InSAR reveals land deformation at Guangzhou and Foshan, China between 2011 and 2017 with COSMO-SkyMed data

Subsidence from groundwater extraction and underground tunnel excavation has been known for more than a decade in Guangzhou and Foshan, but past studies have only monitored the subsidence patterns as far as 2011 using InSAR. In this study, the deformation occurring during the most recent time-period between 2011 and 2017 has been measured using COSMO-SkyMed (CSK) to understand if changes in temporal and spatial patterns of subsidence rates occurred. Using InSAR time-series analysis (TS-InSAR), we found that significant surface displacement rates occurred in the study area varying from -35 mm/year (subsidence) to 10 mm/year (uplift). The 2011-2017 TS-InSAR results were compared to two separate TS-InSAR analyses (2011-2013, and 2013-2017). Our CSK TS-InSAR results are in broad agreement with previous ENVISAT results and levelling data, strengthening our conclusion that localised subsidence phenomena occurs at different locations in Guangzhou and Foshan. A comparison between temporal and spatial patterns of deformations from our TS-InSAR measurements and different land use types in Guangzhou shows that there is no clear relationship between them. Many local scale deformation zones have been identified related to different phenomena. The majority of deformations is related to excessive groundwater extraction for agricultural and industrial purposes but subsidence in areas of subway construction also occurred. Furthermore, a detailed analysis on the sinkhole collapse in early 2018 has been conducted, suggesting that surface loading may be a controlling factor of the subsidence, especially along the road and highway. Roads and highways with similar subsidence phenomenon are identified. Continuous monitoring of the deforming areas identified by our analysis is important to measure the magnitude and spatial pattern of the evolving deformations in order to minimise the risk and hazards of land subsidence

An easterly tip jet off Cape Farewell, Greenland. I: Aircraft observations

An easterly tip jet event off Cape Farewell, Greenland, is described and analysed in considerable detail. In Part I of this study (this paper) comprehensive aircraft-based observations are described, while in Part II of this study numerical simulations and a dynamical analysis are presented. The easterly tip jet of 21 February 2007 took place during the Greenland Flow Distortion experiment. It resulted through the interaction of a barotropic synoptic-scale low pressure system in the central North Atlantic and the high topography of southern Greenland. In situ observations reveal a jet core at the coast with peak winds of almost 50 m s-1, about 600–800 m above the sea surface, and of 30 m s-1 at 10 m. The depth of the jet increased with wind speed from ~1500 m to ~2500 m as the peak winds increased from 30 to 50 m s-1. The jet accelerated and curved anticyclonically as it reached Cape Farewell and the end of the barrier. The easterly tip jet was associated with a tongue of cold and dry air along the coast of southeast Greenland, general cloud cover to the east, and cloud streets to the south of Cape Farewell. Precipitation was observed during the low-level components of the flight. The very high wind speeds generated a highly turbulent atmospheric boundary layer and resulted in some of the highest surface wind stresses ever observed over the ocean

Phenotypic and functional analyses show stem cell-derived hepatocyte-like cells better mimic fetal rather than adult hepatocytes

Background & Aims: Hepatocyte-like cells (HLCs), differentiated from pluripotent stem cells by the use of soluble factors, can model human liver function and toxicity. However, at present HLC maturity and whether any deficit represents a true fetal state or aberrant differentiation is unclear and compounded by comparison to potentially deteriorated adult hepatocytes. Therefore, we generated HLCs from multiple lineages, using two different protocols, for direct comparison with fresh fetal and adult hepatocytes. Methods: Protocols were developed for robust differentiation. Multiple transcript, protein and functional analyses compared HLCs to fresh human fetal and adult hepatocytes. Results: HLCs were comparable to those of other laboratories by multiple parameters. Transcriptional changes during differentiation mimicked human embryogenesis and showed more similarity to pericentral than periportal hepatocytes. Unbiased proteomics demonstrated greater proximity to liver than 30 other human organs or tissues. However, by comparison to fresh material, HLC maturity was proven by transcript, protein and function to be fetal-like and short of the adult phenotype. The expression of 81% phase 1 enzymes in HLCs was significantly upregulated and half were statistically not different from fetal hepatocytes. HLCs secreted albumin and metabolized testosterone (CYP3A) and dextrorphan (CYP2D6) like fetal hepatocytes. In seven bespoke tests, devised by principal components analysis to distinguish fetal from adult hepatocytes, HLCs from two different source laboratories consistently demonstrated fetal characteristics. Conclusions: HLCs from different sources are broadly comparable with unbiased proteomic evidence for faithful differentiation down the liver lineage. This current phenotype mimics human fetal rather than adult hepatocytes

Bis(2-propyl-1H-imidazol-3-ium) bis­(pyridine-2,6-dicarboxyl­ato-κ3 O 2,N,O 6)cadmate(II)

The title salt, (C6H11N2)2[Cd(C7H3NO4)2], displays a discrete mononuclear structure, in which the central CdII atom is six-coordinated in a distorted octa­hedral coordination geometry by two N and four O atoms from two different pyridine-2,6-dicarboxyl­ate anions in an O 2,N,O 6-tridentate chelation mode. The crystal packing is stabilized by N—H⋯O hydrogen bonds and π–π inter­actions [centroid–centroid distance = 3.576 (5) Å]

AUXIN RESPONSE FACTOR3 Regulates Compound Leaf Patterning by Directly Repressing PALMATE-LIKE PENTAFOLIATA1 Expression in Medicago truncatula

[EN] Diverse leaf forms can be seen in nature. In Medicago truncatula, PALM1 encoding a Cys(2) His(2) transcription factor is a key regulator of compound leaf patterning. PALM1 negatively regulates expression of SGL1, a key regulator of lateral leaflet initiation. However, how PALM1 itself is regulated is not yet known. To answer this question, we used promoter sequence analysis, yeast one-hybrid tests, quantitative transcription activity assays, ChIP-PCR analysis, and phenotypic analyses of overexpression lines and mutant plants. The results show that M. truncatula AUXIN RESPONSE FACTOR3 (MtARF3) functions as a direct transcriptional repressor of PALM1. MtARF3 physically binds to the PALM1 promoter sequence in yeast cells. MtARF3 selectively interacts with specific auxin response elements (AuxREs) in the PALM1 promoter to repress reporter gene expression in tobacco leaves and binds to specific sequences in the PALM1 promoter in vivo. Upregulation of MtARF3 or removal of both PHANTASTICA (PHAN) and ARGONAUTE7 (AGO7) pathways resulted in compound leaves with five narrow leaflets arranged in a palmate-like configuration. These results support that MtARF3, in addition as an adaxial-abaxial polarity regulator, functions to restrict spatiotemporal expression of PALM1, linking auxin signaling to compound leaf patterning in the legume plant M. truncatula.Funding of this work was provided in part by The Samuel Roberts Noble Foundation and by grants from the Oklahoma Center for Advancement of Science and Technology (OCAST; PS12-036 and PS16-034) and the National Science Foundation (IOS-1127155). The laboratory of FM was funded by the Spanish Ministerio de Economia y Competitividad and FEDER (BIO2015-64307-R) and the Generalitat Valenciana (ACOMP2012-099).Peng, J.; Berbel Tornero, A.; Madueño Albi, F.; Chen, R. (2017). 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Expanding the phenotypic spectrum consequent upon de novo WDR37 missense variants.

Structural eye disorders are increasingly recognised as having a genetic basis, although current genetic testing is limited in its success. De novo missense variants in WDR37 are a recently described cause of a multisystemic syndromic disorder featuring ocular coloboma. This study characterises the phenotypic spectrum of this disorder and reports 2 de novo heterozygous variants (p.Thr115Ile, p.Ser119Tyr) in three unrelated Caucasian individuals. All had a clinical phenotype consisting of bilateral iris and retinal coloboma, developmental delay and additional, variable multisystem features. The variants fall within a highly conserved region upstream of the WD-repeat domains, within an apparent mutation cluster. Consistent with the literature, intellectual disability, structural eye disorders, epilepsy, congenital heart disease, genitorenal anomalies and dysmorphic facial features were observed. In addition, a broader developmental profile is reported with a more specific musculoskeletal phenotype described in association with the novel variant (p.Thr115Ile). We further expand the phenotypic spectrum of WDR37-related disorders to include those with milder developmental delay and strengthen the association of ocular coloboma and musculoskeletal features. We promote the inclusion of WDR37 on gene panels for intellectual disability, epilepsy and structural eye disorders

Serum Neurofilament Light is elevated in COVID-19 Positive Adults in the ICU and is associated with Co-Morbid Cardiovascular Disease, Neurological Complications, and Acuity of Illness

In critically ill COVID-19 patients, the risk of long-term neurological consequences is just beginning to be appreciated. While recent studies have identified that there is an increase in structural injury to the nervous system in critically ill COVID-19 patients, there is little known about the relationship of COVID-19 neurological damage to the systemic inflammatory diseases also observed in COVID-19 patients. The purpose of this pilot observational study was to examine the relationships between serum neurofilament light protein (NfL, a measure of neuronal injury) and co-morbid cardiovascular disease (CVD) and neurological complications in COVID-19 positive patients admitted to the intensive care unit (ICU). In this observational study of one-hundred patients who were admitted to the ICU in Tucson, Arizona between April and August 2020, 89 were positive for COVID-19 (COVID-pos) and 11 was COVID-negative (COVID-neg). A healthy control group (n=8) was examined for comparison. The primary outcomes and measures were subject demographics, serum NfL, presence and extent of CVD, diabetes, sequential organ failure assessment score (SOFA), presence of neurological complications, and blood chemistry panel data. COVID-pos patients in the ICU had significantly higher mean levels of Nfl (229.6 ± 163 pg/ml) compared to COVID-neg ICU patients (19.3 ± 5.6 pg/ml), Welch's t-test, p =.01 and healthy controls (12.3 ± 3.1 pg/ml), Welch's t-test p =.005. Levels of Nfl in COVID-pos ICU patients were significantly higher in patients with concomitant CVD and diabetes (n=35, log Nfl 1.6±.09), and correlated with higher SOFA scores (r=.5, p =.001). These findings suggest that in severe COVID-19 disease, the central neuronal and axonal damage in these patients may be driven, in part, by the level of systemic cardiovascular disease and peripheral inflammation. Understanding the contributions of systemic inflammatory disease to central neurological degeneration in these COVID-19 survivors will be important to the design of interventional therapies to prevent long-term neurological and cognitive dysfunction

Plasmodium falciparum Malaria Endemicity in Indonesia in 2010

BACKGROUND: Malaria control programs require a detailed understanding of the contemporary spatial distribution of infection risk to efficiently allocate resources. We used model based geostatistics (MBG) techniques to generate a contemporary map of Plasmodium falciparum malaria risk in Indonesia in 2010. METHODS: Plasmodium falciparum Annual Parasite Incidence (PfAPI) data (2006-2008) were used to map limits of P. falciparum transmission. A total of 2,581 community blood surveys of P. falciparum parasite rate (PfPR) were identified (1985-2009). After quality control, 2,516 were included into a national database of age-standardized 2-10 year old PfPR data (PfPR(2-10)) for endemicity mapping. A Bayesian MBG procedure was used to create a predicted surface of PfPR(2-10) endemicity with uncertainty estimates. Population at risk estimates were derived with reference to a 2010 human population count surface. RESULTS: We estimate 132.8 million people in Indonesia, lived at risk of P. falciparum transmission in 2010. Of these, 70.3% inhabited areas of unstable transmission and 29.7% in stable transmission. Among those exposed to stable risk, the vast majority were at low risk (93.39%) with the reminder at intermediate (6.6%) and high risk (0.01%). More people in western Indonesia lived in unstable rather than stable transmission zones. In contrast, fewer people in eastern Indonesia lived in unstable versus stable transmission areas. CONCLUSION: While further feasibility assessments will be required, the immediate prospects for sustained control are good across much of the archipelago and medium term plans to transition to the pre-elimination phase are not unrealistic for P. falciparum. Endemicity in areas of Papua will clearly present the greatest challenge. This P. falciparum endemicity map allows malaria control agencies and their partners to comprehensively assess the region-specific prospects for reaching pre-elimination, monitor and evaluate the effectiveness of future strategies against this 2010 baseline and ultimately improve their evidence-based malaria control strategies