A genome-wide investigation of the worldwide invader Sargassum muticum shows high success albeit (almost) no genetic diversity

Twenty years of genetic studies of marine invaders have shown that successful invaders are often characterized by native and introduced populations displaying similar levels of genetic diversity. This pattern is presumably due to high propagule pressure and repeated introductions. The opposite pattern is reported in this study of the brown seaweed, Sargassum muticum, an emblematic species for circumglobal invasions. Albeit demonstrating polymorphism in the native range, microsatellites failed to detect any genetic variation over 1,269 individuals sampled from 46 locations over the Pacific-Atlantic introduction range. Single-nucleotide polymorphisms (SNPs) obtained from ddRAD sequencing revealed some genetic variation, but confirmed severe founder events in both the Pacific and Atlantic introduction ranges. Our study thus exemplifies the need for extreme caution in interpreting neutral genetic diversity as a proxy for invasive potential. Our results confirm a previously hypothesized transoceanic secondary introduction from NE Pacific to Europe. However, the SNP panel unexpectedly revealed two additional distinct genetic origins of introductions. Also, conversely to scenarios based on historical records, southern rather than northern NE Pacific populations could have seeded most of the European populations. Finally, the most recently introduced populations showed the lowest selfing rates, suggesting higher levels of recombination might be beneficial at the early stage of the introduction process (i.e., facilitating evolutionary novelties), whereas uniparental reproduction might be favored later in sustainably established populations (i.e., sustaining local adaptation).Agence Nationale de la Recherche - ANR-10-BTBR-04; European Regional Development Fund; Fundacao para a Ciencia e a Tecnologia - SFRH/BPD/107878/2015, UID/Multi/04326/2016, UID/Multi/04326/2019; Brittany Region;info:eu-repo/semantics/publishedVersio

The singular continuous diffraction measure of the Thue-Morse chain

The paradigm for singular continuous spectra in symbolic dynamics and in mathematical diffraction is provided by the Thue-Morse chain, in its realisation as a binary sequence with values in $\{\pm 1\}$. We revisit this example and derive a functional equation together with an explicit form of the corresponding singular continuous diffraction measure, which is related to the known representation as a Riesz product.Comment: 6 pages, 1 figure; revised and improved versio

Data-driven efficient score tests for deconvolution problems

We consider testing statistical hypotheses about densities of signals in deconvolution models. A new approach to this problem is proposed. We constructed score tests for the deconvolution with the known noise density and efficient score tests for the case of unknown density. The tests are incorporated with model selection rules to choose reasonable model dimensions automatically by the data. Consistency of the tests is proved

Inconsistency of the MLE for the joint distribution of interval censored survival times and continuous marks

This paper considers the nonparametric maximum likelihood estimator (MLE) for the joint distribution function of an interval censored survival time and a continuous mark variable. We provide a new explicit formula for the MLE in this problem. We use this formula and the mark specific cumulative hazard function of Huang and Louis (1998) to obtain the almost sure limit of the MLE. This result leads to necessary and sufficient conditions for consistency of the MLE which imply that the MLE is inconsistent in general. We show that the inconsistency can be repaired by discretizing the marks. Our theoretical results are supported by simulations.Comment: 27 pages, 4 figure

Quantum learning: optimal classification of qubit states

Pattern recognition is a central topic in Learning Theory with numerous applications such as voice and text recognition, image analysis, computer diagnosis. The statistical set-up in classification is the following: we are given an i.i.d. training set $(X_{1},Y_{1}),... (X_{n},Y_{n})$ where $X_{i}$ represents a feature and $Y_{i}\in \{0,1\}$ is a label attached to that feature. The underlying joint distribution of $(X,Y)$ is unknown, but we can learn about it from the training set and we aim at devising low error classifiers $f:X\to Y$ used to predict the label of new incoming features. Here we solve a quantum analogue of this problem, namely the classification of two arbitrary unknown qubit states. Given a number of `training' copies from each of the states, we would like to `learn' about them by performing a measurement on the training set. The outcome is then used to design mesurements for the classification of future systems with unknown labels. We find the asymptotically optimal classification strategy and show that typically, it performs strictly better than a plug-in strategy based on state estimation. The figure of merit is the excess risk which is the difference between the probability of error and the probability of error of the optimal measurement when the states are known, that is the Helstrom measurement. We show that the excess risk has rate $n^{-1}$ and compute the exact constant of the rate.Comment: 24 pages, 4 figure

Risk factors for behavior problems in cats presented to an Australian companion animal behavior clinic

Behavior problems in companion animals are common reasons for relinquishment or euthanasia. Insight into the risk factors for problem behaviors will facilitate the construction of strategies for solutions. We identified risk factors for behavior problems in domestic cats whose owners contacted a companion animal behavior clinic in Brisbane, Australia. Owners of 1,556 cats reported on their cats' behavior problem, breed, sex and age, and owner's postcodes and work routine were also recorded. Risk factors were determined from proportional morbidities for the behavior problem that each cat was reported as having. Breed effects were also assessed by comparing the numbers of cats in each breed group with the breeds of registered cats in a part of the catchment area. Behavior problems in domestic cats where the owners sought professional advice were mostly (71% of all cats) related to house soiling, usually urination, and aggression, especially to familiar people. Persian and similar breeds were at reduced risk of aggression to familiar cats but increased risk of house soiling, compared to other breed groups. Overall, Persian, Siamese, Burmese, and similar breeds had more behavior problems than companion cat breeds. Older cats showed increasing tolerance of familiar people but reduced tolerance of other cats. Males were more likely to present with excessive vocalization and house soiling with urine and less likely to present with aggression between familiar cats. We conclude that cat breed, age and sex, and social advantage of the area in which the cat lives are risk factors for specific behavior problems

Quantum Monte Carlo treatment of elastic exciton-exciton scattering

We calculate cross sections for low energy elastic exciton-exciton scattering within the effective mass approximation. Unlike previous theoretical approaches, we give a complete, non-perturbative treatment of the four-particle scattering problem. Diffusion Monte Carlo is used to calculate the essentially exact energies of scattering states, from which phase shifts are determined. For the case of equal-mass electrons and holes, which is equivalent to positronium-positronium scattering, we find a_s = 2.1 a_x for scattering of singlet-excitons and a_s= 1.5 a_x for triplet-excitons, where a_x is the excitonic radius. The spin dependence of the cross sections arises from the spatial exchange symmetry of the scattering wavefunctions. A significant triplet-triplet to singlet-singlet scattering process is found, which is similar to reported effects in recent experiments and theory for excitons in quantum wells. We also show that the scattering length can change sign and diverge for some values of the mass ratio m_h/m_e, an effect not seen in previous perturbative treatments.Comment: 6 pages, 6 figures. Revision has updated figures, improved paper structure, some minor correction

Tools to overcome potential barriers to chlamydia screening in general practice: Qualitative evaluation of the implementation of a complex intervention

Background: Chlamydia trachomatis remains a significant public health problem. We used a complex intervention, with general practice staff, consisting of practice based workshops, posters, computer prompts and testing feedback and feedback to increase routine chlamydia screening tests in under 25 year olds in South West England. We aimed to evaluate how intervention components were received by staff and to understand what determined their implementation into ongoing practice. Methods: We used face-to-face and telephone individual interviews with 29 general practice staff analysed thematically within a Normalisation Process Theory Framework which explores: 1. Coherence (if participants understand the purpose of the intervention); 2. Cognitive participation (engagement with and implementation of the intervention); 3. Collective action (work actually undertaken that drives the intervention forwards); 4. Reflexive monitoring (assessment of the impact of the intervention). Results: Our results showed coherence as all staff including receptionists understood the purpose of the training was to make them aware of the value of chlamydia screening tests and how to increase this in their general practice. The training was described by nearly all staff as being of high quality and responsible for creating a shared understanding between staff of how to undertake routine chlamydia screening. Cognitive participation in many general practice staff teams was demonstrated through their engagement by meeting after the training to discuss implementation, which confirmed the role of each staff member and the use of materials. However several participants still felt unable to discuss chlamydia in many consultations or described sexual health as low priority among colleagues. National targets were considered so high for some general practice staff that they didn’t engage with the screening intervention. Collective action work undertaken to drive the intervention included use of computer prompts which helped staff remember to make the offer, testing rate feedback and having a designated lead. Ensuring patients collected samples when still in the general practice was not attained in most general practices. Reflexive monitoring showed positive feedback from patients and other staff about the value of screening, and feedback about the general practices testing rates helped sustain activity. Conclusions: A complex intervention including interactive workshops, materials to help implementation and feedback can help chlamydia screening testing increase in general practices

Simpósio Nacional de Culturas Agro-industriais Potencialidades e perspectivas

Simpósio Nacional de Culturas Agro-industriais Potencialidades e perspectiva