Using a genetic algorithm to optimize a data-limited catch rule

Many data-limited fish stocks worldwide require management advice. Simple empirical management procedures have been used to manage data-limited fisheries but do not necessarily ensure compliance with maximum sustainable yield objectives and precautionary principles. Genetic algorithms are efficient optimization procedures for which the objectives are formalized as a fitness function. This optimization can be included when testing management procedures in a management strategy evaluation. This study explored the application of a genetic algorithm to an empirical catch rule and found that this approach could substantially improve the performance of the catch rule. The optimized parameterization and the magnitude of the improvement were dependent on the specific stock, stock status, and definition of the fitness function. The genetic algorithm proved to be an efficient and automated method for tuning the catch rule and removed the need for manual intervention during the optimization process. Therefore, we conclude that the approach could also be applied to other management procedures, case-specific tuning, and even data-rich stocks. Finally, we recommend the phasing out of the current generic ICES “2 over 3” advice rule in favour of case-specific catch rules of the form tested here, although we caution that neither works well for fast-growing stocks

Exploring a relative harvest rate strategy for moderately data-limited fisheries management

Moderately data-limited fisheries can be managed with simple empirical management procedures without analytical stock assessments. Often, control rules adjust advised catches by the trend of an abundance index. We explored an alternative approach where a relative harvest rate, defined by the catch relative to a biomass index, is used and the target level derived from analysing historical catch length data. This harvest rate rule was tested generically with management strategy evaluation. A genetic algorithm was deployed as an optimisation procedure to tune the parameters of the control rule to meet maximum sustainable yield and precautionary management objectives. Results indicated that this method could outperform trend-based strategies, particularly when optimised, achieving higher long-term yields while remaining precautionary. However, optimum harvest rate levels can be narrow and challenging to find because they depend on historical exploitation and life history characteristics. Misspecification of target levels can have a detrimental impact on management. Nevertheless, harvest rates appear to be a suitable management option for moderately data-limited resources, and their application has modest data requirements. Harvest rate strategies are especially suitable for stocks for which case-specific analyses can be conducted

Risk equivalence in data-limited and data-rich fisheries management: An example based on the ICES advice framework

Fisheries management needs to ensure that resources are exploited sustainably, and the risk of depletion is at an acceptable level. However, often uncertainty about resource dynamics exists, and data availability may differ substantially between fish stocks. This situation can be addressed through tiered systems, where tiers represent different data limitations, and tier-specific stock assessment methods are defined, aiming for risk equivalence across tiers. As case studies, we selected stocks of European plaice, Atlantic cod and Atlantic herring, where advice is provided by the International Council for the Exploration of the Sea (ICES). We conducted a closed-loop simulation to compare risk equivalence between the data-rich ICES MSY rule, based on a quantitative stock assessment, and the revised data-limited empirical management procedures of the ICES advice framework. The simulations indicated that the data-limited approaches were precautionary and did not lead to a higher risk of depletion than the data-rich approach. Although the catch based on generic data-limited approaches was lower, stock-specific optimisation improved management performance with catch levels comparable with the data-rich approach. Furthermore, the simulation indicated the ICES MSY rule can fail to meet management objectives due to increased depletion risk when management reference points are set suboptimally. We conclude that the recent revisions of the ICES system explicitly account for risk equivalence for data-limited fisheries management and are a major step forward. Finally, we advocate further consideration of simple empirical management procedures irrespective of data limitations due to their ability to meet fisheries management objectives with greater simplicity

MAPPING DECIDUOUS FORESTS BY USING TIME SERIES OF FILTERED MODIS NDVI AND NEURAL NETWORKS

Multi-temporal images are now of standard use in remote sensing of vegetation during monitoring and classification. Temporal vegetation signatures (i. e., vegetation indices as functions of time) generated, poses many challenges, primarily due to signal to noise-related issues. This study investigates which methods generate the most appropriate smoothed curves of vegetation signatures on MODIS NDVI time series. The filtering techniques compared were the HANTS algorithm which is based on Fourier analyses and Wavelet temporal algorithm which uses the wavelet analysis to generate the smoothed curves. The study was conducted in four different regions of the Minas Gerais State. The smoothed data were used as input data vectors for vegetation classification by means of artificial neural networks for comparison purpose. A comparison of the results was ultimately discussed in this work showing encouraging results and similarity between the two filtering techniques used.16212313

RESTABELECIMENTO ESTÉTICO DE UM DENTE ESCURECIDO: POSSIBILIDADES E DESAFIOS

O  restabelecimento  estético  de  um  dente  escurecido  para  a manutenção de um sorriso harmônico constitui um desafio para a odontologia restauradora.  A  escolha  do  método  restaurador  que  deverá  ser  utilizado depende  de  uma  anamnese  apurada,  observação  clínica  e  bom  senso  do cirurgião  dentista

Dietary Supplementation with Soluble Plantain Non-Starch Polysaccharides Inhibits Intestinal Invasion of Salmonella Typhimurium in the Chicken

Soluble fibres (non-starch polysaccharides, NSP) from edible plants but particularly plantain banana (Musa spp.), have been shown in vitro and ex vivo to prevent various enteric pathogens from adhering to, or translocating across, the human intestinal epithelium, a property that we have termed contrabiotic. Here we report that dietary plantain fibre prevents invasion of the chicken intestinal mucosa by Salmonella. In vivo experiments were performed with chicks fed from hatch on a pellet diet containing soluble plantain NSP (0 to 200 mg/d) and orally infected with S.Typhimurium 4/74 at 8 d of age. Birds were sacrificed 3, 6 and 10 d post-infection. Bacteria were enumerated from liver, spleen and caecal contents. In vitro studies were performed using chicken caecal crypts and porcine intestinal epithelial cells infected with Salmonella enterica serovars following pre-treatment separately with soluble plantain NSP and acidic or neutral polysaccharide fractions of plantain NSP, each compared with saline vehicle. Bacterial adherence and invasion were assessed by gentamicin protection assay. In vivo dietary supplementation with plantain NSP 50 mg/d reduced invasion by S.Typhimurium, as reflected by viable bacterial counts from splenic tissue, by 98.9% (95% CI, 98.1–99.7; P<0.0001). In vitro studies confirmed that plantain NSP (5–10 mg/ml) inhibited adhesion of S.Typhimurium 4/74 to a porcine epithelial cell-line (73% mean inhibition (95% CI, 64–81); P<0.001) and to primary chick caecal crypts (82% mean inhibition (95% CI, 75–90); P<0.001). Adherence inhibition was shown to be mediated via an effect on the epithelial cells and Ussing chamber experiments with ex-vivo human ileal mucosa showed that this effect was associated with increased short circuit current but no change in electrical resistance. The inhibitory activity of plantain NSP lay mainly within the acidic/pectic (homogalacturonan-rich) component. Supplementation of chick feed with plantain NSP was well tolerated and shows promise as a simple approach for reducing invasive salmonellosis

Influences on gum feeding in primates

This chapter reviews the factors that may affect patterns of gum feeding by primates. These are then examined for mixed-species troops of saddleback (S. fuscicollis) and mustached (S. mystax) tamarins. An important distinction is made between gums produced by tree trunks and branches as a result of damage and those produced by seed pods as part of a dispersal strategy as these may be expected to differ in their biochemistry. Feeding on fruit and Parkia seed pod exudates was more prevalent in the morning whereas other exudates were eaten in the afternoon. This itinerary may represent a deliberate strategy to retain trunk gums in the gut overnight, thus maximising the potential for microbial fermentation of their β-linked oligosaccharides. Both types of exudates were eaten more in the dry than the wet season. Consumption was linked to seasonal changes in resource availability and not the tamarins’ reproductive status pro-viding no support for the suggestion that gums are eaten as a pri-mary calcium source in the later stages of gestation and lactation. The role of availability in determining patterns of consumption is further supported by the finding that dietary overlap for the trunk gums eaten was greater between species within mixed-species troops within years than it was within species between years. These data and those for pygmy marmosets (Cebuella pygmaea) suggest that patterns of primate gummivory may reflect the interaction of prefer-ence and availability for both those able to stimulate gum production and those not