1,557 research outputs found
The small heat shock protein 20 RSI2 interacts with and is required for stability and function of tomato resistance protein I-2
Race-specific disease resistance in plants depends on the presence of resistance (R) genes. Most R genes encode NB-ARC-LRR proteins that carry a C-terminal leucine-rich repeat (LRR). Of the few proteins found to interact with the LRR domain, most have proposed (co)chaperone activity. Here, we report the identification of RSI2 (Required for Stability of I-2) as a protein that interacts with the LRR domain of the tomato R protein I-2. RSI2 belongs to the family of small heat shock proteins (sHSPs or HSP20s). HSP20s are ATP-independent chaperones that form oligomeric complexes with client proteins to prevent unfolding and subsequent aggregation. Silencing of RSI2-related HSP20s in Nicotiana benthamiana compromised the hypersensitive response that is normally induced by auto-active variants of I-2 and Mi-1, a second tomato R protein. As many HSP20s have chaperone properties, the involvement of RSI2 and other R protein (co)chaperones in I-2 and Mi-1 protein stability was examined. RSI2 silencing compromised the accumulation of full-length I-2 in planta, but did not affect Mi-1 levels. Silencing of heat shock protein 90 (HSP90) and SGT1 led to an almost complete loss of full-length I-2 accumulation and a reduction in Mi-1 protein levels. In contrast to SGT1 and HSP90, RSI2 silencing led to accumulation of I-2 breakdown products. This difference suggests that RSI2 and HSP90/SGT1 chaperone the I-2 protein using different molecular mechanisms. We conclude that I-2 protein function requires RSI2, either through direct interaction with, and stabilization of I-2 protein or by affecting signalling components involved in initiation of the hypersensitive response
Cornetto: A Combinatorial Lexical Semantic Database for Dutch
One of the goals of the STEVIN programme is the realisation of a digital infrastructure that will enforce the position of the Dutch language in the modern information and communication technology.A semantic database makes it possible to go from words to concepts and consequently, to develop technologies that access and use knowledge rather than textual representations
Precision Studies of QCD in the Low Energy Domain of the EIC
The manuscript focuses on the high impact science of the EIC with objective
to identify a portion of the science program for QCD precision studies that
requires or greatly benefits from high luminosity and low center-of-mass
energies. The science topics include (1) Generalized Parton Distributions, 3D
imagining and mechanical properties of the nucleon (2) mass and spin of the
nucleon (3) Momentum dependence of the nucleon in semi-inclusive deep inelastic
scattering (4) Exotic meson spectroscopy (5) Science highlights of nuclei (6)
Precision studies of Lattice QCD in the EIC era (7) Science of far-forward
particle detection (8) Radiative effects and corrections (9) Artificial
Intelligence (10) EIC interaction regions for high impact science program with
discovery potential. This paper documents the scientific basis for supporting
such a program and helps to define the path toward the realization of the
second EIC interaction region.Comment: 103 pages,47 figure
Stage-Specific Inhibition of MHC Class I Presentation by the Epstein-Barr Virus BNLF2a Protein during Virus Lytic Cycle
gamma-herpesvirus Epstein-Barr virus (EBV) persists for life in infected individuals despite the presence of a strong immune response. During the lytic cycle of EBV many viral proteins are expressed, potentially allowing virally infected cells to be recognized and eliminated by CD8+ T cells. We have recently identified an immune evasion protein encoded by EBV, BNLF2a, which is expressed in early phase lytic replication and inhibits peptide- and ATP-binding functions of the transporter associated with antigen processing. Ectopic expression of BNLF2a causes decreased surface MHC class I expression and inhibits the presentation of indicator antigens to CD8+ T cells. Here we sought to examine the influence of BNLF2a when expressed naturally during EBV lytic replication. We generated a BNLF2a-deleted recombinant EBV (ΔBNLF2a) and compared the ability of ΔBNLF2a and wild-type EBV-transformed B cell lines to be recognized by CD8+ T cell clones specific for EBV-encoded immediate early, early and late lytic antigens. Epitopes derived from immediate early and early expressed proteins were better recognized when presented by ΔBNLF2a transformed cells compared to wild-type virus transformants. However, recognition of late antigens by CD8+ T cells remained equally poor when presented by both wild-type and ΔBNLF2a cell targets. Analysis of BNLF2a and target protein expression kinetics showed that although BNLF2a is expressed during early phase replication, it is expressed at a time when there is an upregulation of immediate early proteins and initiation of early protein synthesis. Interestingly, BNLF2a protein expression was found to be lost by late lytic cycle yet ΔBNLF2a-transformed cells in late stage replication downregulated surface MHC class I to a similar extent as wild-type EBV-transformed cells. These data show that BNLF2a-mediated expression is stage-specific, affecting presentation of immediate early and early proteins, and that other evasion mechanisms operate later in the lytic cycle
Isolation of Flow and Nonflow Correlations by Two- and Four-Particle Cumulant Measurements of Azimuthal Harmonics in 200 GeV Au+Au Collisions
A data-driven method was applied to measurements of Au+Au collisions at
200 GeV made with the STAR detector at RHIC to isolate
pseudorapidity distance -dependent and -independent
correlations by using two- and four-particle azimuthal cumulant measurements.
We identified a component of the correlation that is -independent,
which is likely dominated by anisotropic flow and flow fluctuations. It was
also found to be independent of within the measured range of
pseudorapidity . The relative flow fluctuation was found to be for particles of transverse momentum
less than GeV/. The -dependent part may be attributed to
nonflow correlations, and is found to be relative to the
flow of the measured second harmonic cumulant at
Measurements of and Production in + Collisions at = 200 GeV
We report measurements of charmed-hadron (, ) production cross
sections at mid-rapidity in + collisions at a center-of-mass energy of
200 GeV by the STAR experiment. Charmed hadrons were reconstructed via the
hadronic decays , and their charge conjugates,
covering the range of 0.62.0 GeV/ and 2.06.0 GeV/ for
and , respectively. From this analysis, the charm-pair production cross
section at mid-rapidity is = 170 45
(stat.) (sys.) b. The extracted charm-pair cross section is
compared to perturbative QCD calculations. The transverse momentum differential
cross section is found to be consistent with the upper bound of a Fixed-Order
Next-to-Leading Logarithm calculation.Comment: 15 pages, 16 figures. Revised version submitted to Phys. Rev.
Charged-to-neutral correlation at forward rapidity in Au+Au collisions at =200 GeV
Event-by-event fluctuations of the ratio of inclusive charged to photon
multiplicities at forward rapidity in Au+Au collision at =200
GeV have been studied. Dominant contribution to such fluctuations is expected
to come from correlated production of charged and neutral pions. We search for
evidences of dynamical fluctuations of different physical origins. Observables
constructed out of moments of multiplicities are used as measures of
fluctuations. Mixed events and model calculations are used as baselines.
Results are compared to the dynamical net-charge fluctuations measured in the
same acceptance. A non-zero statistically significant signal of dynamical
fluctuations is observed in excess to the model prediction when charged
particles and photons are measured in the same acceptance. We find that, unlike
dynamical net-charge fluctuation, charge-neutral fluctuation is not dominated
by correlation due to particle decay. Results are compared to the expectations
based on the generic production mechanism of pions due to isospin symmetry, for
which no significant (<1%) deviation is observed.Comment: 14 pages, 6 figure
Energy dependence of acceptance-corrected dielectron excess mass spectrum at mid-rapidity in Au+Au collisions at and 200 GeV
The acceptance-corrected dielectron excess mass spectra, where the known
hadronic sources have been subtracted from the inclusive dielectron mass
spectra, are reported for the first time at mid-rapidity in
minimum-bias Au+Au collisions at = 19.6 and 200 GeV. The excess
mass spectra are consistently described by a model calculation with a broadened
spectral function for GeV/. The integrated
dielectron excess yield at = 19.6 GeV for
GeV/, normalized to the charged particle multiplicity at mid-rapidity, has
a value similar to that in In+In collisions at = 17.3 GeV. For
= 200 GeV, the normalized excess yield in central collisions is
higher than that at = 17.3 GeV and increases from peripheral to
central collisions. These measurements indicate that the lifetime of the hot,
dense medium created in central Au+Au collisions at = 200 GeV
is longer than those in peripheral collisions and at lower energies.Comment: 9 pages, 6 figure
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