Note C 16 ±C 29 homologous series of monomethylalkanes in the pyrolysis products of a Holocene microbial mat

Abstract Preparative open pyrolysis products of kerogen isolated from a Holocene microbial mat collected in Abu Dhabi (United Arab Emirates) contain homologous series of monomethylalkanes (MMAs, C 16 ±C 29 ). The isomer and carbon number distributions of these branched alkanes closely match those of MMAs in ancient sediments and oils. It is proposed that monomethylalkanes in oils and in thermally mature ancient sediments derive from non-extractable organic matter produced by one or more members of the cyanobacterial assemblage, eubacterial primary producers and/or heterotrophic bacteria.

Perchlorate and Volatiles of the Brine of Lake Vida (Antarctica): Implication for the in Situ Analysis of Mars Sediments

The cold (-13.4 C), cryoencapsulated, anoxic, interstitial brine of the 27 m-thick ice of Lake Vida (Victoria Valley, Antarctica) contains 49 microgram L-1 of perchlorate and 11 microgram L-1 of chlorate. Lake Vida brine (LVBr) may provide an analog for potential oxychlorine-rich subsurface brine on Mars. LVBr volatiles were analyzed by solid-phase microextraction (SPME) gas chromatography-mass spectrometry (GC-MS) with two different SPME fibers. With the exception of volatile organic sulfur compounds, most other volatiles observed were artifacts produced in the GC injector when the thermal decomposition products of oxychlorines reacted with reduced carbon derived from LVBr and the SPME fiber phases. Analysis of MilliQ water with perchlorate (40 microgram L-1) showed low level of organic artifacts, reflecting carbon limitation. In order to observe sample-derived organic compounds, both in analog samples and on Mars, the molar abundance of reduced carbon in a sample must exceed those of O2 and Cl2 produced during decomposition of oxychlorines. This suggests that the abundance of compounds observed by the Sample Analysis at Mars (SAM) instruments in Sheepbed samples (CB-3, CB5, and CB6) may be controlled by an increase in the reduced-carbon/oxychlorine ratio of these samples. To increase chances of in situ detection of Martian organics during pyrolysis-GC-MS, we propose that the derivatization agents stored on SAM may be used as an external source of reduced carbon, increasing artificially the reduced-carbon to perchlorate ratio during pyrolysis, allowing the expression of more abundant and perhaps more diverse Martian organic matter

Biological functions at high pressure: transcriptome response of Shewanella oneidensis MR-1 to hydrostatic pressure relevant to Titan and other icy ocean worlds

High hydrostatic pressure (HHP) is a key driver of life's evolution and diversification on Earth. Icy moons such as Titan, Europa, and Enceladus harbor potentially habitable high-pressure environments within their subsurface oceans. Titan, in particular, is modeled to have subsurface ocean pressures ≥ 150 MPa, which are above the highest pressures known to support life on Earth in natural ecosystems. Piezophiles are organisms that grow optimally at pressures higher than atmospheric (0.1 MPa) pressure and have specialized adaptations to the physical constraints of high-pressure environments – up to ~110 MPa at Challenger Deep, the highest pressure deep-sea habitat explored. While non-piezophilic microorganisms have been shown to survive short exposures at Titan relevant pressures, the mechanisms of their survival under such conditions remain largely unelucidated. To better understand these mechanisms, we have conducted a study of gene expression for Shewanella oneidensis MR-1 using a high-pressure experimental culturing system. MR-1 was subjected to short-term (15 min) and long-term (2 h) HHP of 158 MPa, a value consistent with pressures expected near the top of Titan's subsurface ocean. We show that MR-1 is metabolically active in situ at HHP and is capable of viable growth following 2 h exposure to 158 MPa, with minimal pressure training beforehand. We further find that MR-1 regulates 264 genes in response to short-term HHP, the majority of which are upregulated. Adaptations include upregulation of the genes argA, argB, argC, and argF involved in arginine biosynthesis and regulation of genes involved in membrane reconfiguration. MR-1 also utilizes stress response adaptations common to other environmental extremes such as genes encoding for the cold-shock protein CspG and antioxidant defense related genes. This study suggests Titan's ocean pressures may not limit life, as microorganisms could employ adaptations akin to those demonstrated by terrestrial organisms

Analysis of unresolved complex mixtures of hydrocarbons extracted from Late Archean sediments by comprehensive two-dimensional gas chromatography (GC×GC)

Author Posting. © Elsevier B.V., 2008. This is the author's version of the work. It is posted here by permission of Elsevier B.V. for personal use, not for redistribution. The definitive version was published in Organic Geochemistry 39 (2008): 846-867, doi:10.1016/j.orggeochem.2008.03.006.Hydrocarbon mixtures too complex to resolve by traditional capillary gas chromatrography display gas chromatograms with dramatically rising baselines or “humps” of coeluting compounds that are termed unresolved complex mixtures (UCMs). Because the constituents of UCMs are not ordinarily identified, a large amount of geochemical information is never explored. Gas chromatograms of saturated/unsaturated hydrocarbons extracted from Late Archean argillites and greywackes of the southern Abitibi Province of Ontario, Canada contain UCMs with different appearances or “topologies” relating to the intensity and retention time of the compounds comprising the UCMs. These topologies appear to have some level of stratigraphic organization, such that samples collected at any stratigraphic formation collectively are dominated by UCMs that either elute early- (within a window of C15-C20 of n-alkanes), early- to mid- (C15-C30 of n-alkanes), or have a broad UCM that extends through the entire retention time of the sample (from C15-C42 of n-alkanes). Comprehensive two-dimensional gas chromatography time-of-flight mass spectrometry (GC×GC-MS) was used to resolve the constituents forming these various UCMs. Early- to mid- eluting UCMs are dominated by configurational isomers of alkyl-substituted and non substituted polycyclic compounds that contain up to six rings. Late eluting UCMs are composed of C36-C40 mono-, bi-, and tricyclic archaeal isoprenoid diastereomers. Broad UCMs spanning the retention time of compound elution contain nearly the same compounds observed in the early-, mid-, and late retention time UCMs. Although the origin of the polycyclic compounds is unclear, the variations in the UCM topology appear to depend on the concentration of initial compound classes that have the potential to become isomerized. Isomerization of these constituents may have resulted from hydrothermal alteration of organic matter.This project was supported by NASA Exobiology grant #NAG5-13446 to Fabien Kenig. GC×GC analysis was supported by NSF grant IIS-0430835 and the Seaver Foundation to Christopher M. Reddy. Preparation of the archaeal biphytane standard was supported by NSF grant ARC-0520226 to Benjamin Van Mooy

Sedimentation, distribution et diagenese de la matiere organique dans un environnement carbonate hypersalin, le systeme lagune-sabkha d'Abu Dhabi (E.A.U.)

SIGLEAvailable from INIST (FR), Document Supply Service, under shelf-number : T 82422 / INIST-CNRS - Institut de l'Information Scientifique et TechniqueFRFranc

Comment on “Evaluation of the Tenax Trap in the Sample Analysis at Mars Instrument Suite on the Curiosity Rover as a Potential Hydrocarbon Source for Chlorinated Organics Detected in Gale Crater” by Miller et al. (2015)

Miller et al. [2015, https://doi.org/10.1002/2015JE004825] described the result of experiments testing the potential of Tenax TA, a polymer used on Sample Analysis at Mars (SAM), as a source of chlorinated benzene. Miller et al. [2015] conclude that the amount of chlorobenzene produced is low and that Tenax TA cannot be the source of the chlorobenzene observed on Mars by SAM. Miller et al. [2015] did not provide the identification of two unknown compounds produced during these pyrolysis experiments, though their abundance is orders of magnitude higher than that of chlorobenzene. Here, we tentatively identify these compounds based on the mass spectra provided by Miller et al. [2015], the most abundant of which is a chlorinated monomer of Tenax TA. This chlorinated monomer is likely to accumulate in the hydrocarbon Tenax trap and in the transfer line between the trap and the mass spectrometer. Further breakdown of these compounds could lead the high background of chlorobenzene observed on Mars

Palaeoenvironmental implications derived from a piston core from east lobe Bonney, Taylor Valley, Antarctica

A 270 cm long sediment sequence was recovered with a piston corer from east lobe Bonney Taylor Valley Antarctica and characterized according to its sedimentological mineralogical and geochemical properties It is the first record of such length recovered from east lobe Bonney The sediment core is mainly composed of halite crystals of different sizes water and a relatively low and stable proportion of elastic particles Although the sediment surface was probably disturbed by the coring process and absence or low contents of organic material or carbonates hampers the establishment of a robust chronology by radiocarbon dating the core probably contains at least several hundred years of information about the history of the lake and the Bonney basin Variations in halite crystal sizes and amount as well as variations in the composition of elastic material can be related to past lake level changes and evaporation cycle

Sedimentology and age on profile Lz1023

A 270 cm long sediment sequence was recovered with a piston corer from east lobe Bonney, Taylor Valley, Antarctica, and characterized according to its sedimentological, mineralogical, and geochemical properties. It is the first record of such length recovered from east lobe Bonney. The sediment core is mainly composed of halite crystals of different sizes, water, and a relatively low and stable proportion of clastic particles. Although the sediment surface was probably disturbed by the coring process and absence or low contents of organic material or carbonates hampers the establishment of a robust chronology by radiocarbon dating, the core probably contains at least several hundred years of information about the history of the lake and the Bonney basin. Variations in halite crystal sizes and amount as well as variations in the composition of clastic material can be related to past lake level changes and evaporation cycles

DETERMINING TAPHONOMIC CONTROLS AND RATES OF DECAY IN CAVE ENVIRONMENTS USING MICROCOSMS

Caves are important sites of fossil preservation, especially for Quaternary vertebrates. Taphonomic processes operating in caves are not well understood and have never been experimentally examined. This study focuses on the potential role of bat guano, which impacts environmental biogeochemistry and serves as the base of the food chain in cave ecosystems. The presence or absence of guano is expected to be a major control of preservation potential in caves. Bats first appear in the fossil record in the early Eocene so bat guano likely influenced cave preservation only during the Cenozoic. This is a probable megabias of the cave fossil record. Microcosm experiments were used to determine the impact of guano presence and composition, moisture, temperature, and time on preservation potential of small mammal bones, leaves, and crickets. Guano came from insectivorous and frugivorous bats. The guano of insectivorous bats has an acidic pH, while the guano of frugivorous bats is close to neutral. Lab studies were supplemented with field experiments at Crumps Cave, Kentucky. Leaves and crickets were better preserved in the guano of insectivorous bats, while bones showed recrystallization after burial. Leaves and crickets buried in the guano of frugivorous bats were quickly colonized by fungi and mostly destroyed, while only a few bones showed signs of fungus and degradation. Microcosms with a higher moisture content showed greater degradation, while time and temperature had less of an effect. Bones buried in both types of guano decayed much more rapidly than in sand. Bones buried in situ in cave sediments showed little degradation over three months. These results provide insight into the variable impact of environmental conditions on the taphonomy of Quaternary vertebrates and plants