Comparison of Landing Variables between Countermovement Jump Landings and Drop Vertical Jump Landings from Equal Heights

The countermovement jump (CMJ) and drop vertical jump (DVJ) are often used as a measurement of physical ability or performance potential, while analysis of landing can provide crucial information regarding injury risk. In theory, similar landing strategies should be employed when CMJ jump height and DVJ drop height are controlled, yet we know of no studies have investigated this possibility. PURPOSE: to examine and compare landing characteristics between CMJ and DVJ when flight height is controlled. METHODS: Forty (20 males; 20 females; 22.5 ± 4.3 years, 1.7 ± 0.1 m, 73.2 ± 13.3 kg) recreationally active individuals performed three CMJ and three DVJ trials, each from the same height which was controlled using a Vertec. Vertical ground reaction force (VGRF) data was obtained from a portable force platform. Landing momentum, landing time, and peak vGRF were obtained from the processed vGRF data using a custom analysis program. Variables were compared between jumps (CMJ, DVJ) using paired samples t-tests (α = 0.05). Cohen’s d is used to supplement statistical outcomes by demonstrating the magnitude of mean differences. RESULTS: Landing momentum was 4.8% greater during DVJ than during CMJ and the difference was small (DVJ = -193.6 ± 52.2, CMJ = -184.4 ± 52.5; P=0.049, d = 0.4), indicating slightly greater landing heights during DVJ. Landing time during DVJ was 52% shorter than the CMJ landing time and the difference was very large (DVJ = 0.4 ± 0.2, CMJ = 0.7 ± 0.2; P\u3c0.001, d =1.7), while DVJ peak impact force was 14.7% less than CMJ peak impact force and the difference was moderate (DVJ = 3.5 ± 1.0; CMJ = 4.1 ± 0.7; P=0.002, d = 0.6). CONCLUSION: While the significant difference in landing momentum was not random, the magnitude of mean difference was small, indicating relatively similar landing momentum between jumps. Thus, the present study shows that, even when controlling jump height between the CMJ and DVJ, the tasks do not have similar landing demands, defined by momentum, time, nor peak impact force. Due to the differences observed, the CMJ and DVJ should not be used interchangeably or as a comparison between one another when examining these specific landing variables. Finally, the DVJ might expose performers to lesser overuse injury risks related to impact forces

Evaluation of Microbial Floc and Microalgae Spirulina Platensis Combination for Juvenile Cobia Rachycentron Canadum Diets on Growth and Physiological Responses After Immersion in Freshwater

In marine aquaculture, immersing marine fish species in fresh water can remove ectoparasite that adhere to all over the fish body. This study aimed to evaluate the impacts of combining microbial floc and microalgae Spirulina platensis in juvenile cobia diet on growth performance and stress responses after immersion in aerated fresh water for 15 minutes. The fishes were reared in concrete tanks for 40 days before collecting data on their growth performance. The stress response was determined by mea-suring both glucose and cortisol levels before (0 h) and after (1, 2, 4, 6, 24 hours) immersion. The fish-es fed on the 15% of combining microbial flock and microalgae Spirulina platensis diet showed the highest growth rate with the lowest feed conversion ratio compared to other treatments. The cortisol level of juvenile cobia in both the 15% and 30% combination of microbial floc and microalgae Spiru-lina platensis treatments did not increase during the first hour following the immersion compared to the control treatment. The glucose level also increased after one hour immersion in freshwater of all treatments. This indicated that feeding juvenile cobia on microbial flocs and microalgae diets had a retarding effect on the physiological responses (cortisol and glucose) after immersion in fresh water

Functional megalin is expressed in renal cysts in a mouse model of adult polycystic kidney disease

BACKGROUND: Autosomal dominant polycystic kidney disease (ADPKD) is characterized by the progressive growth of cysts and a decline of renal function. The clinical feasibility of the number of potential disease-modifying drugs is limited by systemic adverse effects. We hypothesize that megalin, a multiligand endocytic receptor expressed in the proximal tubule, may be used to facilitate drug uptake into cysts, thereby allowing for greater efficacy and fewer side effects. METHODS: The cyst expression of various tubular markers, including megalin and aquaporin 2 (AQP2), was analysed by immunohistochemistry (IHC) of kidney sections from the ADPKD mouse model (PKD1(RC/RC)) at different post-natal ages. The endocytic function of megalin in cysts was examined by IHC of kidney tissue from mice injected with the megalin ligand aprotinin. RESULTS: Cyst lining epithelial cells expressing megalin were observed at all ages; however, the proportion decreased with age. Concomitantly, an increasing proportion of cysts revealed expression of AQP2, partial expression of megalin and/or AQP2 or no expression of the examined markers. Endocytic uptake of aprotinin was evident in megalin-positive cysts, but only in those that remained connected to the renal tubular system. CONCLUSIONS: Megalin-expressing cysts were observed at all ages, but the proportion decreased with age, possibly due to a switch in tubular origin, a merging of cysts of different tubular origin and/or a change in the expression pattern of cyst lining cells. Megalin expressed in cysts was functional, suggesting that megalin-mediated endocytosis is a potential mechanism for drug targeting in ADPKD if initiated early in the disease

FPGA-accelerated machine learning inference as a service for particle physics computing

New heterogeneous computing paradigms on dedicated hardware with increased parallelization, such as Field Programmable Gate Arrays (FPGAs), offer exciting solutions with large potential gains. The growing applications of machine learning algorithms in particle physics for simulation, reconstruction, and analysis are naturally deployed on such platforms. We demonstrate that the acceleration of machine learning inference as a web service represents a heterogeneous computing solution for particle physics experiments that potentially requires minimal modification to the current computing model. As examples, we retrain the ResNet-50 convolutional neural network to demonstrate state-of-the-art performance for top quark jet tagging at the LHC and apply a ResNet-50 model with transfer learning for neutrino event classification. Using Project Brainwave by Microsoft to accelerate the ResNet-50 image classification model, we achieve average inference times of 60 (10) milliseconds with our experimental physics software framework using Brainwave as a cloud (edge or on-premises) service, representing an improvement by a factor of approximately 30 (175) in model inference latency over traditional CPU inference in current experimental hardware. A single FPGA service accessed by many CPUs achieves a throughput of 600--700 inferences per second using an image batch of one, comparable to large batch-size GPU throughput and significantly better than small batch-size GPU throughput. Deployed as an edge or cloud service for the particle physics computing model, coprocessor accelerators can have a higher duty cycle and are potentially much more cost-effective.Comment: 16 pages, 14 figures, 2 table

EVALUATION OF MICROBIAL FLOC AND MICROALGAE Spirulina platensis COMBINATION FOR JUVENILE COBIA Rachycentron canadum DIETS ON GROWTH AND PHYSIOLOGICAL RESPONSES AFTER IMMERSION IN FRESHWATER

In marine aquaculture, immersing marine fish species in fresh water can remove ectoparasite that adhere to all over the fish body. This study aimed to evaluate the impacts of combining microbial floc and microalgae Spirulina platensis in juvenile cobia diet on growth performance and stress responses after immersion in aerated fresh water for 15 minutes. The fishes were reared in concrete tanks for 40 days before collecting data on their growth performance. The stress response was determined by mea-suring both glucose and cortisol levels before (0 h) and after (1, 2, 4, 6, 24 hours) immersion. The fish-es fed on the 15% of combining microbial flock and microalgae Spirulina platensis diet showed the highest growth rate with the lowest feed conversion ratio compared to other treatments. The cortisol level of juvenile cobia in both the 15% and 30% combination of microbial floc and microalgae Spiru-lina platensis treatments did not increase during the first hour following the immersion compared to the control treatment. The glucose level also increased after one hour immersion in freshwater of all treatments. This indicated that feeding juvenile cobia on microbial flocs and microalgae diets had a retarding effect on the physiological responses (cortisol and glucose) after immersion in fresh water.Keywords: microbial, microalga, Spirulina, glucose, cortisol, stress, cobi

Mapping clustered mutations in cancer reveals APOBEC3 mutagenesis of ecDNA

Clustered somatic mutations are common in cancer genomes and previous analyses reveal several types of clustered single-base substitutions, which include doublet- and multi-base substitutions1–5, diffuse hypermutation termed omikli6, and longer strand-coordinated events termed kataegis3,7–9. Here we provide a comprehensive characterization of clustered substitutions and clustered small insertions and deletions (indels) across 2,583 whole-genome-sequenced cancers from 30 types of cancer10. Clustered mutations were highly enriched in driver genes and associated with differential gene expression and changes in overall survival. Several distinct mutational processes gave rise to clustered indels, including signatures that were enriched in tobacco smokers and homologous-recombination-deficient cancers. Doublet-base substitutions were caused by at least 12 mutational processes, whereas most multi-base substitutions were generated by either tobacco smoking or exposure to ultraviolet light. Omikli events, which have previously been attributed to APOBEC3 activity6, accounted for a large proportion of clustered substitutions; however, only 16.2% of omikli matched APOBEC3 patterns. Kataegis was generated by multiple mutational processes, and 76.1% of all kataegic events exhibited mutational patterns that are associated with the activation-induced deaminase (AID) and APOBEC3 family of deaminases. Co-occurrence of APOBEC3 kataegis and extrachromosomal DNA (ecDNA), termed kyklonas (Greek for cyclone), was found in 31% of samples with ecDNA. Multiple distinct kyklonic events were observed on most mutated ecDNA. ecDNA containing known cancer genes exhibited both positive selection and kyklonic hypermutation. Our results reveal the diversity of clustered mutational processes in human cancer and the role of APOBEC3 in recurrently mutating and fuelling the evolution of ecDNA

An allelic series of spontaneous Rorb mutant mice exhibit a gait phenotype, changes in retina morphology and behavior, and gene expression signatures associated with the unfolded protein response.

The Retinoid-related orphan receptor beta (RORβ) gene encodes a developmental transcription factor and has 2 predominant isoforms created through alternative first exon usage; one specific to the retina and another present more broadly in the central nervous system, particularly regions involved in sensory processing. RORβ belongs to the nuclear receptor family and plays important roles in cell fate specification in the retina and cortical layer formation. In mice, loss of RORβ causes disorganized retina layers, postnatal degeneration, and production of immature cone photoreceptors. Hyperflexion or high-stepping of rear limbs caused by reduced presynaptic inhibition by Rorb-expressing inhibitory interneurons of the spinal cord is evident in RORβ-deficient mice. RORβ variants in patients are associated with susceptibility to various neurodevelopmental conditions, primarily generalized epilepsies, but including intellectual disability, bipolar, and autism spectrum disorders. The mechanisms by which RORβ variants confer susceptibility to these neurodevelopmental disorders are unknown but may involve aberrant neural circuit formation and hyperexcitability during development. Here we report an allelic series in 5 strains of spontaneous Rorb mutant mice with a high-stepping gait phenotype. We show retinal abnormalities in a subset of these mutants and demonstrate significant differences in various behavioral phenotypes related to cognition. Gene expression analyses in all 5 mutants reveal a shared over-representation of the unfolded protein response and pathways related to endoplasmic reticulum stress, suggesting a possible mechanism of susceptibility relevant to patients

Visualizing Microservice Architecture in the Dynamic Perspective : A Systematic Mapping Study

As microservices become more popular, more drawbacks become apparent to developers. One issue that many teams face today is the failure to visualize the entire system architecture holistically. Without a full view of the system, the architecture can become convoluted as teams add and subtract from their system without reconciling their changes. One established practice to determine a view on the entire system involves dynamic analysis of microservice interaction and dependencies. In this mapping study, we investigate dynamic analysis as a way to visualize system architecture. Capturing the architectural view with dynamic analysis has the ability to build the system and then show its behavior at run-time. We identify dynamic analysis techniques, the corresponding tools, and the models that these practices can generate. The findings of this study are relevant to developers of decentralized systems looking for a way to visualize their system architecture in a dynamic perspective.publishedVersionPeer reviewe