A ground-based NUV secondary eclipse observation of KELT-9b

KELT-9b is a recently discovered exoplanet with a 1.49 d orbit around a B9.5/A0-type star. The unparalleled levels of UV irradiation it receives from its host star put KELT-9b in its own unique class of ultra-hot Jupiters, with an equilibrium temperature > 4000 K. The high quantities of dissociated hydrogen and atomic metals present in the dayside atmosphere of KELT-9b bear more resemblance to a K-type star than a gas giant. We present a single observation of KELT-9b during its secondary eclipse, taken with the Wide Field Camera on the Isaac Newton Telescope (INT). This observation was taken in the U-band, a window particularly sensitive to Rayleigh scattering. We do not detect a secondary eclipse signal, but our 3$\sigma$ upper limit of 181 ppm on the depth allows us to constrain the dayside temperature of KELT-9b at pressures of ~30 mbar to 4995 K (3$\sigma$). Although we can place an observational constraint of $A_g<$ 0.14, our models suggest that the actual value is considerably lower than this due to H$^-$ opacity. This places KELT-9b squarely in the albedo regime populated by its cooler cousins, almost all of which reflect very small components of the light incident on their daysides. This work demonstrates the ability of ground-based 2m-class telescopes like the INT to perform secondary eclipse studies in the NUV, which have previously only been conducted from space-based facilities.Comment: Accepted in ApJL. 7 pages, 3 figure

How an improved knowledge and information system can support productivity and livelihoods in the smallholder dairy sector.

The Smallholder Dairy Project (SDP) carried out a short study into the knowledge and information systems of Kenya’s smallholder dairy sector. The rationale was that by understanding and catalyzing reform of this system, SDP would not only enhance the impact of its own research outputs, but would lead to a long-lasting improvement in the impacts of research and other information relevant to the sub-sector. The RAAKS (Rapid Appraisal of Agricultural Knowledge Systems) approach was used, involving a range of participatory approaches through workshops and semi-structured interviews, at national and local level. Key findings included poor co-ordination between the many public, private and NGO actors in the knowledge system, and problems in the regulation of privately provided information that limited farmers’ ability to access information to improve productivity. Options to improve the system and the linkages were explored through key informant workshops

The bacteriophage carrier state of Campylobacter jejuni features changes in host non-coding RNAs and the acquisition of new host-derived CRISPR spacer sequences

Incorporation of self-derived CRISPR DNA protospacers in Campylobacter jejuni PT14 occurs in the presence of bacteriophages encoding a CRISPR-like Cas4 protein. This phenomenon was evident in carrier state infections where both bacteriophages and host are maintained for seemingly indefinite periods as stable populations following serial passage. Carrier state cultures of C. jejuni PT14 have greater aerotolerance in nutrient limited conditions, and may have arisen as an evolutionary response to selective pressures imposed during periods in the extra-intestinal environment. A consequence of this is that bacteriophage and host remain associated and able to survive transition periods where the chances of replicative success are greatly diminished. The majority of the bacteriophage population do not commit to lytic infection, and conversely the bacterial population tolerates low-level bacteriophage replication. We recently examined the effects of Campylobacter bacteriophage/C. jejuni PT14 CRISPR spacer acquisition using deep sequencing strategies of DNA and RNA-Seq to analyze carrier state cultures. This approach identified de novo spacer acquisition in C. jejuni PT14 associated with Class III Campylobacter phages CP8/CP30A but spacer acquisition was oriented toward the capture of host DNA. In the absence of bacteriophage predation the CRISPR spacers in uninfected C. jejuni PT14 cultures remain unchanged. A distinct preference was observed for incorporation of self-derived protospacers into the third spacer position of the C. jejuni PT14 CRISPR array, with the first and second spacers remaining fixed. RNA-Seq also revealed the variation in the synthesis of non-coding RNAs with the potential to bind bacteriophage genes and/or transcript sequences

Extreme asteroids in the Pan-STARRS 1 Survey

Using the first 18 months of the Pan-STARRS 1 survey we have identified 33 candidate high-amplitude objects for follow-up observations and carried out observations of 22 asteroids. 4 of the observed objects were found to have observed amplitude $A_{obs}\geq 1.0$ mag. We find that these high amplitude objects are most simply explained by single rubble pile objects with some density-dependent internal strength, allowing them to resist mass shedding even at their highly elongated shapes. 3 further objects although below the cut-off for 'high-amplitude' had a combination of elongation and rotation period which also may require internal cohesive strength, depending on the density of the body. We find that none of the 'high-amplitude asteroids' identified here require any unusual cohesive strengths to resist rotational fission. 3 asteroids were sufficiently observed to allow for shape and spin pole models to be determined through light curve inversion. 45864 was determined to have retrograde rotation with spin pole axes $\lambda=218\pm 10^{\circ}, \beta=-82\pm 5^{\circ}$ and asteroid 206167 was found to have best fit spin pole axes $\lambda= 57 \pm 5^{\circ}$, $\beta=-67 \pm 5^{\circ}$. An additional object not initially measured with $A_{obs}>1.0$ mag, 49257, was determined to have a shape model which does suggest a high-amplitude object. Its spin pole axes were best fit for values $\lambda=112\pm 6^{\circ}, \beta=6\pm 5^{\circ}$. In the course of this project to date no large super-fast rotators ($P_{rot} < 2.2$ h) have been identified.Comment: 31 pages; accepted by A

Detection of Intracellular Bacterial Communities in Human Urinary Tract Infection

Analyzing urine specimens from women with bladder infections, Scott Hultgren and colleagues find evidence for intracellular bacterial communities, which have been associated with recurrent urinary tract infections in mice

SJS/TENN: A Mnemonic for Early Clinical Diagnosis of Stevens-Johnson Syndrome and Toxic Epidermal Necrolysis

Steven Johnson Syndrome (SJS) and toxic epidermal necrolysis (TEN) are dermatologic emergencies that are more likely to be encountered by primary care providers rather than dermatologists. Thus, it is essential for all clinicians to be familiar with common signs associated with SJS/TEN, so as not to miss or delay the diagnosis. We designed the simple mnemonic “SJS/TENN” which describes the most frequently seen clinical characteristics in these conditions to aid in the initial diagnosis

Spectroscopic Transit Search: a self-calibrating method for detecting planets around bright stars

We search for transiting exoplanets around the star $\beta$ Pictoris using high resolution spectroscopy and Doppler imaging that removes the need for standard star observations. These data were obtained on the VLT with UVES during the course of an observing campaign throughout 2017 that monitored the Hill sphere transit of the exoplanet $\beta$ Pictoris b. We utilize line profile tomography as a method for the discovery of transiting exoplanets. By measuring the exoplanet distortion of the stellar line profile, we remove the need for reference star measurements. We demonstrate the method with white noise simulations, and then look at the case of $\beta$ Pictoris, which is a $\delta$ Scuti pulsator. We describe a method to remove the stellar pulsations and perform a search for any transiting exoplanets in the resultant data set. We inject fake planet transits with varying orbital periods and planet radii into the spectra and determine the recovery fraction. In the photon noise limited case we can recover planets down to a Neptune radius with an $\sim$80% success rate, using an 8 m telescope with a $R\sim 100,000$ spectrograph and 20 minutes of observations per night. The pulsations of $\beta$ Pictoris limit our sensitivity to Jupiter-sized planets, but a pulsation removal algorithm improves this limit to Saturn-sized planets. We present two planet candidates, but argue that their signals are most likely caused by other phenomena. We have demonstrated a method for searching for transiting exoplanets that (i) does not require ancillary calibration observations, (ii) can work on any star whose rotational broadening can be resolved with a high spectral dispersion spectrograph and (iii) provides the lowest limits so far on the radii of transiting Jupiter-sized exoplanets around $\beta$ Pictoris with orbital periods from 15 days to 200 days with >50% coverage.Comment: Accepted for publication in A&A, 8 pages, 8 figures. The Github repository can be found at https://github.com/lennartvansluijs/Spectroscopic-Transit-Searc

The complete plasmid sequences of Salmonella enterica serovar Typhimurium U288.

Salmonella enterica Serovar Typhimurium U288 is an emerging pathogen of pigs. The strain contains three plasmids of diverse origin that encode traits that are of concern for food security and safety, these include antibiotic resistant determinants, an array of functions that can modify cell physiology and permit genetic mobility. At 148,711 bp, pSTU288-1 appears to be a hybrid plasmid containing a conglomerate of genes found in pSLT of S. Typhimurium LT2, coupled with a mosaic of horizontally-acquired elements. Class I integron containing gene cassettes conferring resistance against clinically important antibiotics and compounds are present in pSTU288-1. A curious feature of the plasmid involves the deletion of two genes encoded in the Salmonella plasmid virulence operon (spvR and spvA) following the insertion of a tnpA IS26-like element coupled to a blaTEM gene. The spv operon is considered to be a major plasmid-encoded Salmonella virulence factor that is essential for the intracellular lifecycle. The loss of the positive regulator SpvR may impact on the pathogenesis of S. Typhimurium U288. A second 11,067 bp plasmid designated pSTU288-2 contains further antibiotic resistance determinants, as well as replication and mobilization genes. Finally, a small 4675 bp plasmid pSTU288-3 was identified containing mobilization genes and a pleD-like G-G-D/E-E-F conserved domain protein that modulate intracellular levels of cyclic di-GMP, and are associated with motile to sessile transitions in growth