Antimicrobial resistance patterns and transferable traits in Enterobacteriaceae isolates from poultry in Tlemcen, Algeria

Background: Antibiotics are overused in poultry industry, and this has resulted in the emergence of multidrug resistant (MDR) bacteria. The current study is aimed at determining antimicrobial resistance (AMR) patterns of Enterobacteriaceae isolates from poultry in the west of Algeria.Methodology: Different chicken samples (kidney, bone and intestine) were collected and processed for culture using standard microbiological methods to isolate Enterobacteriaceae. Isolates were identified biochemically using API 20E, while isolated Escherichia coli was typed for O1, O2 and O78 antigens using slide agglutination with specific antisera. All identified isolates were tested against 26 antibiotic disks using the Kirby Bauer disk diffusion method according to the CLSI standards. The minimum inhibitory concentrations (MICs) of chloramphenicol, tetracycline, nalidixic acid, ofloxacin and ciprofloxacin were determined for selected isolates. Conjugative plasmid transfer, plasmid incompatibility and colicin tests were used to detect transferable resistance traits in 48 selected E. coli isolates.Results: One hundred and thirty-eight bacteria species were isolated, which included Escherichia coli (n=107), Salmonella spp (n=11), Klebsiella spp (n=8), Enterobacter spp (n=7), Pseudomonas spp (n=3) and Citrobacter spp (n=2). Serotyping identified 24 agglutinable E. coli isolates with O78:K80 (n=11), O1:K1 (n=9) and O2:K1 (n=4). Antibiotic susceptibility showed high frequency of E. coli resistance to nalidixic acid (89.7%), tetracycline (82.2%), streptomycin (82.2%), nitrofurantoin (68.2%), ampicillin (45.8%), ticarcillin (44.9%), piperacillin(42.1%), and chloramphenicol (15.9%). The percentage of multi-drug resistance isolates (resistance to more than 3 antibiotic classes) was 87.9%. The results of conjugative transfer in 48 E. coli isolates shows that the most important resistance traits transferred by plasmids are ASTeSuTmp (18.5%) and SuTmp (12.3%).Conclusion: This study confirmed the presence of multiple antibiotic resistant E. coli and other members of family Enterobacteriaceae in poultry in Algeria, and showed that these antibiotic resistance traits are easily disseminated by plasmids, with dire consequences on human health. Keywords : Poultry, Enterobacteriaceae, antimicrobial resistance, conjugation, plasmid.   French title:  Profils de résistance aux antimicrobiens et caractères transférables des isolats d'entérobactéries provenant de volailles à Tlemcen, Algérie   Contexte: Les antibiotiques sont surutilisés dans l'industrie de la volaille, ce qui a entraîné l'émergence de bactéries multirésistantes (MDR). L'étude actuelle vise à déterminer les profils de résistance aux antimicrobiens (RAM) des isolats d'Enterobacteriaceae provenant de volailles dans l'ouest de l'Algérie.  Méthodologie: Différents échantillons de poulet (rein, os et intestin) ont été prélevés et traités pour la culture en utilisant des méthodes microbiologiques standard pour isoler les Enterobacteriaceae. Les isolats ont été identifiés biochimiquement en utilisant l'API 20E, tandis que Escherichia coli isolé a été typé pour les antigènes O1, O2 et O78 en utilisant l'agglutination sur lame avec des antisérums spécifiques. Tous les isolats identifiés ont été testés contre 26 disques antibiotiques en utilisant la méthode de diffusion sur disque de Kirby Bauer selon les normes CLSI. Les concentrations minimales inhibitrices (CMI) du chloramphénicol, de la tétracycline,de l'acide nalidixique, de l'ofloxacine et de la ciprofloxacine ont été déterminées pour certains isolats. Des tests de transfert plasmidique conjugatif, d'incompatibilité plasmidique et de colicine ont été utilisés pour détecter des traits de résistance transférables dans 48 isolats sélectionnés d'E. coli.Résultats: Cent trente-huit espèces de bactéries ont été isolées, parmi lesquelles Escherichia coli (n=107), Salmonella spp (n=11), Klebsiella spp (n=8), Enterobacter spp (n=7), Pseudomonas spp (n=3) et Citrobacter spp (n=2). Le sérotypage a identifié 24 isolats d'E. coli agglutinables avec O78: K80 (n=11), O1: K1 (n=9) et O2: K1 (n=4). La sensibilité aux antibiotiques a montré une fréquence élevée de résistance d'E. coli à l'acide nalidixique (89,7%), à la tétracycline (82,2%), à la streptomycine (82,2%), à la nitrofurantoïne (68,2%), àl'ampicilline (45,8%), à la ticarcilline (44,9%), à la pipéracilline (42,1%) et le chloramphénicol (15,9%). Le pourcentage d'isolats de résistance multi-médicaments (résistance à plus de 3 classes d'antibiotiques) était de 87,9%. Les résultats du transfert conjugatif dans 48 isolats d'E. coli montrent que les traits de résistance les plus importants transférés par les plasmides sont ASTeSuTmp (18,5%) et SuTmp (12,3%).Conclusion: Cette étude a confirmé la présence de multiples E. coli résistants aux antibiotiques et d'autres membres de la famille des Enterobacteriaceae chez les volailles en Algérie et a montré que ces traits de résistance aux antibiotiques sont facilement disséminés par les plasmides, avec des conséquences désastreuses sur la santé humaine. Mots clés: volaille, entérobactéries, résistance aux antimicrobiens, conjugaison, plasmide

Evaluation of alternative preservation treatments (water heat treatment, ultrasounds, thermosonication and UV-C radiation) to improve safety and quality of whole tomato

Previously optimised postharvest treatments were compared to conventional chlorinated water treatment in terms of their effects on the overall quality of tomato (‘Zinac’) during storage at 10 °C. The treatments in question were water heat treatment (WHT = 40 °C, 30 min), ultrasounds (US = 45 kHz, 80 %, 30 min), thermosonication (TS =40 °C, 30 min, 45 kHz, 80 %) and ultraviolet irradiation (UV-C: 0.97 kJ m−2). The quality factors evaluated were colour, texture, sensorial analysis, mass loss, antioxidant capacity, total phenolic content, peroxidase and pectin methylesterase enzymatic activities, and microbial load reduction. The results demonstrate that all treatments tested preserve tomato quality to some extent during storage at 10 °C. WHT, TS and UV-C proved to be more efficient on minimising colour and texture changes with the additional advantage of microbial load reduction, leading to a shelf life extension when compared to control trials. However, at the end of storage, with exception of WHT samples, the antioxidant activity and phenolic content of treated samples was lower than for control samples. Moreover, sensorial results were well correlated with instrumental colour experimental data. This study presents alternative postharvest technologies that improve tomato (Zinac) quality during shelf life period and minimise the negative impact of conventional chlorinated water on human safety, health and environment.info:eu-repo/semantics/publishedVersio

Towards a national trauma registry for the United Arab Emirates

<p>Abstract</p> <p>Background</p> <p>Trauma is a major health problem in the United Arab Emirates (UAE) as well as worldwide. Trauma registries provide large longitudinal databases for analysis and policy improvement. We aim in this paper to report on the development and evolution of a national trauma registry using a staged approach by developing a single-center registry, a two-center registry, and then a multi-center registry. The three registries were established by developing suitable data collection forms, databases, and interfaces to these databases. The first two registries collected data for a finite period of time and the third is underway. The steps taken to establish these registries depend on whether the registry is intended as a single-center or multi-center registry.</p> <p>Findings</p> <p>Several issues arose and were resolved during the development of these registries such as the relational design of the database, whether to use a standalone database management system or a web-based system, and the usability and security of the system. The inclusion of preventive medicine data elements is important in a trauma registry and the focus on road traffic collision data elements is essential in a country such as the UAE. The first two registries provided valuable data which has been analyzed and published.</p> <p>Conclusions</p> <p>The main factors leading to the successful establishment of a multi-center trauma registry are the development of a concise data entry form, development of a user-friendly secure web-based database system, the availability of a computer and Internet connection in each data collection center, funded data entry personnel well trained in extracting medical data from the medical record and entering it into the computer, and experienced personnel in trauma injuries and data analysis to continuously maintain and analyze the registry.</p

Classification of landforms in Southern Portugal (Ria Formosa Basin)

A Geographic Information Systems-based tool is used for macro-landform classification following the Hammond procedure, based upon a Digital Terrain Model (DTM) created from ordinary Kriging. Gentle slopes, surface curvature, highlands and lowlands areas are derived from the DTM. Combining this information allows the classification of terrain units (landforms). The procedure is applied to the Ria Formosa basin (Southern Portugal), with five different terrain types classified (plains, tablelands, plains with hills, open hills and hills)

Metabolic constituents of grapevine and grape-derived products

The numerous uses of the grapevine fruit, especially for wine and beverages, have made it one of the most important plants worldwide. The phytochemistry of grapevine is rich in a wide range of compounds. Many of them are renowned for their numerous medicinal uses. The production of grapevine metabolites is highly conditioned by many factors like environment or pathogen attack. Some grapevine phytoalexins have gained a great deal of attention due to their antimicrobial activities, being also involved in the induction of resistance in grapevine against those pathogens. Meanwhile grapevine biotechnology is still evolving, thanks to the technological advance of modern science, and biotechnologists are making huge efforts to produce grapevine cultivars of desired characteristics. In this paper, important metabolites from grapevine and grape derived products like wine will be reviewed with their health promoting effects and their role against certain stress factors in grapevine physiology

Imaging of subsurface lineaments in the southwestern part of the Thrace Basin from gravity data

Linear anomalies, as an indicator of the structural features of some geological bodies, are very important for the interpretation of gravity and magnetic data. In this study, an image processing technique known as the Hough transform (HT) algorithm is described for determining invisible boundaries and extensions in gravity anomaly maps. The Hough function implements the Hough transform used to extract straight lines or circles within two-dimensional potential field images. It is defined as image and Hough space. In the Hough domain, this function transforms each nonzero point in the parameter domain to a sinusoid. In the image space, each point in the Hough space is transformed to a straight line or circle. Lineaments are depicted from these straight lines which are transformed in the image domain. An application of the Hough transform to the Bouguer anomaly map of the southwestern part of the Thrace Basin, NW Turkey, shows the effectiveness of the proposed approach. Based on geological data and gravity data, the structural features in the southwestern part of the Thrace Basin are investigated by applying the proposed approach and the Blakely and Simpson method. Lineaments identified by these approaches are generally in good accordance with previously-mapped surface faults

Prospect and potential of Burkholderia sp. against Phytophthora capsici Leonian: a causative agent for foot rot disease of black pepper

Foot rot disease is a very destructive disease in black pepper in Malaysia. It is caused by Phytophthora capsici Leonian, which is a soilborne pathogenic protist (phylum, Oomycota) that infects aerial and subterranean structures of many host plants. This pathogen is a polycyclic, such that multiple cycles of infection and inoculum production occur in a single growing season. It is more prevalent in the tropics because of the favourable environmental conditions. The utilization of plant growth-promoting rhizobacteria (PGPR) as a biological control agent has been successfully implemented in controlling many plant pathogens. Many studies on the exploration of beneficial organisms have been carried out such as Pseudomonas fluorescens, which is one of the best examples used for the control of Fusarium wilt in tomato. Similarly, P. fluorescens is found to be an effective biocontrol agent against the foot rot disease in black pepper. Nowadays there is tremendous novel increase in the species of Burkholderia with either mutualistic or antagonistic interactions in the environment. Burkholderia sp. is an indigenous PGPR capable of producing a large number of commercially important hydrolytic enzymes and bioactive substances that promote plant growth and health; are eco-friendly, biodegradable and specific in their actions; and have a broad spectrum of antimicrobial activity in keeping down the population of phytopathogens, thus playing a great role in promoting sustainable agriculture today. Hence, in this book chapter, the potential applications of Burkholderia sp. to control foot rot disease of black pepper in Malaysia, their control mechanisms, plant growth promotion, commercial potentials and the future prospects as indigenous PGPR were discussed in relation to sustainable agriculture