Surveying viruses on ornamental trees and shrubs in two Hungarian botanical gardens and an arboretum

In Hungary the most common disease of fruit trees causing the most severe damages is Plum pox virus (PPV). This is why it is important to know other woody host plants that can be considered as source of infection. National surveys have been carried out since 2002 for revealing the distribution of PPV on ornamental and wild Prunus species.From 2005 this work has been extended to studying other viruses on other woody plants. In two botanical gardens and an arboretum we selected plants (species and varieties) showing virus symptoms among various thousands of woody plants and submitted them to indexing on woody and herbaceous indicators, as well as to testing with ELISA for the presence of the following 11 viruses occurring on woody plants: PPV, Prune dwarf virus (PDV), Prunus necrotic ringspot virus (PNRSV), Cherry leafroll virus (CLRV), Apple stem pitting virus (ASPV), Apple stem grooving virus (ASGV), Apple mosaic virus (ApMV), Apple chlorotic leafspot virus (ACLSV), Strawberry latent ringspot virus (SLRV), Tomato black ring virus (TBRV) and Arabis mosaic virus (ArMV).Up to now, in 28 plant species and varieties, PPV, PDV, PNRSV, CLRV and ASPV have been detected so far. The presence of PPV was found in 9 species/varieties, such as Prunus cerasifera ’Pendula’, P. cerasifera ’Pissardii’, P. glandulosa, P. glandulosa ‘Alba Plena’, P. glandulosa ’Sinensis’, P. japonica, P. sogdiana, P. tomentosa (from Tibet) and P. x blireana.Seventeen species/varieties were found to be infected with PDV: Lonicera caucasica, L. maackii, L. sachalinensis, Prunus mume ’Omoi-no-mama’, P. salicina (from China), P. spinosa ’Plena’, P. spinosa ’Purpurea’, P. serrulata ’Amanogawa’, P. serrulata ’Ichiyo’, P. serrulata ’Pink Perfection’, P. serrulata ’Taihaku’, P. serrulata ’Yedo-sakura’, P. subhirtella ’Plena’, P. tenella, P. yedoensis, P. yedoensis ’Moerheimii’ and Syringa yunnanensis. Certain species/varieties infected with PDV were positive also for CLRV, such as P. spinosa ’Purpurea’, P. yedoensis, P. yedoensis ’Moerheimii’, P. subhirtella ’Plena’, P. serrulata ’Yedo-sakura’ and to ASPV: P. subhirtella ’Plena’ and P. serrulata ’Yedo-sakura’. PNRSV was detected in P. cerasifera ’ Nigra ’ and ’Hollywood’. The difference of symptoms provoked by PDV on herbaceous hosts suggests that various strains of this virus affect hosts, mainly yellow mottle disease described as a separate strain by Ramaswamy and Posnette on ornamental cherries in 1972. Molecular studies are in progress to confirm the above results. Keywords: ornamental trees and shrubs, virus symptoms, ELISA, Prunus, Lonicera, Syring

Electrocyclization and Unexpected Reactions of Non-Stabilized α,β:γ,δ-Unsaturated Azomethine Ylides: Experimental and Theoretical Studies

This project was supported by National Research, Development and Innovation Fund of Hungary, financed under the (OTKA PD128612) funding scheme. The authors are grateful to the Bolyai Research Scholarship of the Hungarian Academy of Sciences (BO/799/21/7), the ÚNKP-21-5 new National Excellence Program, NVKP-16 (1-2016-0043), KFI-16 (1-2016-0177), KFI-18 (00097) and VKE-18 (00032) of the Ministry for Innovation and Technology from the Source of the National Research, Development and Innovation Fund for financial support

Directed evolution of multiple genomic loci allows the prediction of antibiotic resistance.

Antibiotic development is frequently plagued by the rapid emergence of drug resistance. However, assessing the risk of resistance development in the preclinical stage is difficult. Standard laboratory evolution approaches explore only a small fraction of the sequence space and fail to identify exceedingly rare resistance mutations and combinations thereof. Therefore, new rapid and exhaustive methods are needed to accurately assess the potential of resistance evolution and uncover the underlying mutational mechanisms. Here, we introduce directed evolution with random genomic mutations (DIvERGE), a method that allows an up to million-fold increase in mutation rate along the full lengths of multiple predefined loci in a range of bacterial species. In a single day, DIvERGE generated specific mutation combinations, yielding clinically significant resistance against trimethoprim and ciprofloxacin. Many of these mutations have remained previously undetected or provide resistance in a species-specific manner. These results indicate pathogen-specific resistance mechanisms and the necessity of future narrow-spectrum antibacterial treatments. In contrast to prior claims, we detected the rapid emergence of resistance against gepotidacin, a novel antibiotic currently in clinical trials. Based on these properties, DIvERGE could be applicable to identify less resistance-prone antibiotics at an early stage of drug development. Finally, we discuss potential future applications of DIvERGE in synthetic and evolutionary biology

From taxonomies to ontologies: formalizing generalization knowledge for on-demand mapping

© 2015 Cartography and Geographic Information Society Automation of the cartographic design process is central to the delivery of bespoke maps via the web. In this paper, ontological modeling is used to explicitly represent and articulate the knowledge used in this decision-making process. A use case focuses on the visualization of road traffic accident data as a way of illustrating how ontologies provide a framework by which salient and contextual information can be integrated in a meaningful manner. Such systems are in anticipation of web-based services in which the user knows what they need, but do not have the cartographic ability to get what they want