Min-oscillations in Escherichia coli induced by interactions of membrane-bound proteins

During division it is of primary importance for a cell to correctly determine the site of cleavage. The bacterium Escherichia coli divides in the center, producing two daughter cells of equal size. Selection of the center as the correct division site is in part achieved by the Min-proteins. They oscillate between the two cell poles and thereby prevent division at these locations. Here, a phenomenological description for these oscillations is presented, where lateral interactions between proteins on the cell membrane play a key role. Solutions to the dynamic equations are compared to experimental findings. In particular, the temporal period of the oscillations is measured as a function of the cell length and found to be compatible with the theoretical prediction.Comment: 17 pages, 5 figures. Submitted to Physical Biolog

Signatures of Majorana Kramers pairs in superconductor-Luttinger liquid and superconductor-quantum dot-normal lead junctions

Time-reversal invariant topological superconductors are characterized by the presence of Majorana Kramers pairs localized at defects. One of the transport signatures of Majorana Kramers pairs is the quantized differential conductance of $4e^2/h$ when such a one-dimensional superconductor is coupled to a normal-metal lead. The resonant Andreev reflection, responsible for this phenomenon, can be understood as the boundary condition change for lead electrons at low energies. In this paper, we study the stability of the Andreev reflection fixed point with respect to electron-electron interactions in the Luttinger liquid. We first calculate the phase diagram for the Luttinger liquid-Majorana Kramers pair junction and show that its low-energy properties are determined by Andreev reflection scattering processes in the spin-triplet channel, i.e. the corresponding Andreev boundary conditions are similar to that in a spin-triplet superconductor - normal lead junction. We also study here a quantum dot coupled to a normal lead and a Majorana Kramers pair and investigate the effect of local repulsive interactions leading to an interplay between Kondo and Majorana correlations. Using a combination of renormalization group analysis and slave-boson mean-field theory, we show that the system flows to a new fixed point which is controlled by the Majorana interaction rather than the Kondo coupling. This Majorana fixed point is characterized by correlations between the localized spin and the fermion parity of each spin sector of the topological superconductor. We investigate the stability of the Majorana phase with respect to Gaussian fluctuations.Comment: 26 pages, 8 figure

Constraints on the Existence of Chiral Fermions in Interacting Lattice Theories

It is shown that an interacting theory, defined on a regular lattice, must have a vector-like spectrum if the following conditions are satisfied: (a)~locality, (b)~relativistic continuum limit without massless bosons, and (c)~pole-free effective vertex functions for conserved currents. The proof exploits the zero frequency inverse retarded propagator of an appropriate set of interpolating fields as an effective quadratic hamiltonian, to which the Nielsen-Ninomiya theorem is applied.Comment: LaTeX, 9 pages, WIS--93/56--JUNE--P

Non-adiabatic Effects in the Dissociation of Oxygen Molecules at the Al(111) Surface

The measured low initial sticking probability of oxygen molecules at the Al(111) surface that had puzzled the field for many years was recently explained in a non-adiabatic picture invoking spin-selection rules [J. Behler et al., Phys. Rev. Lett. 94, 036104 (2005)]. These selection rules tend to conserve the initial spin-triplet character of the free O2 molecule during the molecule's approach to the surface. A new locally-constrained density-functional theory approach gave access to the corresponding potential-energy surface (PES) seen by such an impinging spin-triplet molecule and indicated barriers to dissociation which reduce the sticking probability. Here, we further substantiate this non-adiabatic picture by providing a detailed account of the employed approach. Building on the previous work, we focus in particular on inaccuracies in present-day exchange-correlation functionals. Our analysis shows that small quantitative differences in the spin-triplet constrained PES obtained with different gradient-corrected functionals have a noticeable effect on the lowest kinetic energy part of the resulting sticking curve.Comment: 17 pages including 11 figures; related publications can be found at http://www.fhi-berlin.mpg.de/th/th.htm

Big Bang Nucleosynthesis Constraints on Hadronically and Electromagnetically Decaying Relic Neutral Particles

Big Bang nucleosynthesis in the presence of decaying relic neutral particles is examined in detail. All non-thermal processes important for the determination of light-element abundance yields of 2H, 3H, 3He, 4He, 6Li, and 7Li are coupled to the thermonuclear fusion reactions to obtain comparatively accurate results. Predicted light-element yields are compared to observationally inferred limits on primordial light-element abundances to infer constraints on the abundances and properties of relic decaying particles with decay times in the interval 0.01 sec < tau < 10^(12) sec. Decaying particles are typically constrained at early times by 4He or 2H, at intermediate times by 6Li, and at large times by the 3He/2H ratio. Constraints are shown for a large number of hadronic branching ratios and decaying particle masses and may be applied to constrain the evolution of the early Universe.Comment: 24 pages (revtex), 11 figures, title changed, matches published versio

Constitutive modeling of indentation cracking in fused silica

Fused silica shows three distinct regimes during nanoindentation, that is, plastic deformation, inelastic densification, and cracking. Cohesive zone FEM is used to study these regimes for different indenter geometries. In a three-dimensional model, the median/radial cracking is considered by introducing cohesive element planes that are aligned along the indenter edges perpendicular to the indented surface. In addition to comparing indentation cracking data with experimental data, the role of densification on indentation crack growth is critically examined using a pressure independent von Mises and a pressure dependent Drucker-Prager Cap constitutive model. The results show that the Drucker-Prager Cap model delivers an accurate description of the elastic-plastic deformation conditions for all examined indenter geometries. Material densification leads to shorter crack lengths and thus the approach by Lawn, Evans and Marshall (LEM) [1] results in larger indentation-based fracture toughness values (Equation 1). Please click Additional Files below to see the full abstract

Electron-hole pairs during the adsorption dynamics of O2 on Pd(100) - Exciting or not?

During the exothermic adsorption of molecules at solid surfaces dissipation of the released energy occurs via the excitation of electronic and phononic degrees of freedom. For metallic substrates the role of the nonadiabatic electronic excitation channel has been controversially discussed, as the absence of a band gap could favour an easy coupling to a manifold of electronhole pairs of arbitrarily low energies. We analyse this situation for the highly exothermic showcase system of molecular oxygen dissociating at Pd(100), using time-dependent perturbation theory applied to first-principles electronic-structure calculations. For a range of different trajectories of impinging O2 molecules we compute largely varying electron-hole pair spectra, which underlines the necessity to consider the high-dimensionality of the surface dynamical process when assessing the total energy loss into this dissipation channel. Despite the high Pd density of states at the Fermi level, the concomitant non-adiabatic energy losses nevertheless never exceed about 5% of the available chemisorption energy. While this supports an electronically adiabatic description of the predominant heat dissipation into the phononic system, we critically discuss the non-adiabatic excitations in the context of the O2 spin transition during the dissociation process.Comment: 20 pages including 7 figures; related publications can be found at http://www.fhi-berlin.mpg.de/th/th.html [added two references, changed V_{fsa} to V_{6D}, modified a few formulations in interpretation of spin asymmetry of eh-spectra, added missing equals sign in Eg.(2.10)

TransCom N2O model inter-comparison - Part 2:Atmospheric inversion estimates of N2O emissions

This study examines N2O emission estimates from five different atmospheric inversion frameworks based on chemistry transport models (CTMs). The five frameworks differ in the choice of CTM, meteorological data, prior uncertainties and inversion method but use the same prior emissions and observation data set. The posterior modelled atmospheric N2O mole fractions are compared to observations to assess the performance of the inversions and to help diagnose problems in the modelled transport. Additionally, the mean emissions for 2006 to 2008 are compared in terms of the spatial distribution and seasonality. Overall, there is a good agreement among the inversions for the mean global total emission, which ranges from 16.1 to 18.7 TgN yr(-1) and is consistent with previous estimates. Ocean emissions represent between 31 and 38% of the global total compared to widely varying previous estimates of 24 to 38%. Emissions from the northern mid- to high latitudes are likely to be more important, with a consistent shift in emissions from the tropics and subtropics to the mid- to high latitudes in the Northern Hemisphere; the emission ratio for 0-30A degrees N to 30-90A degrees N ranges from 1.5 to 1.9 compared with 2.9 to 3.0 in previous estimates. The largest discrepancies across inversions are seen for the regions of South and East Asia and for tropical and South America owing to the poor observational constraint for these areas and to considerable differences in the modelled transport, especially inter-hemispheric exchange rates and tropical convective mixing. Estimates of the seasonal cycle in N2O emissions are also sensitive to errors in modelled stratosphere-to-troposphere transport in the tropics and southern extratropics. Overall, the results show a convergence in the global and regional emissions compared to previous independent studies