Large-amplitude internal waves sustain coral health during thermal stress

Ocean warming is a major threat for coral reefs causing widespread coral bleaching and mortality. Potential refugia are thus crucial for coral survival. Exposure to large-amplitude internal waves (LAIW) mitigated heat stress and ensured coral survival and recovery during and after an extreme heat anomaly. The physiological status of two common corals, Porites lutea and Pocillopora meandrina, was monitored in host and symbiont traits, in response to LAIW-exposure throughout the unprecedented 2010 heat anomaly in the Andaman Sea. LAIW-exposed corals of both species survived and recovered, while LAIW-sheltered corals suffered partial and total mortality in P. lutea and P. meandrina, respectively. LAIW are ubiquitous in the tropics and potentially generate coral refuge areas. As thermal stress to corals is expected to increase in a warming ocean, the mechanisms linking coral bleaching to ocean dynamics will be crucial to predict coral survival on a warming plane

All you can eat: the functional response of the cold-water coral Desmophyllum dianthus feeding on krill and copepods

The feeding behavior of the cosmopolitan cold-water coral (CWC) Desmophyllum dianthus (Cnidaria: Scleractinia) is still poorly known. Its usual deep distribution restricts direct observations, and manipulative experiments are so far limited to prey that do not occur in CWC natural habitat. During a series of replicated incubations, we assessed the functional response of this coral feeding on a medium-sized copepod (Calanoides patagoniensis) and a large euphausiid (Euphausia vallentini). Corals showed a Type I functional response, where feeding rate increased linearly with prey abundance, as predicted for a tentaculate passive suspension feeder. No significant differences in feeding were found between prey items, and corals were able to attain a maximum feeding rate of 10.99 mg C h−1, which represents an ingestion of the 11.4% of the coral carbon biomass per hour. These findings suggest that D. dianthus is a generalist zooplankton predator capable of exploiting dense aggregations of zooplankton over a wide prey size-range

Lipid biomarkers reveal trophic relationships and energetic trade‐offs in contrasting phenotypes of the cold‐water coral Desmophyllum dianthus in Comau Fjord, Chile

Benthic suspension feeders like corals and sponges are important bioengineers in many marine habitats, from the shallow tropics to the depth of polar oceans. While they are generally considered opportunistic, little is known about their actual in situ diet. To tackle this limitation, fatty acid trophic markers (FATMs) have been employed to gain insights into the composition of their diet. Yet, these in situ studies have not been combined with physiological investigations to understand how physiological limitations may modulate the biochemistry of these organisms. Here, we used the cold-water coral (CWC) Desmophyllum dianthus in its natural habitat in Comau Fjord (Northern Patagonia, Chile) as our model species to assess the trophic ecology in response to contrasting physico-chemical conditions (variable vs. stable) and ecological drivers (food availability) at three shallow sites and one deep site. We took advantage of the expression of two distinct phenotypes with contrasting performance (growth, biomass, respiration) coinciding with the differences in sampling depth. We analysed the corals' fatty acid composition to evaluate the utility of FATM profiles to gain dietary insights and assess how performance trade-offs potentially modulate an organism's FATM composition. We found that 20:1(n-9) zooplankton markers dominated the deep high-performance phenotype, while 20:5(n-3) and 22:6(n-3) diatom and flagellate markers, respectively, are more prominent in shallow low-performance phenotype. Surprisingly, both energy stores and performance were higher in the deep phenotype, in spite of measured lower zooplankton availability. Essential FA concentrations were conserved across sites, likely reflecting required levels for coral functioning and survival. While the deep high-performance phenotype met with these requirements, the low-performance phenotype appeared to need more energy to maintain functionality in its highly variable environment, potentially causing intrinsic re-allocations of energy and enrichment in certain essential markers (20:5(n-3), 22:6(n-3)). Our analysis highlights the biological and ecological insights that can be gained from FATM profiles in CWCs, but also cautions the reliability of FATM as diet tracers under limiting environmental conditions that may also be applicable to other marine organisms. Read the free Plain Language Summary for this article on the Journal blog

Impacts of Warming and Acidification on Coral Calcification Linked to Photosymbiont Loss and Deregulation of Calcifying Fluid pH

Corals are globally important calcifiers that exhibit complex responses to anthropogenic warming and acidification. Although coral calcification is supported by high seawater pH, photosynthesis by the algal symbionts of zooxanthellate corals can be promoted by elevated pCO2. To investigate the mechanisms underlying corals’ complex responses to global change, three species of tropical zooxanthellate corals (Stylophora pistillata, Pocillopora damicornis, and Seriatopora hystrix) and one species of asymbiotic cold-water coral (Desmophyllum pertusum, syn. Lophelia pertusa) were cultured under a range of ocean acidification and warming scenarios. Under control temperatures, all tropical species exhibited increased calcification rates in response to increasing pCO2. However, the tropical species’ response to increasing pCO2 flattened when they lost symbionts (i.e., bleached) under the high-temperature treatments—suggesting that the loss of symbionts neutralized the benefit of increased pCO2 on calcification rate. Notably, the cold-water species that lacks symbionts exhibited a negative calcification response to increasing pCO2, although this negative response was partially ameliorated under elevated temperature. All four species elevated their calcifying fluid pH relative to seawater pH under all pCO2 treatments, and the magnitude of this offset (Δ[H+]) increased with increasing pCO2. Furthermore, calcifying fluid pH decreased along with symbiont abundance under thermal stress for the one species in which calcifying fluid pH was measured under both temperature treatments. This observation suggests a mechanistic link between photosymbiont loss (‘bleaching’) and impairment of zooxanthellate corals’ ability to elevate calcifying fluid pH in support of calcification under heat stress. This study supports the assertion that thermally induced loss of photosymbionts impairs tropical zooxanthellate corals’ ability to cope with CO2-induced ocean acidification

Breast cancer risk variants at 6q25 display different phenotype associations and regulate ESR1, RMND1 and CCDC170.

We analyzed 3,872 common genetic variants across the ESR1 locus (encoding estrogen receptor α) in 118,816 subjects from three international consortia. We found evidence for at least five independent causal variants, each associated with different phenotype sets, including estrogen receptor (ER(+) or ER(-)) and human ERBB2 (HER2(+) or HER2(-)) tumor subtypes, mammographic density and tumor grade. The best candidate causal variants for ER(-) tumors lie in four separate enhancer elements, and their risk alleles reduce expression of ESR1, RMND1 and CCDC170, whereas the risk alleles of the strongest candidates for the remaining independent causal variant disrupt a silencer element and putatively increase ESR1 and RMND1 expression.This is the author accepted manuscript. The final version is available from Nature Publishing Group via http://dx.doi.org/10.1038/ng.352

Polymorphisms in a Putative Enhancer at the 10q21.2 Breast Cancer Risk Locus Regulate NRBF2 Expression.

Genome-wide association studies have identified SNPs near ZNF365 at 10q21.2 that are associated with both breast cancer risk and mammographic density. To identify the most likely causal SNPs, we fine mapped the association signal by genotyping 428 SNPs across the region in 89,050 European and 12,893 Asian case and control subjects from the Breast Cancer Association Consortium. We identified four independent sets of correlated, highly trait-associated variants (iCHAVs), three of which were located within ZNF365. The most strongly risk-associated SNP, rs10995201 in iCHAV1, showed clear evidence of association with both estrogen receptor (ER)-positive (OR = 0.85 [0.82-0.88]) and ER-negative (OR = 0.87 [0.82-0.91]) disease, and was also the SNP most strongly associated with percent mammographic density. iCHAV2 (lead SNP, chr10: 64,258,684:D) and iCHAV3 (lead SNP, rs7922449) were also associated with ER-positive (OR = 0.93 [0.91-0.95] and OR = 1.06 [1.03-1.09]) and ER-negative (OR = 0.95 [0.91-0.98] and OR = 1.08 [1.04-1.13]) disease. There was weaker evidence for iCHAV4, located 5' of ADO, associated only with ER-positive breast cancer (OR = 0.93 [0.90-0.96]). We found 12, 17, 18, and 2 candidate causal SNPs for breast cancer in iCHAVs 1-4, respectively. Chromosome conformation capture analysis showed that iCHAV2 interacts with the ZNF365 and NRBF2 (more than 600 kb away) promoters in normal and cancerous breast epithelial cells. Luciferase assays did not identify SNPs that affect transactivation of ZNF365, but identified a protective haplotype in iCHAV2, associated with silencing of the NRBF2 promoter, implicating this gene in the etiology of breast cancer.This is the author accepted manuscript. The final version is available from Elsevier via http://dx.doi.org/10.1016/j.ajhg.2015.05.002

Auto- and heterotrophic responses of the coral Porites lutea to large amplitude internal waves

Large amplitude internal waves (LAIW) cause frequent and severe changes in the physico-chemical environment of Andaman Sea coral reefs and are a potentially important source of disturbance for corals. To explore the coral response to LAIW, prey capture disposition and photosynthesis were investigated in relation to changes in seawater temperature, pH, flow speed, and food availability in LAIW simulation studies under controlled laboratory conditions, using Porites lutea as a model organism. Although food presence stimulated polyp expansion, we found an overriding effect of low temperature (19°C) causing retraction of the coral polyps into their calices, particularly when pH was altered concomitantly. Decreases in pH alone, however, caused the expansion of the polyps. The exposure history of the colonies played a crucial role in coral responses: prior field exposure to LAIW yielded lower retraction levels than in LAIW-inexperienced corals, suggesting acclimatization. Low temperature (19°C) exposure did not seem to influence the photosynthetic performance, but LAIW-experienced corals showed higher values of maximum dark adapted quantum yield (Fv/Fm) of photosystem II (PSII) than LAIW-inexperienced controls. Collectively, these data suggest that P. lutea, the dominant hermatypic coral in the Andaman Sea, can acclimatize to extreme changes in its abiotic environment by modulating its mixotrophic nutrition through polyp expansion and potential feeding as well as its photosynthetic efficiency