight the advantage of using data combination to ensure high-quality science images of spatially resolved objects.Comment: 29 pages, 20 figures. Accepted for publication in PASP. Code repository available at: github.com/teuben/DataCom

    Draft Genome Sequencing of Three Glutaraldehyde-Tolerant Bacteria from Produced Water from Hydraulic Fracturing

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    Here, we report the draft genome sequence of three glutaraldehyde-resistant isolates from produced water from hydraulic fracturing operations. The three strains were identified as sp. strain G11, sp. strain G15, and sp. strain G16. The genome sequences of these isolates will provide insights into biocide resistance in hydraulic fracturing operations

    The Iowa Homemaker vol.19, no.7

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    The Fashion World, page 1 Highlights of Leather, page 2 Inside Story of Costume Creation, page 3 Sally Cures Spring Fever, page 4 Designers Inspire Clothes-Conscious Coed, page 6 Trim Togs for Oomph, page 7 Fur – A Costume Climax, page 8 Fashion History Through the Story of Dolls, page 9 What’s New In Home Economics, page 10 Design Your Own, page 12 Hosiery Goes Modern, page 13 Research Brings Better Buymanship, page 14 Alums in the News, page 15 Behind Bright Jackets, page 16 Discover Your Jewelry Personality, page 17 Fashion Finds a la francais, page 18 From Journalistic Spindles, page 19 Biography of a Home Economist, page 2

    Evidence for divergent patterns of local selection driving venom variation in Mojave Rattlesnakes (\u3ci\u3eCrotalus scutulatus\u3c/i\u3e)

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    Snake venoms represent an enriched system for investigating the evolutionary processes that lead to complex and dynamic trophic adaptations. It has long been hypothesized that natural selection may drive geographic variation in venom composition, yet previous studies have lacked the population genetic context to examine these patterns. We leverage range-wide sampling of Mojave Rattlesnakes (Crotalus scutulatus) and use a combination of venom, morphological, phylogenetic, population genetic, and environmental data to characterize the striking dichotomy of neurotoxic (Type A) and hemorrhagic (Type B) venoms throughout the range of this species. We find that three of the four previously identified major lineages within C. scutulatus possess a combination of Type A, Type B, and a ‘mixed’ Type A + B venom phenotypes, and that fixation of the two main venom phenotypes occurs on a more fine geographic scale than previously appreciated. We also find that Type A + B individuals occur in regions of inferred introgression, and that this mixed phenotype is comparatively rare. Our results support strong directional local selection leading to fixation of alternative venom phenotypes on a fine geographic scale, and are inconsistent with balancing selection to maintain both phenotypes within a single population. Our comparisons to biotic and abiotic factors further indicate that venom phenotype correlates with fang morphology and climatic variables. We hypothesize that links to fang morphology may be indicative of co-evolution of venom and other trophic adaptations, and that climatic variables may be linked to prey distributions and/or physiology, which in turn impose selection pressures on snake venoms

    A large scale hearing loss screen reveals an extensive unexplored genetic landscape for auditory dysfunction

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    The developmental and physiological complexity of the auditory system is likely reflected in the underlying set of genes involved in auditory function. In humans, over 150 non-syndromic loci have been identified, and there are more than 400 human genetic syndromes with a hearing loss component. Over 100 non-syndromic hearing loss genes have been identified in mouse and human, but we remain ignorant of the full extent of the genetic landscape involved in auditory dysfunction. As part of the International Mouse Phenotyping Consortium, we undertook a hearing loss screen in a cohort of 3006 mouse knockout strains. In total, we identify 67 candidate hearing loss genes. We detect known hearing loss genes, but the vast majority, 52, of the candidate genes were novel. Our analysis reveals a large and unexplored genetic landscape involved with auditory function

    Mendelian gene identification through mouse embryo viability screening.

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    BACKGROUND: The diagnostic rate of Mendelian disorders in sequencing studies continues to increase, along with the pace of novel disease gene discovery. However, variant interpretation in novel genes not currently associated with disease is particularly challenging and strategies combining gene functional evidence with approaches that evaluate the phenotypic similarities between patients and model organisms have proven successful. A full spectrum of intolerance to loss-of-function variation has been previously described, providing evidence that gene essentiality should not be considered as a simple and fixed binary property. METHODS: Here we further dissected this spectrum by assessing the embryonic stage at which homozygous loss-of-function results in lethality in mice from the International Mouse Phenotyping Consortium, classifying the set of lethal genes into one of three windows of lethality: early, mid, or late gestation lethal. We studied the correlation between these windows of lethality and various gene features including expression across development, paralogy and constraint metrics together with human disease phenotypes. We explored a gene similarity approach for novel gene discovery and investigated unsolved cases from the 100,000 Genomes Project. RESULTS: We found that genes in the early gestation lethal category have distinct characteristics and are enriched for genes linked with recessive forms of inherited metabolic disease. We identified several genes sharing multiple features with known biallelic forms of inborn errors of the metabolism and found signs of enrichment of biallelic predicted pathogenic variants among early gestation lethal genes in patients recruited under this disease category. We highlight two novel gene candidates with phenotypic overlap between the patients and the mouse knockouts. CONCLUSIONS: Information on the developmental period at which embryonic lethality occurs in the knockout mouse may be used for novel disease gene discovery that helps to prioritise variants in unsolved rare disease cases

    The History of UofSC\u27s Gibbes Green

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    The following report is a culmination of papers from the Spring 2022 students of Dr. Christian Anderson’s Evolution of Higher Education and Dr. Lydia Brandt’s History of American Architecture courses. The report contains research conducted on the creation of Gibbes Green on the University of South Carolina’s campus. Gibbes Green was the first major expansion made by the university, and signifies an era of development and growth for both the school and Higher Education as a whole
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