Muon Acceleration in Cosmic-ray Sources

Many models of ultra-high energy cosmic-ray production involve acceleration in linear accelerators located in Gamma-Ray Bursts magnetars, or other sources. These source models require very high accelerating gradients, $10^{13}$ keV/cm, with the minimum gradient set by the length of the source. At gradients above 1.6 keV/cm, muons produced by hadronic interactions undergo significant acceleration before they decay. This acceleration hardens the neutrino energy spectrum and greatly increases the high-energy neutrino flux. We rule out many models of linear acceleration, setting strong constraints on plasma wakefield accelerators and on models for sources like Gamma Ray Bursts and magnetars.Comment: 5 pgs. submitted for publicatio

Attosecond probing of instantaneous AC Stark shifts in helium atoms

Based on numerical solutions of the time-dependent Schr\"odinger equation for either one or two active electrons, we propose a method for observing instantaneous level shifts in an oscillating strong infrared (IR) field in time, using a single tunable attosecond pulse to probe excited states of the perturbed atom. The ionization probability in the combined fields depends on both, the frequency of the attosecond pulse and the time delay between both pulses, since the IR field shifts excited energy levels into and out of resonance with the attosecond probe pulse. We show that this method (i) allows the detection of instantaneous atomic energy gaps with sub-laser-cycle time resolution and (ii) can be applied as an ultrafast gate for more complex processes such as non-sequential double-ionization

Caspase-8 controls the gut response to microbial challenges by Tnf-alpha-dependent and independent pathways

Objectives: Intestinal epithelial cells (IEC) express toll-like receptors (TLR) that facilitate microbial recognition. Stimulation of TLR ligands induces a transient increase in epithelial cell shedding, a mechanism that serves the antibacterial and antiviral host defence of the epithelium and promotes elimination of intracellular pathogens. Although activation of the extrinsic apoptosis pathway has been described during inflammatory shedding, its functional involvement is currently unclear. Design: We investigated the functional involvement of caspase-8 signalling in microbial-induced intestinal cell shedding by injecting Lipopolysaccharide (LPS) to mimic bacterial pathogens and poly(I:C) as a probe for RNA viruses in vivo. Results: TLR stimulation of IEC was associated with a rapid activation of caspase-8 and increased epithelial cell shedding. In mice with an epithelial cell-specific deletion of caspase-8 TLR stimulation caused Rip3-dependent epithelial necroptosis instead of apoptosis. Mortality and tissue damage were more severe in mice in which IECs died by necroptosis than apoptosis. Inhibition of receptor-interacting protein (Rip) kinases rescued the epithelium from TLR-induced gut damage. TLR3-induced necroptosis was directly mediated via TRIF-dependent pathways, independent of Tnf-α and type III interferons, whereas TLR4-induced tissue damage was critically dependent on Tnf-α. Conclusions: Together, our data demonstrate an essential role for caspase-8 in maintaining the gut barrier in response to mucosal pathogens by permitting inflammatory shedding and preventing necroptosis of infected cells. These data suggest that therapeutic strategies targeting the cell death machinery represent a promising new option for the treatment of inflammatory and infective enteropathies

Bulk compositions of the Chang’E-5 lunar soil: Insights into chemical homogeneity, exotic addition, and origin of landing site basalts

Lunar soil is a fine mixture of local rocks and exotic components. The bulk-rock chemical composition of the newly returned Chang’E-5 (CE-5) lunar soil was studied to understand its chemical homogeneity, exotic additions, and origin of landing site basalts. Concentrations of 48 major and trace elements, including many low-concentration volatile and siderophile elements, of two batches of the scooped CE-5 soil samples were simultaneously obtained by inductively coupled plasma mass spectrometry (ICP-MS) with minimal sample consumption. Their major and trace elemental compositions (except for Ni) are uniform at milligram levels (2–4 mg), matching measured compositions of basaltic glasses and estimates based on mineral modal abundances of basaltic fragments. This result indicates that the exotic highland and KREEP (K, rare earth elements, and P-rich) materials are very low (<5%) and the bulk chemical composition (except for Ni) of the CE-5 soil can be used to represent the underlying mare basalt. The elevated Ni concentrations reflect the addition of about 1 wt% meteoritic materials, which would not influence the other bulk composition except for some highly siderophile trace elements such as Ir. The CE-5 soil, which is overall the same as the underlying basalt in composition, displays low Mg# (34), high FeO (22.7 wt%), intermediate TiO2 (5.12 wt%), and high Th (5.14 µg/g) concentrations. The composition is distinct from basalts and soils returned by the Apollo and Luna missions, however, the depletion of volatile or siderophile elements such as K, Rb, Mo, and W in their mantle sources is comparable. The incompatible lithophile trace element concentrations (e.g., Ba, Rb, Th, U, Nb, Ta, Zr, Hf, and REE) of the CE-5 basalts are moderately high and their pattern mimics high-K KREEP. The pattern of these trace elements with K, Th, U, Nb, and Ta anomalies of the CE-5 basalts cannot be explained by the partial melting and crystallization of olivine, pyroxene, and plagioclase. Thus, the mantle source of the CE-5 landing site mare basalt could have contained KREEP components, likely as trapped interstitial melts. To reconcile these observations with the initial unradiogenic Sr and radiogenic Nd isotopic compositions of the CE-5 basalts, clinopyroxene characterized by low Rb/Sr and high Sm/Nd ratios could be one of the main minerals in the KREEP-bearing mantle source. Consequently, we propose that the CE-5 landing site mare basalts very likely originated from partial melting of a shallow and clinopyroxene-rich (relative to olivine and orthopyroxene) upper mantle cumulate with a small fraction (about 1–1.5 %) of KREEP-like materials

Mucoid morphotype variation of Burkholderia multivorans during chronic cystic fibrosis lung infection is correlated with changes in metabolism, motility, biofilm formation and virulence

Burkholderia cepacia complex (Bcc) bacteria are opportunistic pathogens infecting hosts such as cystic fibrosis (CF) patients. Long-term Bcc infection of CF patients' airways has been associated with emergence of phenotypic variation. Here we studied two Burkholderia multivorans clonal isolates displaying different morphotypes from a chronically infected CF patient to evaluate trait development during lung infection. Expression profiling of mucoid D2095 and non-mucoid D2214 isolates revealed decreased expression of genes encoding products related to virulence-associated traits and metabolism in D2214. Furthermore, D2214 showed no exopolysaccharide production, lower motility and chemotaxis, and more biofilm formation, particularly under microaerophilic conditions, than the clonal mucoid isolate D2095. When Galleria mellonella was used as acute infection model, D2214 at a cell number of approximately 7×10(6) c.f.u. caused a higher survival rate than D2095, although 6 days post-infection most of the larvae were dead. Infection with the same number of cells by mucoid D2095 caused larval death by day 4. The decreased expression of genes involved in carbon and nitrogen metabolism may reflect lower metabolic needs of D2214 caused by lack of exopolysaccharide, but also by the attenuation of pathways not required for survival. As a result, D2214 showed higher survival than D2095 in minimal medium for 28 days under aerobic conditions. Overall, adaptation during Bcc chronic lung infections gave rise to genotypic and phenotypic variation among isolates, contributing to their fitness while maintaining their capacity for survival in this opportunistic human niche

M-Theory Phenomenology and See-Saw Mechanisms

A version of M-theory phenomenology is proposed in which the symmetry is based on the group $SO(10) \times SO(10) \times SO(10) \times U(1) \times U(1)$. Each SO(10) group acts on a single generation. The $U(1) \times U(1)$ is regarded as the hidden sector symmetry group. The supersymmetry is broken in the hidden sector by the Fayet-Iliopoulos $D$-term for each group. The $D$-term is needed also to circumvent the powerful non-renormalization theorem since the $SO(10) \times SO(10) \times SO(10)$ is broken down to the usual SO(10) by the pair condensation of certain messenger sector multiplets. The exchange of U(1) gauge bosons gives an attractive force for the pair to be created and condensed. The off-diagonal mass matrix elements among the generations in these messenger sector multiplets are the source of the flavor dynamics including the CP violation. The pair condensation of another multiplet in the messenger sector leads to the doublet-triplet splitting. The SO(10) decuplet Higgs couples only to one of the generations. The other couplings should, therefore, be calculated as higher order corrections. We present our preliminary results on the calculation of the mass matrices and the mixing angles for leptons and quarks in this model.Comment: 19 pages, 16 figures, Talk given at Neutrino Mass and See-Saw Mechanism, Fujihara Semina

Protegen: a web-based protective antigen database and analysis system

Protective antigens are specifically targeted by the acquired immune response of the host and are able to induce protection in the host against infectious and non-infectious diseases. Protective antigens play important roles in vaccine development, as biological markers for disease diagnosis, and for analysis of fundamental host immunity against diseases. Protegen is a web-based central database and analysis system that curates, stores and analyzes protective antigens. Basic antigen information and experimental evidence are curated from peer-reviewed articles. More detailed gene/protein information (e.g. DNA and protein sequences, and COG classification) are automatically extracted from existing databases using internally developed scripts. Bioinformatics programs are also applied to compute different antigen features, such as protein weight and pI, and subcellular localizations of bacterial proteins. Presently, 590 protective antigens have been curated against over 100 infectious diseases caused by pathogens and non-infectious diseases (including cancers and allergies). A user-friendly web query and visualization interface is developed for interactive protective antigen search. A customized BLAST sequence similarity search is also developed for analysis of new sequences provided by the users. To support data exchange, the information of protective antigens is stored in the Vaccine Ontology (VO) in OWL format and can also be exported to FASTA and Excel files. Protegen is publically available at http://www.violinet.org/protegen