Thermodynamic Structure of the Solar Corona: Tomographic Reconstructions and MHD Modeling

We carry out a study of the global three-dimensional (3D) structure of the electron density and temperature of the quiescent inner solar corona ($r<1.25 R_\odot$) by means of tomographic reconstructions and magnetohydrodynamic simulations. We use differential emission measure tomography (DEMT) and the Alfv\'en Wave Solar Model (AWSoM), in their latest versions. Two target rotations were selected from the solar minimum between solar cycles (SCs) 23 and 24 and the declining phase of SC 24. We report in quantitative detail on the 3D thermodynamic structure of the core and outer layers of the streamer belt, and of the high latitude coronal holes (CH), as revealed by the DEMT analysis. We report on the presence of two types of structures within the streamer belt, loops with temperature decreasing/increasing with height (dubbed down/up loops), as reported first in previous DEMT studies. We also estimate the heating energy flux required at the coronal base to keep these structures stable, found to be or order $10^5 erg\, cm^{-2} s^{-1}$, consistently with previous DEMT and spectroscopic studies. We discuss how these findings are consistent with coronal dissipation of Alfv\'en waves. We compare the 3D results of DEMT and AWSoM in distinct magnetic structures. We show that the agreement between the products of both techniques is the best so far, with an overall agreement $\lesssim 20\%$, depending on the target rotation and the specific coronal region. In its current implementation the ASWsoM model can not reproduce down loops though. Also, in the source region of the fast and slow components of the solar wind, the electron density of the AWSoM model increases with latitude, opposite to the trend observed in DEMT reconstructions

Reviews and bibliographical notices

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Fungal Planet description sheets: 154–213

Novel species of microfungi described in the present study include the following from South Africa: Camarosporium aloes, Phaeococcomyces aloes and Phoma aloes from Aloe, C. psoraleae, Diaporthe psoraleae and D. psoraleae-pinnatae from Psoralea, Colletotrichum euphorbiae from Euphorbia, Coniothyrium prosopidis and Peyronellaea prosopidis from Prosopis, Diaporthe cassines from Cassine, D. diospyricola from Diospyros, Diaporthe maytenicola from Maytenus, Harknessia proteae from Protea, Neofusicoccum ursorum and N. cryptoaustrale from Eucalyptus, Ochrocladosporium adansoniae from Adansonia, Pilidium pseudoconcavum from Greyia radlkoferi, Stagonospora pseudopaludosa from Phragmites and Toxicocladosporium ficiniae from Ficinia. Several species were also described from Thailand, namely: Chaetopsina pini and C. pinicola from Pinus spp., Myrmecridium thailandicum from reed litter, Passalora pseudotithoniae from Tithonia, Pallidocercospora ventilago from Ventilago, Pyricularia bothriochloae from Bothriochloa and Sphaerulina rhododendricola from Rhododendron. Novelties from Spain include Cladophialophora multiseptata, Knufia tsunedae and Pleuroascus rectipilus from soil and Cyphellophora catalaunica from river sediments. Species from the USA include Bipolaris drechsleri from Microstegium, Calonectria blephiliae from Blephilia, Kellermania macrospora (epitype) and K. pseudoyuccigena from Yucca. Three new species are described from Mexico, namely Neophaeosphaeria agaves and K. agaves from Agave and Phytophthora ipomoeae from Ipomoea. Other African species include Calonectria mossambicensis from Eucalyptus (Mozambique), Harzia cameroonensis from an unknown creeper (Cameroon), Mastigosporella anisophylleae from Anisophyllea (Zambia) and Teratosphaeria terminaliae from Terminalia (Zimbabwe). Species from Europe include Auxarthron longisporum from forest soil (Portugal), Discosia pseudoartocreas from Tilia (Austria), Paraconiothyrium polonense and P. lycopodinum from Lycopodium (Poland) and Stachybotrys oleronensis from Iris (France). Two species of Chrysosporium are described from Antarctica, namely C. magnasporum and C. oceanitesii. Finally, Licea xanthospora is described from Australia, Hypochnicium huinayensis from Chile and Custingophora blanchettei from Uruguay. Novel genera of Ascomycetes include Neomycosphaerella from Pseudopentameris macrantha (South Africa), and Paramycosphaerella from Brachystegia sp. (Zimbabwe). Novel hyphomycete genera include Pseudocatenomycopsis from Rothmannia (Zambia), Neopseudocercospora from Terminalia (Zambia) and Neodeightoniella from Phragmites (South Africa), while Dimorphiopsis from Brachystegia (Zambia) represents a novel coelomycetous genus. Furthermore, Alanphillipsia is introduced as a new genus in the Botryosphaeriaceae with four species, A. aloes, A. aloeigena and A. aloetica from Aloe spp. and A. euphorbiae from Euphorbia sp. (South Africa). A new combination is also proposed for Brachysporium torulosum (Deightoniella black tip of banana) as Corynespora torulosa. Morphological and culture characteristics along with ITS DNA barcodes are provided for all taxa

A genomic catalog of Earth’s microbiomes

The reconstruction of bacterial and archaeal genomes from shotgun metagenomes has enabled insights into the ecology and evolution of environmental and host-associated microbiomes. Here we applied this approach to >10,000 metagenomes collected from diverse habitats covering all of Earth’s continents and oceans, including metagenomes from human and animal hosts, engineered environments, and natural and agricultural soils, to capture extant microbial, metabolic and functional potential. This comprehensive catalog includes 52,515 metagenome-assembled genomes representing 12,556 novel candidate species-level operational taxonomic units spanning 135 phyla. The catalog expands the known phylogenetic diversity of bacteria and archaea by 44% and is broadly available for streamlined comparative analyses, interactive exploration, metabolic modeling and bulk download. We demonstrate the utility of this collection for understanding secondary-metabolite biosynthetic potential and for resolving thousands of new host linkages to uncultivated viruses. This resource underscores the value of genome-centric approaches for revealing genomic properties of uncultivated microorganisms that affect ecosystem processes

Cambios en la viabilidad de dos bacterias marinas antárticas expuestas a la radiación solar en la columna de agua: influencia de la mezcla vertical Changes in viability of two Antarctic marine bacteria exposed to solar radiation in the water column: influence of vertical mixing

Se estudió el efecto de la radiación ultravioleta (RUV) sobre dos cepas bacterianas marinas antárticas (UVps y UVvi) en la columna de agua de la caleta Potter (Shetland del Sur, Antártida). Frascos de cuarzo con las cepas en estudio fueron expuestos a la radiación solar en superficie, a 1 m y a 3 m de profundidad. Se realizaron ensayos con exposición directa y con filtros interferenciales que discriminaron la radiación UVA y la UVB. En otros ensayos se simuló una mezcla vertical de 4 m/h. Ambas cepas mostraron una disminución significativa del número de unidades formadoras de colonias, tanto en superficie como a 1 m de profundidad, luego de exponerlas a dosis superficiales de UVB de 8,4 kJ m-2. El estudio con filtros interferenciales mostró una disminución significativa de la viabilidad en ambos tratamientos UV en superficie y a 1 m. La cepa UVps mostró mayor sensibilidad a la UVB que a la UVA. La mezcla vertical amortiguó el daño causado por la UVB cuando la dosis en superficie fue de 4,8 kJ m-2. Este efecto amortiguador no se observó cuando la dosis en superficie fue de 7,7 kJ m-2. Estos resultados muestran que el efecto negativo de la RUV sobre el bacterioplancton sería particularmente importante en el primer metro de profundidad de las aguas costeras antárticas con abundante material particulado en suspensión.The effect of UV radiation on two Antarctic marine bacterial strains (UVps and UVvi) was studied in the water column of Potter Cove (South Shetland, Antarctica). Quartz flasks were filled with the bacterial suspensions and exposed to solar radiation at 0 m, 1 m and 3 m depth. Assays using flasks exposed to direct solar radiation and others using flasks covered with/by interferential filters which discriminate between UVA and UVB, were performed. In other assays, a vertical mixing of 4 m/h was simulated. Both strains showed a significant decrease in viability (expressed as colony - forming units) when exposed to a surface UVB dose of 8.4 kJ m-2. Studies with interferential filters showed a significant decrease at 0 and 1 m depth under both UV treatments. The UVps strain appeared to be more sensitive to UVB than to UVA. Damage produced by UVB was attenuated by the vertical mixing when the surface UVB dose was 4.8 kJ m-2. This effect was not observed when surface UVB dose was 7.7 kJ m-2. These results show that the negative effect caused by UVB radiation on the bacterioplankton would be significant only in the first meter of water column of the Antarctic coastal waters with high levels of suspended particulate material

Posible rol de las bacterias en la degradación de la macroalga Desmarestia anceps Montagne (Phaeophyceae) en las aguas marinas antárticas

Bacterioplankton is a relevant component of coastal marine food webs. In Antarctica, environmental conditions strongly limit the growth rates and metabolic activity of the biota. Macroalgae, such as the large perennial brown algae Desmarestia anceps Montagne, are one of the main primary producers in this environment. The organic matter released as a result of the death and decomposition of these macroalgae is considered a key event in the supply of nutrients to other components of the Antarctic marine biota.Facultad de Ciencias Naturales y Muse

Posible rol de las bacterias en la degradación de la macroalga Desmarestia anceps Montagne (Phaeophyceae) en las aguas marinas antárticas

Bacterioplankton is a relevant component of coastal marine food webs. In Antarctica, environmental conditions strongly limit the growth rates and metabolic activity of the biota. Macroalgae, such as the large perennial brown algae Desmarestia anceps Montagne, are one of the main primary producers in this environment. The organic matter released as a result of the death and decomposition of these macroalgae is considered a key event in the supply of nutrients to other components of the Antarctic marine biota.Facultad de Ciencias Naturales y Muse

Posible rol de las bacterias en la degradación de la macroalga Desmarestia anceps Montagne (Phaeophyceae) en las aguas marinas antárticas

Bacterioplankton is a relevant component of coastal marine food webs. In Antarctica, environmental conditions strongly limit the growth rates and metabolic activity of the biota. Macroalgae, such as the large perennial brown algae Desmarestia anceps Montagne, are one of the main primary producers in this environment. The organic matter released as a result of the death and decomposition of these macroalgae is considered a key event in the supply of nutrients to other components of the Antarctic marine biota.Facultad de Ciencias Naturales y Muse

Modelling the Effect of Copper on the Mo-reduction Rate of the Antarctic Bacterium Pseudomonas sp. strain DRY1

Molybdenum reduction by the Antarctic bacterium Pseudomonas sp. strain DRY1 is strongly inhibited by copper. Mo reduction by this bacterium at 10 mM sodium molybdate shows a sigmoidal pattern with lag periods ranging from 7 to 10 h at various concentrations of copper. As the concentration of copper was increased, the overall Mo reduction rate was inhibited with 1.2 mg/L causing the cessation of Mo reduction rate. The modified Gompertz model was utilized to obtain Mo reduction rates at different concentrations of copper. The Mo reduction rates obtained from the modified Gompertz model was then modelled according to the modified Han-Levenspiel, Wang, Liu, modified Andrews and the Amor models. Out of the five models, only Wang, modified Han-Levenspiel and the Liu models were able to fit the curve, whilst the modified Andrews and Amor models were unable to fit the curves. Both the Wang and modified Han-Levenspiel models show acceptable fitting while the Liu model shows poor fitting. Results of the statistical analysis showed that the modified Han-Levenspiel model was the best model based on the lowest values for RMSE and AICc, highest adjusted correlation coefficient (adR2) and values of AF and BF closest to unity. The parameters obtained from the modified Han Levenspiel model, which were Ccrit, ï­max and m which represent critical heavy metal ion concentration (mg/l), maximum reduction rate (nmole Mo blue/h) and empirical constant values were 0.225 (95%, confidence interval from 0.198 to 0.251), 1.200 (95%, confidence interval from 1.180 to 1.220) and 0.443 (95%, confidence interval from 0.261 to 0.626). The modified Han-Levenspiel accurately predicted the critical copper concentration that completely inhibited molybdenum reduction rate in this bacterium.Fil: Rhaman, M. F.. University Putra Malasya; MalasiaFil: Sabra, Ahmad. University Putra Malasya; MalasiaFil: Mac Cormack, W. P.. Ministerio de Relaciones Exteriores, Comercio Interno y Culto. Dirección Nacional del Antártico. Instituto Antártico Argentino; ArgentinaFil: Ruberto, Lucas Adolfo Mauro. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Nanobiotecnología. Universidad de Buenos Aires. Facultad de Farmacia y Bioquímica. Instituto de Nanobiotecnología; Argentina. Ministerio de Relaciones Exteriores, Comercio Interno y Culto. Dirección Nacional del Antártico. Instituto Antártico Argentino; ArgentinaFil: Shukor, M. Y.. Putra University, Faculty Of Biotechnology And Biomolec; Malasi