Whole-genome analysis of introgressive hybridization and characterization of the bovine legacy of Mongolian yaks

The yak is remarkable for its adaptation to high altitude and occupies a central place in the economies of the mountainous regions of Asia. At lower elevations, it is common to hybridize yaks with cattle to combine the yak’s hardiness with the productivity of cattle. Hybrid males are sterile, however, preventing the establishment of stable hybrid populations, but not a limited introgression after backcrossing several generations of female hybrids to male yaks. Here we inferred bovine haplotypes in the genomes of 76 Mongolian yaks using high-density SNP genotyping and whole-genome sequencing. These yaks inherited ~1.3% of their genome from bovine ancestors after nearly continuous admixture over at least the last 1,500 years. The introgressed regions are enriched in genes involved in nervous system development and function, and particularly in glutamate metabolism and neurotransmission. We also identified a novel mutation associated with a polled (hornless) phenotype originating from Mongolian Turano cattle. Our results suggest that introgressive hybridization contributed to the improvement of yak management and breeding

Oligocene stratigraphy across the Eocene and Miocene boundaries in the Valley of Lakes (Mongolia)

Cenozoic sediments of the Taatsiin Gol and TaatsiinTsagaan Nuur area are rich in fossils that provide unique evidence of mammal evolution in Mongolia. The strata are intercalated with basalt flows. 40Ar/39Ar data of the basalts frame the time of sediment deposition and mammal evolution and enable a composite age chronology for the studied area. We investigated 20 geological sections and 6 fossil localities of Oligocene and early Miocene deposits from this region. Seventy fossil beds yielded more than 19,000 mammal fossils. This huge collection encompasses 175 mammal species: 50% Rodentia, 13% Eulipotyphla and Didelphomorphia, and 12% Lagomorpha. The remaining 25% of species are distributed among herbivorous and carnivorous large mammals. The representation of lower vertebrates and gastropods is comparatively poor. Several hundred SEM images illustrate the diversity of Marsupialia, Eulipotyphla, and Rodentia dentition and give insight into small mammal evolution in Mongolia during the Oligocene and early Miocene. This dataset, the radiometric ages of basalt I (∼31.5 Ma) and basalt II (∼27 Ma), and the magnetostratigraphic data provide ages of mammal assemblages and time ranges of the Mongolian biozones: letter zone A ranges from ∼33 to ∼31.5 Ma, letter zone B from ∼31.5 to ∼28 Ma, letter zone C from ∼28 to 25.6 Ma, letter zone C1 from 25.6 to 24 Ma, letter zone C1-D from 24 to ∼23 Ma, and letter zone D from ∼23 to ∼21 Ma.Open access funding provided by Austrian Science Fund (FWF). This research was supported by four projects of the Austrian Science Fund (FWF): P-10505-GEO, P-15724-N06, P-23061-N19 to G.D.-H. and a Lise Meitner grant M-1357-B17 to O.M. Travel expenses of G.D.-H. to China and Mogolia were partly covered by the Austrian Academy of Sciences.Peer Reviewe

Tectonic implications of garnet-bearing mantle xenoliths exhumed by Quaternary magmatism in the Hangay dome, central Mongolia

Garnet-bearing mantle xenoliths have been recovered from Quaternary alkali basalts, both within and peripheral to the Hangay dome of central Mongolia. Microfabric analysis and thermobaromery, combining empirical thermobarometers and the self-consistent dataset of THERMOCALC, indicate that garnet websterites from the Shavaryn-Tsaram volcanic centre at the dome core were formed in the spinel-lherzolite upper mantle at pressures of 17–18 kbars and temperatures of 1,070–1,090°C, whereas garnet lherzolites were derived from greater depths (18–20 kbars). Garnet lherzolites from the Baga Togo Uul vents near the dome edge were formed at 18–22 kbars under significantly cooler conditions (960–1,000°C). These xenoliths reveal reaction coronas of (1) orthopyroxene, clinopyroxene, plagioclase and spinel mantling garnets; (2) spongy rims of olivine replacing orthopyroxene and (3) low-Na, low-Al clinopyroxene replacing primary clinopyroxene. Trace-element abundances indicate that clinopyroxene from these coronas is in chemical equilibrium with the host magma. The thermobarometric and textural data suggest that lherzolite xenoliths from both sites were derived from depths of 60–70 km and entrained in magma at 1,200–1,300°C. The average rate of ascent, as determined by olivine zoning, lies in the range 0.2–0.3 m s?1. The contrast in thermal profiles of the upper mantle between the two sites is consistent with a mantle plume beneath the Hangay dome with elevated thermal conditions beneath the core of the dome being comparable to estimates of the Pleistocene geotherm beneath the Baikal rift

Cenozoic volcanism on the Hangai Dome, Central Mongolia: geochemical evidence for changing melt sources and implications for mechanisms of melting

Cenozoic volcanism within Mongolia forms part of a large central Asian province of intra-plate magmatism. Numerous small-volume volcanic cones and alkali basalt lava flows have been formed since c. 30 Ma; from c. 12 Ma activity has been focused on the uplifted Hangai dome. A mechanism for melting beneath the dome has, however, thus far remained enigmatic. Some of the oldest basalts on the Hangai dome erupted at its centre at ∼6 Ma and their geochemistry suggests a garnet lherzolite source region at 90–100 km depth. These lavas have Pb isotope compositions similar to those of depleted Indian mid-ocean ridge basalts (MORB) (206Pb/204Pb = 17·822, 207Pb/204Pb = 15·482, 208Pb/204Pb = 37·767), which may be indicative of the involvement of ambient asthenospheric mantle in their petrogenesis. Younger basalts exhibit a gradual shift in isotopic composition towards a source that has less radiogenic Pb and more radiogenic Sr, evidenced by the eruption of lavas with 206Pb/204Pb = 16·991 and 87Sr/86Sr = 0·704704. The youngest lavas, dated as younger than ∼8 ka, have the highest K2O contents (up to 5·2 wt %) and are characterized by the most enriched trace-element signatures; they are interpreted to represent melting of a metasomatically altered sub-continental lithospheric mantle containing phlogopite. Concurrent with progressive melting of the lithosphere, melting appears to propagate outwards from the centre of the dome to its margins; by 0·7 Ma the marginal magmatism is interpreted to result from melting of a depleted MORB-source mantle component with a smaller contribution from the lithospheric mantle. The spatial and temporal variations in melting beneath the Hangai dome may be explained by either lithospheric delamination or the presence of a small-scale thermal anomaly in the upper mantle. Although it is not possible to distinguish between these models on the basis of geochemistry alone, the lack of a viable mechanism to generate small-scale upwelling lends support to a model involving delamination of the lithospheric mantle beneath the Hangai dome