An EFT hunter's guide to two-to-two scattering: HEFT and SMEFT on-shell amplitudes

We derive the contact terms contributing to the four-point amplitudes of the standard-model particles, keeping terms with up to quartic energy growth. Imposing just the unbroken low-energy symmetry, and treating the electroweak gauge bosons and the Higgs as independent degrees of freedom, we obtain the most general four-point contact-term amplitudes, corresponding to the HEFT framework. The contact terms are spanned by a basis of Stripped Contact Terms (SCTs), which carry the polarization information, multiplied by polynomials in the Mandelstam invariants. For terms with quadratic energy growth, we also derive the low-energy SMEFT predictions, via on-shell Higgsing of the massless SMEFT contact terms. We discuss several aspects of bottom-up versus top-down on-shell derivations of the HEFT and SMEFT amplitudes, highlighting in particular the simple counting of HEFT dimensions in the on-shell approach and the transparent relation between perturbative unitarity and gauge-invariance in the little-group covariant massive spinor formalism. Our results provide a formulation of EFT analyses directly in terms of observable quantities. For terms with quadratic energy growth, we also provide the mapping to the Warsaw basis.Comment: 38 pages, 1 figur

Physiological traits of the symbiotic bacterium Teredinibacter turnerae isolated from the mangrove shipworm Neoteredo reynei

Nutrition in the Teredinidae family of wood-boring mollusks is sustained by cellulolytic/nitrogen fixing symbiotic bacteria of the Teredinibacter clade. The mangrove Teredinidae Neoteredo reynei is popularly used in the treatment of infectious diseases in the north of Brazil. In the present work, the symbionts of N. reynei, which are strictly confined to the host's gills, were conclusively identified as Teredinibacter turnerae. Symbiont variants obtained in vitro were able to grow using casein as the sole carbon/nitrogen source and under reduced concentrations of NaCl. Furthermore, cellulose consumption in T. turnerae was clearly reduced under low salt concentrations. As a point of interest, we hereby report first hand that T. turnerae in fact exerts antibiotic activity. Furthermore, this activity was also affected by NaCl concentration. Finally, T. turnerae was able to inhibit the growth of Gram-negative and Gram-positive bacteria, this including strains of Sphingomonas sp., Stenotrophomonas maltophilia, Bacillus cereus and Staphylococcus sciuri. Our findings introduce new points of view on the ecology of T. turnerae, and suggest new biotechnological applications for this marine bacterium

Estimates of Particulate Organic Carbon Flowing from the Pelagic Environment to the Benthos through Sponge Assemblages

Despite the importance of trophic interactions between organisms, and the relationship between primary production and benthic diversity, there have been few studies that have quantified the carbon flow from pelagic to benthic environments as a result of the assemblage level activity of suspension-feeding organisms. In this study, we examine the feeding activity of seven common sponge species from the Taputeranga marine reserve on the south coast of Wellington in New Zealand. We analysed the diet composition, feeding efficiency, pumping rates, and the number of food particles (specifically picoplanktonic prokaryotic cells) retained by sponges. We used this information, combined with abundance estimates of the sponges and estimations of the total amount of food available to sponges in a known volume of water (89,821 m3), to estimate: (1) particulate organic carbon (POC) fluxes through sponges as a result of their suspension-feeding activities on picoplankton; and (2) the proportion of the available POC from picoplankton that sponges consume. The most POC acquired by the sponges was from non-photosynthetic bacterial cells (ranging from 0.09 to 4.69 g C d−1 with varying sponge percentage cover from 0.5 to 5%), followed by Prochlorococcus (0.07 to 3.47 g C d−1) and then Synechococcus (0.05 to 2.34 g C d−1) cells. Depending on sponge abundance, the amount of POC that sponges consumed as a proportion of the total POC available was 0.2–12.1% for Bac, 0.4–21.3% for Prochlo, and 0.3–15.8% for Synecho. The flux of POC for the whole sponge assemblage, based on the consumption of prokaryotic picoplankton, ranged from 0.07–3.50 g C m2 d−1. This study is the first to estimate the contribution of a sponge assemblage (rather than focusing on individual sponge species) to POC flow from three groups of picoplankton in a temperate rocky reef through the feeding activity of sponges and demonstrates the importance of sponges to energy flow in rocky reef environments

Transcriptome dynamics of a broad host-range cyanophage and its hosts

Cyanobacteria are highly abundant in the oceans and are constantly exposed to lytic viruses. The T4-like cyanomyoviruses are abundant in the marine environment and have broad host-ranges relative to other cyanophages. It is currently unknown whether broad host-range phages specifically tailor their infection program for each host, or employ the same program irrespective of the host infected. Also unknown is how different hosts respond to infection by the same phage. Here we used microarray and RNA-seq analyses to investigate the interaction between the Syn9 T4-like cyanophage and three phylogenetically, ecologically and genomically distinct marine Synechococcus strains: WH7803, WH8102 and WH8109. Strikingly, Syn9 led a nearly identical infection and transcriptional program in all three hosts. Different to previous assumptions for T4-like cyanophages, three temporally regulated gene expression classes were observed. Furthermore, a novel regulatory element controlled early-gene transcription, and host-like promoters drove middle gene transcription, different to the regulatory paradigm for T4. Similar results were found for the P-TIM40 phage during infection of Prochlorococcus NATL2A. Moreover, genomic and metagenomic analyses indicate that these regulatory elements are abundant and conserved among T4-like cyanophages. In contrast to the near-identical transcriptional program employed by Syn9, host responses to infection involved host-specific genes primarily located in hypervariable genomic islands, substantiating islands as a major axis of phage-cyanobacteria interactions. Our findings suggest that the ability of broad host-range phages to infect multiple hosts is more likely dependent on the effectiveness of host defense strategies than on differential tailoring of the infection process by the phage

Institutionalised corruption in Indonesian irrigation: An analysis of the upeti system

This article analyzes the internal logic of the upeti system in Indonesian irrigation and brings to light how corruption rules are shaped through complex socio-political relationships reflected in the organizational culture of the irrigation agency. Based on 100 interviews with water sector professionals the article highlights: (1) the importance of social relations in shaping institutionalized corruption, (2) how the upeti system justifies corruption practices as the prevailing social norm, and (3) the need for structural change to eradicate corruption. Illustrating how corruption rules are embedded in project management procedures, with projects highly dependent on donor funding, the article highlights the importance of the issue for international agencies and the need to be more politically grounded in promoting their development agenda

Stability of dissolved and soluble Fe(II) in shelf sediment pore waters and release to an oxic water column

Shelf sediments underlying temperate and oxic waters of the Celtic Sea (NW European Shelf) were found to have shallow oxygen penetrations depths from late spring to late summer (2.2–5.8 mm below seafloor) with the shallowest during/after the spring-bloom (mid-April to mid-May) when the organic carbon content was highest. Sediment porewater dissolved iron (dFe, 85%) consisted of Fe(II) and gradually increased from 0.4 to 15 μM at the sediment surface to ~100–170 µM at about 6 cm depth. During the late spring this Fe(II) was found to be mainly present as soluble Fe(II) (>85% sFe, 7 h. Iron(II) oxidation experiments in core top and bottom waters also showed removal from solution but at rates up to 5-times slower than predicted from theoretical reaction kinetics. These data imply the presence of ligands capable of complexing Fe(II) and supressing oxidation. The lower oxidation rate allows more time for the diffusion of Fe(II) from the sediments into the overlying water column. Modelling indicates significant diffusive fluxes of Fe(II) (on the order of 23–31 µmol m−2 day−1) are possible during late spring when oxygen penetration depths are shallow, and pore water Fe(II) concentrations are highest. In the water column this stabilised Fe(II) will gradually be oxidised and become part of the dFe(III) pool. Thus oxic continental shelves can supply dFe to the water column, which is enhanced during a small period of the year after phytoplankton bloom events when organic matter is transferred to the seafloor. This input is based on conservative assumptions for solute exchange (diffusion-reaction), whereas (bio)physical advection and resuspension events are likely to accelerate these solute exchanges in shelf-seas

An EFT hunter’s guide to two-to-two scattering: HEFT and SMEFT on-shell amplitudes

Abstract We derive the contact terms contributing to the four-point amplitudes of the standard model particles, keeping terms with up to quartic energy growth. Imposing just the unbroken low-energy symmetry, and treating the electroweak gauge bosons and the Higgs as independent degrees of freedom, we obtain the most general four-point contact-term amplitudes, corresponding to the Higgs Effective Field Theory (HEFT) framework. The contact terms are spanned by a basis of Stripped Contact Terms, which carry the polarization information, multiplied by polynomials in the Mandelstam invariants. For terms with quadratic energy growth, we also derive the low-energy Standard Model Effective Field Theory (SMEFT) predictions, via on-shell Higgsing of the massless SMEFT contact terms. We discuss several aspects of bottom-up versus top-down on-shell derivations of the HEFT and SMEFT amplitudes, highlighting in particular the simple counting of HEFT dimensions in the on-shell approach and the transparent relation between perturbative unitarity and gauge-invariance in the little-group covariant massive spinor formalism. Our results provide a formulation of Effective Field Theory analyses directly in terms of observable quantities. For terms with quadratic energy growth, we also provide the mapping to the Warsaw basis