189 research outputs found

    Drag On Non-Spherical Particles In Non-Newtonian Fluids

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    The drag coefficient (CD ) was determined for three different non-spherical particles (cubes, rectangles and cylinders) of different sizes falling in two different non-Newtonian fluids (glycerol and polymer - paraffin oil mixture) using the terminal velocity technique. The variation of the drag coefficient with the variation of non-spherical particle size was explained. Also the relation between CD and Reo (0.25-5) is graphically compared with those previously published in the literature for discs and cylinders with infinite length. Moreover some mathematical relations, previously published in the literature, are verified for the three tested non-spherical particles

    Finite Element Analysis in Porous Media for Incompressible Flow of Contamination from Nuclear Waste

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    A non-linear parabolic system is used to describe incompressible nuclear waste disposal contamination in porous media, in which both molecular diffusion and dispersion are considered. The Galerkin method is applied for the pressure equation. For the brine, radionuclide and heat, a kind of partial upwind finite element scheme is constructed. Examples are included to demonstrate certain aspects of the theory and illustrate the capabilities of the kind of partial upwind finite element approach

    Thylakoid proteome variation of Eutrema salsugineum in response to drought and salinity combined stress

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    It is well known that plant responses to stress involve different events occurring at different places of the cell/leaf and at different time scales in relation with the plant development. In fact, the organelles proteomes include a wide range of proteins that could include a wide range of proteins showing a considerable change in cellular functions and metabolism process. On this basis, a comparative proteomics analysis and fluorescence induction measurements were performed to investigate the photosynthetic performance and the relative thylakoid proteome variation in Eutrema salsugineum cultivated under salt stress (200 mM NaCl), water deficit stress (PEG) and combined treatment (PEG + NaCl) as a hyperosmotic stress. The obtained results showed a significant decrease of plant growth under drought stress conditions, with the appearance of some toxicity symptoms, especially in plants subjected to combined treatment. Application of salt or water stress alone showed no apparent change in the chlorophyll a fluorescence transients, primary photochemistry (fluorescence kinetics of the O-J phase), the PQ pool state (J-I phase changes), (Fv/Fm) and (Fk/Fj) ratios. However, a considerable decrease of all these parameters was observed under severe osmotic stress (PEG + NaCl). The thylakoid proteome analysis revealed 58 proteins showing a significant variation in their abundance between treatments (up or down regulation). The combined treatment (PEG + NaCl) induced a decrease in the expression of the whole PSII core subunit (D1, D2, CP43, CP47, PsbE and PsbH), whereas the OEC subunits proteins remained constant. An increase in the amount of PsaD, PsaE, PsaF, PsaH, PsaK and PsaN was detected under drought stress (PEG5%). No significant change in the accumulation of Cyt b6 and Cyt f was observed. Some regulated proteins involved in cellular redox homeostasis were detected (glutamine synthetase, phosphoglycerate kinase, transketolase), and showed a significant decrease under the combined treatment. Some oxidative stress related proteins were significantly up-regulated under salt or drought stress and could play a crucial role in the PSI photoprotection and the control of ROS production level

    Adomian and Adomian-Padé Technique for Solving Variable Coefficient Variant Boussinesq System

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    In this paper, Adomian and Adomian-Padé Technique are used to find approximate solutions for the Variable-Coefficient Variant Boussinesq System, and using Adomian-Padé Technique for Debug (Remove) The Gap (Complex Root)

    Uranium/Vanadium Separation from El-Sahu Carnotite-Bearing Kaolin, Southwestern Sinai, Egypt

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    A working sample of the lower Carboniferous carnotite-bearing kaolin of wadi El Sahu, Southwestern, Sinai assaying 2.6% uranium and 1.2% vanadium species is subjected to sulfuric acid pug leaching. The extraction behavior of both metal values was first studied from their combined synthetic solution using DEHPA and Aliquat-336 extractants. The obtained results are then applied upon El-Sahu sulfuric acid leach liquor where after proper oxidation of the leach liquor, uranium was selectively extracted as cationic ions by DEHPA solvent, while the vanadium left behind was subsequently extracted as anionic ions using Aliquat-336

    Transcription- and phosphorylation-dependent control of a functional interplay between XBP1s and PINK1 governs mitophagy and potentially impacts Parkinson disease pathophysiology

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    © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives License (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited, and is not altered, transformed, or built upon in any way.Parkinson disease (PD)-affected brains show consistent endoplasmic reticulum (ER) stress and mitophagic dysfunctions. The mechanisms underlying these perturbations and how they are directly linked remain a matter of questions. XBP1 is a transcription factor activated upon ER stress after unconventional splicing by the nuclease ERN1/IREα thereby yielding XBP1s, whereas PINK1 is a kinase considered as the sensor of mitochondrial physiology and a master gatekeeper of mitophagy process. We showed that XBP1s transactivates PINK1 in human cells, primary cultured neurons and mice brain, and triggered a pro-mitophagic phenotype that was fully dependent of endogenous PINK1. We also unraveled a PINK1-dependent phosphorylation of XBP1s that conditioned its nuclear localization and thereby, governed its transcriptional activity. PINK1-induced XBP1s phosphorylation occurred at residues reminiscent of, and correlated to, those phosphorylated in substantia nigra of sporadic PD-affected brains. Overall, our study delineated a functional loop between XBP1s and PINK1 governing mitophagy that was disrupted in PD condition.Abbreviations: 6OHDA: 6-hydroxydopamine; baf: bafilomycin A1; BECN1: beclin 1; CALCOCO2/NDP52: calcium binding and coiled-coil domain 2; CASP3: caspase 3; CCCP: carbonyl cyanide chlorophenylhydrazone; COX8A: cytochrome c oxidase subunit 8A; DDIT3/CHOP: DNA damage inducible transcript 3; EGFP: enhanced green fluorescent protein; ER: endoplasmic reticulum; ERN1/IRE1α: endoplasmic reticulum to nucleus signaling 1; FACS: fluorescence-activated cell sorting; HSPD1/HSP60: heat shock protein family D (Hsp60) member 1; MAP1LC3/LC3: microtubule associated protein 1 light chain 3; MFN2: mitofusin 2; OPTN: optineurin; PD: Parkinson disease; PINK1: PTEN-induced kinase 1; PCR: polymerase chain reaction:; PRKN: parkin RBR E3 ubiquitin protein ligase; XBP1s [p-S61A]: XBP1s phosphorylated at serine 61; XBP1s [p-T48A]: XBP1s phosphorylated at threonine 48; shRNA: short hairpin RNA, SQSTM1/p62: sequestosome 1; TIMM23: translocase of inner mitochondrial membrane 23; TM: tunicamycin; TMRM: tetramethyl rhodamine methylester; TOMM20: translocase of outer mitochondrial membrane 20; Toy: toyocamycin; TP: thapsigargin; UB: ubiquitin; UB (S65): ubiquitin phosphorylated at serine 65; UPR: unfolded protein response, XBP1: X-box binding protein 1; XBP1s: spliced X-box binding protein 1.info:eu-repo/semantics/publishedVersio

    Initial Steps of Thermal Decomposition of Dihydroxylammonium 5,5′-bistetrazole-1,1′-diolate Crystals from Quantum Mechanics

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    Dihydroxylammonium 5,5?-bistetrazole-1,1?-diolate (TKX-50) is a recently synthesized energetic material (EM) with most promising performance, including high energy content, high density, low sensitivity, and low toxicity. TKX-50 forms an ionic crystal in which the unit cell contains two bistetrazole dianions {c-((NO)N3C)-[c-(CN3(NO)], formal charge of ?2} and four hydroxylammonium (NH3OH)+ cations (formal charge of +1). We report here quantum mechanics (QM)-based reaction studies to determine the atomistic reaction mechanisms for the initial decompositions of this system. First we carried out molecular dynamics simulations on the periodic TKX-50 crystal using forces from density functional based tight binding calculations (DFTB-MD), which finds that the chemistry is initiated by proton transfer from the cation to the dianion. Continuous heating of this periodic system leads eventually to dissociation of the protonated or diprotonated bistetrazole to release N2 and N2O. To refine the mechanisms observed in the periodic DFTB-MD, we carried out finite cluster quantum mechanics studies (B3LYP) for the unimolecular decomposition of the bistetrazole. We find that for the bistetrazole dianion, the reaction barrier for release of N2 is 45.1 kcal/mol, while release of N2O is 72.2 kcal/mol. However, transferring one proton to the bistetrazole dianion decreases the reaction barriers to 37.2 kcal/mol for N2 release and 59.5 kcal/mol for N2O release. Thus, we predict that the initial decompositions in TKX-50 lead to N2 release, which in turn provides the energy to drive further decompositions. On the basis of this mechanism, we suggest changes to make the system less sensitive while retaining the large energy release. This may help improve the synthesis strategy of developing high nitrogen explosives with further improved performance

    Quinoa Phenotyping Methodologies: An International Consensus

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    Quinoa is a crop originating in the Andes but grown more widely and with the genetic potential for significant further expansion. Due to the phenotypic plasticity of quinoa, varieties need to be assessed across years and multiple locations. To improve comparability among field trials across the globe and to facilitate collaborations, components of the trials need to be kept consistent, including the type and methods of data collected. Here, an internationally open-access framework for phenotyping a wide range of quinoa features is proposed to facilitate the systematic agronomic, physiological and genetic characterization of quinoa for crop adaptation and improvement. Mature plant phenotyping is a central aspect of this paper, including detailed descriptions and the provision of phenotyping cards to facilitate consistency in data collection. High-throughput methods for multi-temporal phenotyping based on remote sensing technologies are described. Tools for higher throughput post-harvest phenotyping of seeds are presented. A guideline for approaching quinoa field trials including the collection of environmental data and designing layouts with statistical robustness is suggested. To move towards developing resources for quinoa in line with major cereal crops, a database was created. The Quinoa Germinate Platform will serve as a central repository of data for quinoa researchers globally
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