Assessing thornback ray growth pattern in different areas of Western-Central Mediterranean Sea through a Multi-Model Inference analysis

The lack of information on age validation often affects ageing studies in cartilaginous fish, even in the most common species. Recently, the annual growth band deposition pattern has been directly validated for thornback ray in the Mediterranean Basin, thus providing a highly reliable protocol for age reading. In this regard, taking advantage of this new information, the present study aims to investigate this species growth for the first time over a wide area of the Western and Central Mediterranean Sea, involving four different FAO geographic sub-areas. In order to provide an accurate description of the species growth, different models were fitted to the age-length data obtained from the observation of vertebral centra thin sections. A total of 720 specimens were analysed (358 females and 362 males) with total length ranging between 11.5 and 86.4 cm. The corrected Akaike's Information criterion (AICc) indicated, among the tested models, the three-parameter von Bertalanffy function as the most robust in describing the species growth. Growth modelling outcomes revealed the thornback rays as capable of growing relatively fast during the first years; the growth rate gradually slows down allowing maximum sizes of about 90–100 cm in total length to be reached. Significant discrepancies in the growth pattern were found between sexes in all investigated areas with the only exception being in the Northern Tyrrhenian Sea. Differences in growth patterns were observed between areas, specifically in the estimated growth rate of the species for each sub-region. The present study, confirmed the importance of the availability of a validated ageing protocol and testing multiple growth models. Moreover, our results highlighted the urgent need to investigate a species growth in a wide geographic area, searching also for possible differences at sub-region level. Providing this information could indeed allow eventual management plans to be adapted to the exact growth pattern that the species exhibit in the region, in this way increasing their effectiveness

Assessing fish–fishery dynamics from a spatially explicit metapopulation perspective reveals winners and losers in fisheries management

Sustainable management of living resources must reconcile biodiversity conservation and socioeconomic viability of human activities. In the case of fisheries, sustainable management design is made challenging by the complex spatiotemporal interactions between fish and fisheries. We develop a comprehensive metapopulation framework integrating data on species life-history traits, connectivity and habitat distribution to identify priority areas for fishing regulation and assess how management impacts are spatially distributed. We trial this approach on European hake fisheries in the north-western Mediterranean, where we assess area-based management scenarios in terms of stock status and fishery productivity to prioritize areas for protection. Model simulations show that local fishery closures have the potential to enhance both spawning stock biomass and landings on a regional scale compared to a status quo scenario, but that improving protection is easier than increasing productivity. Moreover, the interaction between metapopulation dynamics and the redistribution of fishing effort following local closures implies that benefits and drawbacks are heterogeneously distributed in space, the former being concentrated in the proximity of the protected site. A network analysis shows that priority areas for protection are those with the highest connectivity (as expressed by network metrics) if the objective is to improve the spawning stock, while no significant relationship emerges between connectivity and potential for increased landings. Synthesis and applications. Our framework provides a tool for (1) assessing area-based management measures aimed at improving fisheries outcomes in terms of both conservation and socioeconomic viability and (2) describing the spatial distribution of costs and benefits, which can help guide effective management and gain stakeholder support. Adult dispersal remains the main source of uncertainty that needs to be investigated to effectively apply our model to fisheries regulation

Anisakid and Raphidascaridid parasites in Trachurus trachurus: infection drivers and possible effects on the host’s condition

This study investigated the distribution of nematode larvae of Anisakidae and Raphidascarididae (genera Anisakis and Hysterothylacium) in Trachurus trachurus (Linnaeus, 1758) in the Ligurian and central-northern Tyrrhenian Seas. The relationship between the number of parasites and the length and weight parameters of the fish was assessed, and the possible effect of the parasites on the condition factor was evaluated. A total of 190 T. trachurus specimens were collected in July 2019. Parasites were found in 70 individuals. A total of 161 visible larvae were collected in the viscera. Morphological analysis revealed the presence of Anisakis spp. in 55 fish and Hysterothylacium spp. in 15 fish, while 5 fish showed coinfection with both genera. The specimens subjected to PCR (n = 67) showed that 85% of the Anisakis larvae analyzed belonged to the species A. pegreffii, while the remaining 15% belonged to hybrids of A. pegreffii-A. simplex (s.s.). A total of 58% (n = 7) of the Hysterothylacium larvae analyzed belonged to the species H. fabri, while 42% belonged to the species H. aduncum. Our results support the hypothesis that infection with these parasites does not affect the condition of the fish host analyzed, and that body size and depth are major drivers in determining infection levels with Anisakid and Raphidascaridid nematodes

Identifying Persistent Hot Spot Areas of Undersized Fish and Crustaceans in Southern European Waters: Implication for Fishery Management Under the Discard Ban Regulation

The recent establishment of the “landing obligation” under the reformed EU Common Fishery Policy has the twofold objective of reducing the excessive practice of discarding unwanted catch at sea and encouraging more selective and sustainable fisheries. Within this context, the awareness of the spatial distribution of potential unwanted catches is important for devising management measures aimed to decrease discards. This study analyzed the distribution of Hot Spot density areas of demersal fish and crustaceans below the Minimum Conservation Reference Size (MCRS) in four different southern European seas: continental Portuguese coast, Catalan Sea, South of Sicily, Liguria and northern Tyrrhenian Seas using both bottom trawl survey data and information on the spatial distribution of commercial fisheries. Critical areas for discarding were identified as zones where the highest densities of individuals below MCRS were consistently recorded throughout a series of years. Results clearly showed a patchy distribution of undersized individuals in each investigated area, highlighting the overlap between high density patches of both discards and fishing effort. The present findings provide a relevant knowledge for supporting the application of spatial-based management actions, such as the designation of Fisheries Restricted Areas (FRAs), in order to minimize the by-catch of undersized specimens and improve the sustainability of demersal fisheries

The structure of Herpesvirus Fusion Glycoprotein B-Bilayer Complex reveals the protein-membrane and lateral protein-protein interaction

Glycoprotein B (gB) is a key component of the complex herpesvirus fusion machinery. We studied membrane interaction of two gB ectodomain forms and present an electron cryotomography structure of the gB-bilayer complex. The two forms differed in presence or absence of the membrane proximal region (MPR) but showed an overall similar trimeric shape. The presence of the MPR impeded interaction with liposomes. In contrast, the MPR-lacking form interacted efficiently with liposomes. Lateral interaction resulted in coat formation on the membranes. The structure revealed that interaction of gB with membranes was mediated by the fusion loops and limited to the outer membrane leaflet. The observed intrinsic propensity of gB to cluster on membranes indicates an additional role of gB in driving the fusion process forward beyond the transient fusion pore opening and subsequently leading to fusion pore expansion

Inner tegument protein pUL37 of herpes simplex virus type 1 is involved in directing capsids to the trans-Golgi network for envelopment

Secondary envelopment of herpes simplex virus type 1 has been demonstrated as taking place at the trans-Golgi network (TGN). The inner tegument proteins pUL36 and pUL37 and the envelope glycoproteins gD and gE are known to be important for secondary envelopment. We compared the cellular localizations of capsids from a virus mutant lacking the UL37 gene with those of a virus mutant lacking the genes encoding gD and gE. Although wild-type capsids accumulated at the TGN, capsids of the pUL37− mutant were distributed throughout the cytoplasm and showed no association with TGN-derived vesicles. This was in contrast to capsids from a gD−gE− mutant, which accumulated in the vicinity of TGN vesicles, but did not colocalize with them, suggesting that they were transported to the TGN but were unable to undergo envelopment. We conclude that the inner tegument protein pUL37 is required for directing capsids to the TGN, where secondary envelopment occurs

Western Irish Sea Nephrops Grounds (FU15) 2013 UWTV Survey Report and catch options for 2014

Use the URI link below to search the Marine Institute Data Discovery Catalogue for datasets relevant to this report.This report provides the main results and findings of the eleventh annual underwater television survey on the ‘Irish sea west Nephrops grounds’ ICES assessment area, Functional Unit 15. The survey was multi-disciplinary in nature collecting UWTV and other ecosystem data. The 2013 design consisted of a randomised isometric grid of 80 stations at 5 nautical mile intervals out over the full known extent the stock. The resulting krigged burrow abundance estimate was 4.3 billion burrows. This was a 16% decrease relative to 2012. The spatial distribution shows higher abundance in the south of the area and a larger decline in abundance is apparent in the North. Overall densities remain high and abundance remains relatively stable, well above MSY Btrigger. Reducing the number of stations in 2013 is not expected to have significantly affected the accuracy of the survey estimate. The CV (or relative standard error) of 3% is in line with previous estimates and well below the upper limit of 20% recommended by SGNEPS 2012. Total catches and landings options at various different fishing mortalities were calculated and fishing at Fmsy in 2014 implies a total catch option at Fmsy (=Fmax) of 9,914 tonnes which results in landings of no more than 8,244 tonnes. The only sea-pen species observed in 2013 was Virgularia mirabilis and the frequency of occurrence was lower than in 2012. Trawl marks were noted at 43% of the UWTV stations

STECF Evaluation of Fisheries Dependent Information (STECF-15-12)

STEC

STECF Evaluation of Fishing Effort Regimes in European Waters - Part 2 (STECF-14-20)

DG MAR