The Amazon Tall Tower Observatory (ATTO): Overview of pilot measurements on ecosystem ecology, meteorology, trace gases, and aerosols

The Amazon Basin plays key roles in the carbon and water cycles, climate change, atmospheric chemistry, and biodiversity. It has already been changed significantly by human activities, and more pervasive change is expected to occur in the coming decades. It is therefore essential to establish long-term measurement sites that provide a baseline record of present-day climatic, biogeochemical, and atmospheric conditions and that will be operated over coming decades to monitor change in the Amazon region, as human perturbations increase in the future. The Amazon Tall Tower Observatory (ATTO) has been set up in a pristine rain forest region in the central Amazon Basin, about 150 km northeast of the city of Manaus. Two 80 m towers have been operated at the site since 2012, and a 325 m tower is nearing completion in mid-2015. An ecological survey including a biodiversity assessment has been conducted in the forest region surrounding the site. Measurements of micrometeorological and atmospheric chemical variables were initiated in 2012, and their range has continued to broaden over the last few years. The meteorological and micrometeorological measurements include temperature and wind profiles, precipitation, water and energy fluxes, turbulence components, soil temperature profiles and soil heat fluxes, radiation fluxes, and visibility. A tree has been instrumented to measure stem profiles of temperature, light intensity, and water content in cryptogamic covers. The trace gas measurements comprise continuous monitoring of carbon dioxide, carbon monoxide, methane, and ozone at five to eight different heights, complemented by a variety of additional species measured during intensive campaigns (e.g., VOC, NO, NO2, and OH reactivity). Aerosol optical, microphysical, and chemical measurements are being made above the canopy as well as in the canopy space. They include aerosol light scattering and absorption, fluorescence, number and volume size distributions, chemical composition, cloud condensation nuclei (CCN) concentrations, and hygroscopicity. In this paper, we discuss the scientific context of the ATTO observatory and present an overview of results from ecological, meteorological, and chemical pilot studies at the ATTO site. © Author(s) 2015

Soil-induced impacts on forest structure drive coarse woody debris stocks across central Amazonia

Background: Coarse woody debris (CWD) is an essential component in tropical forest ecosystems and its quantity varies widely with forest types.\ud \ud Aims: Relationships among CWD, soil, forest structure and other environmental factors were analysed to understand the drivers of variation in CWD in forests on different soil types across central Amazonia.\ud \ud Methods: To estimate CWD stocks and density of dead wood debris, 75 permanent forest plots of 0.5 ha in size were assessed along a transect that spanned ca. 700 km in undisturbed forests from north of the Rio Negro to south of the Rio Amazonas. Soil physical properties were evaluated by digging 2-m-deep pits and by taking auger samples.\ud \ud Results: Soil physical properties were the best predictors of CWD stocks; 37% of its variation was explained by effective soil depth. CWD stocks had a two-fold variation across a gradient of physical soil constraints (i.e. effective soil depth, anoxia and soil structure). Average biomass per tree was related to physical soil constraints, which, in turn, had a strong relationship with local CWD stocks.\ud \ud Conclusions: Soil physical properties appear to control average biomass per tree (and through this affect forest structure and dynamics), which, in turn, is correlated with CWD production and stocks

Characterization of Regulatory T Cells in Patients Infected by <i>Leishmania Infantum</i>

High IL-10 levels are pivotal to parasite survival in visceral leishmaniasis (VL). Antigenic stimuli induce IL-10 expression and release of adenosine by CD39/CD73. Due their intrinsic ability to express IL-10 and produce adenosine from extracellular ATP, we evaluated the IL-10, CD39, and CD73 expression by Regulatory T cells (Treg) correlated with VL pathology. Using flow cytometry, Treg cells was analyzed in peripheral blood samples from VL patients (in the presence and absence of Leishmania infantum soluble antigen (SLA)) and healthy individuals (negative endemic control—NEC group), without any treatment. Additionally, IL-10 levels in leukocytes culture supernatant were measured in all groups by ELISA assay. VL patients presented more Treg frequency than NEC group, independently of stimulation. ELISA results demonstrated that SLA induced higher IL-10 expression in the VL group. However, the NEC group had a higher Treg IL-10+ compared to the VL group without stimulation and SLA restored the IL-10 in Treg. Additionally, an increase in Treg CD73+ in the VL group independently of stimuli compared to that in the NEC group was observed. We suggest that Treg are not the main source of IL-10, while the CD73 pathway may be an attempt to modulate the exacerbation of immune response in VL disease

Forest structure along a 600 km transect of natural disturbances and seasonality gradients in central-southern Amazonia

A negative relationship between stand biomass and the density of stems is expected to develop during the self-thinning process in resource-limited forests; this leads to a large proportion of the total biomass occurring in large trees. Nevertheless, frequent disturbance regimes can reduce self-thinning and the accumulation of large trees. We investigated size–density relationships and the contribution of large trees (dbh ≥ 70 cm) to stand biomass in 55 1-ha plots along a 600 km transect in central-southern Amazonia. The effects of natural-disturbance gradients (frequency of storms and soil characteristics) and seasonality on forest-structure components (density of stems and mean individual mass) and stand biomass were examined. Contrary to self-thinning predictions, stand biomass increased in forests with higher stem densities. Large trees contained only an average of 5% of stand biomass, and half of the stand biomass was represented by small trees with diameters < 27 cm. These findings indicate that persistent or strong disturbance plays a critical role in forest structure and biomass in the central-southern Amazon. Frequent storms were identified as an important source of disturbance in the region. Forests under higher frequency of storms had trees with lower individual mass and higher stem packing. More physically restrictive soils seem to magnify the effects of exogenous disturbances limiting individual tree size. Forests in areas with longer dry seasons had lower stem densities; however, individual mass was higher in these areas. These structural components of biomass seem to counterbalance each other in generating total stand biomass. Seasonality affected forest structural components but not stand biomass. Synthesis. Forests of central-southern Amazonia are not resource limited and accumulate most part of their biomass in small- to mid-sized trees. The effects of environmental gradients on specific structural components of stand biomass differ such that strong positive effects on one component can mitigate strong negative effects on other component. Future work on the determinants of stand biomass should investigate forest structure and the contributions of individual components to stand biomass. © 2016 The Authors. Journal of Ecology © 2016 British Ecological Societ