15,921 research outputs found
Increased Occurrence of Record-Wet and Record-Dry Months Reflect Changes in Mean Rainfall
Climate change alters the hydrological cycle, which is expected to increase the risk of heavy rainfall events and prolonged droughts. Sparse rainfall data, however, have made it difficult to answer the question of whether robust changes can already be seen in the short observational time period. Here we use a comprehensive statistical tool to quantify changes in record-breaking wet and dry months. The global-mean number of record-wet months has significantly increased over the recent decades and is now nearly 20% higher than would be expected in a stationary climate with no long-term trends. This signal primarily comes from pronounced changes in the northern middle to high latitudes where the occurrence of record-wet months has increased by up to 37% regionally. The tropics have seen opposing trends: More record-wet months in Southeast Asia in contrast to more record-dry months in Africa. These changes are broadly consistent with observed trends in mean rainfall
Carbon storage and DNA absorption in allophanic soils and paleosols
Andisols and andic paleosols dominated by the nanocrystalline mineral allophane sequester large amounts of carbon (C), attributable mainly to its chemical bonding with charged hydroxyl groups on the surface of allophane together with its physical protection in nanopores within and between allophane nanoaggregates. C near-edge X-ray absorption fine structure (NEXAFS) spectra for a New Zealand Andisol (Tirau series) showed that the organic matter (OM) mainly comprises quinonic, aromatic, aliphatic, and carboxylic C. In different buried horizons from several other Andisols, C contents varied but the C species were similar, attributable to pedogenic processes operating during developmental upbuilding, downward leaching, or both. The presence of OM in natural allophanic soils weakened the adsorption of DNA on clay; an adsorption isotherm experiment involving humic acid (HA) showed that HA-free synthetic allophane adsorbed seven times more DNA than HA-rich synthetic allophane. Phosphorus X-ray absorption near-edge structure (XANES) spectra for salmonsperm DNA and DNA-clay complexes indicated that DNA was bound to the allophane clay through the phosphate group, but it is not clear if DNA was chemically bound to the surface of the allophane or to OM, or both. We plan more experiments to investigate interactions among DNA, allophane (natural and synthetic), and OM. Because DNA shows a high affinity to allophane, we are studying the potential to reconstruct late Quaternary palaeoenvironments by attempting to extract and characterise ancient DNA from allophanic paleosol
Reversible cerebral ischemia in patients with pheochromocytoma
Cerebral ischemia and symptoms of stroke can occur as a rare manifestation in patients with pheochromocytoma. We describe a 45-year-old woman who was admitted because of a right-sided hemiparesis due to an ischemic lesion in the left hypothalamus. The clinical diagnosis of a pheochromocytoma was proven by highly elevated urinary catecholamines and confirmed histologically after operation. The successful removal of the tumor led to the almost complete recovery of the neurological deficiencies. It is of vital importance to know this atypical presentation of pheochromocytoma. The diagnosis of pheochromocytoma should be suspected in patients with focal cerebral symptoms, particularly in the presence of intermittent hypertension or other paroxysmal symptoms suggestive of pheochromocytom
Coulomb blockade effects in driven electron transport
We study numerically the influence of strong Coulomb repulsion on the current
through molecular wires that are driven by external electromagnetic fields. The
molecule is described by a tight-binding model whose first and last site is
coupled to a respective lead. The leads are eliminated within a perturbation
theory yielding a master equation for the wire. The decomposition into a
Floquet basis enables an efficient treatment of the driving field. For the
electronic excitations in bridged molecular wires, we find that strong Coulomb
repulsion significantly sharpens resonance peaks which broaden again with
increasing temperature. By contrast, Coulomb blockade has only a small
influence on effects like non-adiabatic electron pumping and coherent current
suppression.Comment: 9 pages, 7 figures. Added a plot for temperature dependence of
resonance peaks. Published versio
SynBlast: Assisting the Analysis of Conserved Synteny Information
Motivation:
In the last years more than 20 vertebrate genomes have been sequenced, and the rate at which genomic DNA information becomes available is rapidly accelerating. Gene duplication and gene loss events
inherently limit the accuracy of orthology detection based on sequence similarity alone. Fully automated methods for orthology annotation do exist but often fail to identify individual members in cases of large gene families, or to distinguish missing data from traceable gene losses. This situation can be improved in many cases by including conserved synteny information.
Results:
Here we present the SynBlast pipeline that is designed to construct and evaluate local synteny information. SynBlast uses the genomic region around a focal reference gene to retrieve candidates for homologous regions from a collection of target genomes and ranks them in accord with the available evidence for homology. The pipeline is intended as a tool to aid high quality manual annotation in particular in those cases where automatic procedures fail. We demonstrate how SynBlast is applied to retrieving orthologous and paralogous clusters using the vertebrate Hox and ParaHox clusters as examples
Recommended from our members
Potential for Early Forecast of Moroccan Wheat Yields Based on Climatic Drivers
Wheat production plays an important role in Morocco. Current wheat forecast systems use weather and vegetation data during the crop growing phase, thus limiting the earliest possible release date to early spring. However, Morocco's wheat production is mostly rainfed and thus strongly tied to fluctuations in rainfall, which in turn depend on slowly evolving climate dynamics. This offers a source of predictability at longer time scales. Using physically guided causal discovery algorithms, we extract climate precursors for wheat yield variability from gridded fields of geopotential height and sea surface temperatures which show potential for accurate yield forecasts already in December, with around 50% explained variance in an out-of-sample cross validation. The detected interactions are physically meaningful and consistent with documented ocean-atmosphere feedbacks. Reliable yield forecasts at such long lead times could provide farmers and policy makers with necessary information for early action and strategic adaptation measurements to support food security. ©2020. The Authors
Structural and functional conservation of the human homolog of the Schizosaccharomyces pombe rad2 gene, which is required for chromosome segregation and recovery from DNA damage
The rad2 mutant of Schizosaccharomyces pombe is sensitive to UV irradiation and deficient in the repair of UV damage. In addition, it has a very high degree of chromosome loss and/or nondisjunction. We have cloned the rad2 gene and have shown it to be a member of the Saccharomyces cerevisiae RAD2/S. pombe rad13/human XPG family. Using degenerate PCR, we have cloned the human homolog of the rad2 gene. Human cDNA has 55% amino acid sequence identity to the rad2 gene and is able to complement the UV sensitivity of the rad2 null mutant. We have thus isolated a novel human gene which is likely to be involved both in controlling the fidelity of chromosome segregation and in the repair of UV-induced DNA damage. Its involvement in two fundamental processes for maintaining chromosomal integrity suggests that it is likely to be an important component of cancer avoidance mechanisms
A quantitative analysis of measures of quality in science
Condensing the work of any academic scientist into a one-dimensional measure
of scientific quality is a difficult problem. Here, we employ Bayesian
statistics to analyze several different measures of quality. Specifically, we
determine each measure's ability to discriminate between scientific authors.
Using scaling arguments, we demonstrate that the best of these measures require
approximately 50 papers to draw conclusions regarding long term scientific
performance with usefully small statistical uncertainties. Further, the
approach described here permits the value-free (i.e., statistical) comparison
of scientists working in distinct areas of science.Comment: 11 pages, 8 figures, 4 table
- …