6 research outputs found
Degenerate target sites mediate rapid primed CRISPR adaptation
- Author
- Publication venue
- 'Proceedings of the National Academy of Sciences'
- Publication date
- Field of study
Human Liver Cell Trafficking Mutants: Characterization and Whole Exome Sequencing
- Author
- A McKenna
- A Persico
- AB Novikoff
- AH Hutagalung
- Allan W. Wolkoff
- AM Szperl
- Barry Potvin
- BD Grant
- CA Lamb
- CW Lo
- David C. Spray
- E Mizuno-Yamasaki
- Erik L. Snapp
- Fei Yuan
- GJ Doherty
- H Li
- H Stenmark
- IA Adzhubei
- JA MacGurn
- JD Pedelacq
- JF Presley
- JG Magadan
- L Lefrancois
- M Kauppi
- MA Rodriguez
- MG Roth
- Michael Koval
- MM Thi
- P Cingolani
- P Hilgard
- P Watson
- Pamela Stanley
- PC Ng
- Phyllis M. Novikoff
- R Mesa
- R Weigert
- RJ Stockert
- RJ Stockert
- RJ Stockert
- S Eathiraj
- SB Ng
- SR Pfeffer
- Sylvia O. Suadicani
- T Huang
- T Wang
- W Westbroek
- X Shi
- X Yi
- Y Erlich
- Publication venue
- 'Public Library of Science (PLoS)'
- Publication date
- Field of study
Trafficking of the Menkes copper transporter ATP7A is regulated by clathrin-, AP-2-, AP-1-, and Rab22-dependent steps
- Author
- Altschuler Y
- Anthony P. Monaco
- Antonio Velayos-Baeza
- Balamurugan K
- Barral DC
- Bhatnagar A
- Bonifacino JS
- Chaudhuri R
- Choudhury A
- Clotilde Levecque
- Cobbold C
- Cobbold C
- D'Amico A
- Damke H
- Delevoye C
- Elizabeth Sztul
- Ford MG
- Fraile-Ramos A
- Francis MJ
- Gareth J. Howell
- Glebov OO
- Goodyer ID
- Greenough M
- Hansen CG
- Harris ED
- Hinners I
- Holloway ZG
- Ishizaki H
- Judith Klumperman
- Kauppi M
- Kelly BT
- Kennerson ML
- Kim SJ
- Kirchhausen T
- Kozik P
- Kuhlbrandt W
- Lane C
- Lefkowitz RJ
- Levecque C
- Lou X
- Lutsenko S
- Macia E
- Magadan JG
- Mallard F
- Marks B
- Mercer JF
- Mesa R
- Meyer C
- Moore CA
- Motley A
- Murphy JE
- Nankoe SR
- Nelson DS
- Nilsson T
- Nyasae L
- Otto GP
- Pase L
- Pena MM
- Petris MJ
- Petris MJ
- Petris MJ
- Puthenveedu MA
- Razani B
- Robinson MS
- Rodriguez-Gabin A
- Rodriguez-Gabin AG
- Schlief ML
- Schlierf B
- Schramm NL
- Schwartz SL
- Setty SR
- Simonsen A
- Singleton WC
- Sreenivasan Ponnambalam
- Stenmark H
- Steveson TC
- Strausak D
- Traub LM
- Tümer Z
- Uauy R
- van der Bliek AM
- Veldhuis NA
- Vickery RG
- Wang Q
- Weigert R
- Yamaguchi Y
- Yi L
- Zerial M
- Zoe G. Holloway
- Publication venue
- 'American Society for Cell Biology (ASCB)'
- Publication date
- 01/06/2013
- Field of study
The transporter ATP7A mediates systemic copper absorption and provides cuproenzymes in the trans-Golgi network (TGN) with copper. To regulate metal homeostasis, ATP7A constitutively cycles between the TGN and plasma membrane (PM). ATP7A trafficking to the PM is elevated in response to increased copper load and is reversed when copper concentrations are lowered. Molecular mechanisms underlying this trafficking are poorly understood. We assess the role of clathrin, adaptor complexes, lipid rafts, and Rab22a in an attempt to decipher the regulatory proteins involved in ATP7A cycling. While RNA interference (RNAi)–mediated depletion of caveolin 1/2 or flotillin had no effect on ATP7A localization, clathrin heavy chain depletion or expression of AP180 dominant-negative mutant not only disrupted clathrin-regulated pathways, but also blocked PM-to-TGN internalization of ATP7A. Depletion of the μ subunits of either adaptor protein-2 (AP-2) or AP-1 using RNAi further provides evidence that both clathrin adaptors are important for trafficking of ATP7A from the PM to the TGN. Expression of the GTP-locked Rab22aQ64L mutant caused fragmentation of TGN membrane domains enriched for ATP7A. These appear to be a subdomain of the mammalian TGN, showing only partial overlap with the TGN marker golgin-97. Of importance, ATP7A remained in the Rab22aQ64L-generated structures after copper treatment and washout, suggesting that forward trafficking out of this compartment was blocked. This study provides evidence that multiple membrane-associated factors, including clathrin, AP-2, AP-1, and Rab22, are regulators of ATP7A trafficking
Rivaroxaban or aspirin for patent foramen ovale and embolic stroke of undetermined source: a prespecified subgroup analysis from the NAVIGATE ESUS trial
- Author
- Abdelhamid N.
- Abdul Rahman D.
- Abdul-Saheb M.
- Abreu P.
- Abroskina M.
- Abu Ahmad F.
- Accassat S.
- Acciaresi M.
- Adami A.
- Ahmad N.
- Ahmed F.
- Alberto Hawkes M.
- Alemseged F.
- Ali A.
- Altavilla R.
- Alwis L.
- Amarenco P.
- Amaro S.
- Amaya Sanchez L. E.
- Amelia Pinto A.
- Ameriso S. F.
- Ameriso Sebastian F
- Amin H.
- Amino T.
- Amjad A. K.
- Anagnostou E.
- Andersen G.
- Anderson C.
- Anderson D. C.
- Andrea Falco M.
- Andres Mackinnon F.
- Andreu D.
- Androulakis M.
- Angel Gamero M.
- Angel Saredo G.
- Angeles Diaz R.
- Angels Font M.
- Anticoli S.
- Arauz Gongora A. A.
- Arauz A.
- Araya P.
- Arenillas Lara J. F.
- Arias Rivas S.
- Arnold M.
- Augustin S.
- Avelar W.
- Azevedo E.
- Babikian V.
- Bacellar A.
- Badalyan K.
- Bae H. J.
- Baez Martinez E. M.
- Bagelmann H.
- Bailey P.
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- Baker M.
- Balazs A.
- Baldaranov D.
- Balogun I.
- Balueva T.
- Bangdiwala Shrikant
- Bankuti Z.
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- Baranowska A.
- Bardutzky J.
- Barker Trejo S.
- Barlinn J.
- Baronnet F.
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- Bathe-Peters R.
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- Batur Caglayan H.
- Baumgartner P.
- Bazan R.
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- Publication venue
- 'Elsevier BV'
- Publication date
- 01/01/2018
- Field of study
Background: Patent foramen ovale (PFO) is a contributor to embolic stroke of undetermined source (ESUS). Subgroup analyses from previous studies suggest that anticoagulation could reduce recurrent stroke compared with antiplatelet therapy. We hypothesised that anticoagulant treatment with rivaroxaban, an oral factor Xa inhibitor, would reduce the risk of recurrent ischaemic stroke compared with aspirin among patients with PFO enrolled in the NAVIGATE ESUS trial. Methods: NAVIGATE ESUS was a double-blinded, randomised, phase 3 trial done at 459 centres in 31 countries that assessed the efficacy and safety of rivaroxaban versus aspirin for secondary stroke prevention in patients with ESUS. For this prespecified subgroup analysis, cohorts with and without PFO were defined on the basis of transthoracic echocardiography (TTE) and transoesophageal echocardiography (TOE). The primary efficacy outcome was time to recurrent ischaemic stroke between treatment groups. The primary safety outcome was major bleeding, according to the criteria of the International Society of Thrombosis and Haemostasis. The primary analyses were based on the intention-to-treat population. Additionally, we did a systematic review and random-effects meta-analysis of studies in which patients with cryptogenic stroke and PFO were randomly assigned to receive anticoagulant or antiplatelet therapy. Findings: Between Dec 23, 2014, and Sept 20, 2017, 7213 participants were enrolled and assigned to receive rivaroxaban (n=3609) or aspirin (n=3604). Patients were followed up for a mean of 11 months because of early trial termination. PFO was reported as present in 534 (7·4%) patients on the basis of either TTE or TOE. Patients with PFO assigned to receive aspirin had a recurrent ischaemic stroke rate of 4·8 events per 100 person-years compared with 2·6 events per 100 person-years in those treated with rivaroxaban. Among patients with known PFO, there was insufficient evidence to support a difference in risk of recurrent ischaemic stroke between rivaroxaban and aspirin (hazard ratio [HR] 0·54; 95% CI 0·22–1·36), and the risk was similar for those without known PFO (1·06; 0·84–1·33; pinteraction=0·18). The risks of major bleeding with rivaroxaban versus aspirin were similar in patients with PFO detected (HR 2·05; 95% CI 0·51–8·18) and in those without PFO detected (HR 2·82; 95% CI 1·69–4·70; pinteraction=0·68). The random-effects meta-analysis combined data from NAVIGATE ESUS with data from two previous trials (PICSS and CLOSE) and yielded a summary odds ratio of 0·48 (95% CI 0·24–0·96; p=0·04) for ischaemic stroke in favour of anticoagulation, without evidence of heterogeneity. Interpretation: Among patients with ESUS who have PFO, anticoagulation might reduce the risk of recurrent stroke by about half, although substantial imprecision remains. Dedicated trials of anticoagulation versus antiplatelet therapy or PFO closure, or both, are warranted. Funding: Bayer and Janssen
A Systems-Level Interrogation Identifies Regulators of Drosophila Blood Cell Number and Survival
- Author
- A Bianco
- A Friedman
- A Nakashima
- A Parihar
- A Thompson
- A Vinayagam
- AA Friedman
- AD Vrailas
- AE Oro
- AI Munier
- AJ Andres
- AK Vettaikkorumakankauv
- AL Means
- AL Parks
- AN Kettenbach
- AR Learte
- B Benmimoun
- B Lemaitre
- B Scheijen
- B Stevens
- B Stramer
- BA Hay
- BC Mondal
- BC Mondal
- BD Manning
- Brandy Alexander
- C Billottet
- C Jiang
- C Van Hoof
- CD Britten
- CH Yi
- CJ Evans
- CR Stumpf
- CS Thummel
- CY Lee
- CY Lee
- CY Lee
- D Hanahan
- D Rosin
- D Silvera
- D Sims
- DC Goberdhan
- DD Sarbassov
- DL Lindstrom
- DR Green
- E Nogueira
- EC Breen
- EH Baehrecke
- EL Huttlin
- G Echalier
- G Orphanides
- G Roesijadi
- GC McAlister
- GI Owen
- H Chung
- H Luo
- H Rodriguez-Magadan
- HE Thomas
- HJ Hsu
- HL Brown
- HP Gerber
- J Bastien
- J Colombani
- J Huang
- J Rappsilber
- J Shim
- J Villen
- JA Hoffmann
- JA Martinez-Agosto
- JA McCubrey
- JA McDonald
- JC Clemens
- JE Elias
- JKM A.L. Eng
- JT Opferman
- JV Olsen
- JW Tamkun
- K Brückner
- K King-Jones
- K King-Jones
- Kalpana Makhijani
- Katja Brückner
- KF Rewitz
- KM Wright
- KS Gold
- L Altucci
- L Altucci
- L Cherbas
- L Cherbas
- L Cherbas
- L Cherbas
- L Dayon
- L Goyal
- L Gutierrez
- L Kockel
- LK Ashman
- LM Kelly
- M Bettencourt-Dias
- M Bjorklund
- M Boutros
- M Buszczak
- M Buszczak
- M Dragojlovic-Munther
- M Hild
- M Kim
- M Marin-Hincapie
- M Schubiger
- MB Eisen
- MC Mendoza
- MD Adams
- MM Kulkarni
- MR Koelle
- N Bushue
- N Dephoure
- N Ferrara
- N Perrimon
- N Remillieux-Leschelle
- NK Cho
- Norbert Perrimon
- O Papoulas
- P Duchek
- P Meier
- P van der Geer
- PJ Coffer
- PP Hsu
- R Rosset
- R Zoncu
- Richelle Sopko
- RJ Lin
- RP Sorrentino
- RT Kurmasheva
- RV Hoch
- S Barolo
- S Chittaranjan
- S Ishimaru
- S Xue
- SA Beausoleil
- SA Ross
- SK Chew
- T Glatter
- T Kozlova
- T Kozlova
- T Lee
- T Matsuki
- TA Tran
- TL Pritchett
- TP Yao
- TR Wilson
- Utpal Banerjee
- V Hartenstein
- V Janssens
- VM Chavez
- W Brogiolo
- Y Wu
- Y Yu
- Y Zhang
- YH Wang
- YJ Choi
- You Bin Lin
- Z Gauhar
- ZE Kilpatrick
- Publication venue
- 'Public Library of Science (PLoS)'
- Publication date
- Field of study
Rivaroxaban or aspirin for patent foramen ovale and embolic stroke of undetermined source: a prespecified subgroup analysis from the NAVIGATE ESUS trial
- Author
- A Adami
- A Ali
- A Amelia Pinto
- A Arauz
- A Bacellar
- A Balazs
- A Baranowska
- A Barulin
- A Beinlich
- A Belkin
- A Benjamin
- A Cavallini
- A Chakrabarti
- A Chamorro
- A Corlobe
- A Csanyi
- A Czlonkowska
- A Daineko
- A Danese
- A De Havenon
- A De Pauw
- A De Smedt
- A Del Giudice
- A Dávalos
- A Favate
- A Fedin
- A Ferreira
- A Filipov
- A Firstenfeld
- A Fraczek
- A Friedman
- A Furlan
- A Gallina
- A Garcia Pastor
- A Gil Nunez
- A Glabinski
- A Gomes Neto
- A Gueguen
- A Hajas
- A Hassan
- A Hatzitolios
- A Horev
- A Irina Aniculaesei
- A Jagolino
- A Jun-Oconnell
- A Katalin Iljicsov
- A Kei
- A Khanna
- A Khaw
- A Kobayashi
- A Koutroubi
- A Kulakowska
- A Kuris
- A Lago
- A Landolfi
- A Lasek-Bal
- A Leger
- A Lindgren
- A Lord
- A Lvova
- A Mackey
- A Magadan
- A Mahagney
- A Majid
- A Majjhoo
- A Maria Lorenzo
- A Maria Roa
- A Matoltsy
- A Maud
- A Mayr
- A Mensch
- A Mismas
- A Mistri
- A Moey
- A Molis
- A Morales
- A Mowla
- A Murtuzova
- A Nave
- A Obrezan
- A Odyniec
- A Papagiannis
- A Penn
- A Persico
- A Pidal
- A Pieroni
- A Polyakov
- A Polymeris
- A Poppe
- A Radtke
- A Rani
- A Rasheed Nihara
- A Renu
- A Rocco
- A Rodriguez Campello
- A Roldan
- A Ruiz Franco
- A Sabet
- A Sarraj
- A Sas
- A Semerano
- A Sharrief
- A Shmonin
- A Shoamanesh
- A Shuaib
- A Shulga
- A Simpkins
- A Smolkin
- A Smyth
- A Sobota
- A Stoll
- A Stumpp
- A Szekely
- A Tamayo
- A Tapanainen
- A Tayal
- A Terentiou
- A Thomson
- A Tinchon
- A Tountopoulou
- A Trommer
- A Tutaj
- A Valikovics
- A Vasco Salgado
- A Vila
- A Wach-Klink
- A Wacongne
- A Winkler
- A Winska-Tereszkiewicz
- A Wisniewska
- A Wlodek
- A Wojnarowska-Arendt
- A Wong
- A Ximenez-Carrillo
- A Yongwon Jin
- A Zitzmann
- AA Arauz Gongora
- AA Silva
- AB Constantino Silva
- AK Amjad
- AM Iglesias Mohedano
- Anderson
- Arne Lindgren
- Ashkan Shoamanesh
- B Blazejewska-Hyzorek
- B Buck
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- B Clissold
- B Coull
- B Delpont
- B Elena Halac
- B Escribano
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- B Fuentes Gimeno
- B Guillon
- B Hobson
- B Huber
- B Joachim
- B Kaczorowska
- B Lajos
- B Lara Rodriguez
- B Lohninger
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- B Nazliel
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- B Nowak
- B Piechowski-Jozwiak
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- B Sanz Cuesta
- B Singh
- B Sliwinska
- B Voglsperger
- B Weller
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- Balakumar Swaminathan
- BC Lee
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- CS Chung
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- D Goldemund
- D Green
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- D Hargroves
- D Herrero
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- DI Chang
- Di Tullio
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- SI Sohn
- SJ Connolly
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- T Bicsak
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- T Chen
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- T Duman
- T Field
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- T Hayashi
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