321 research outputs found
Praktična sinteza regulatora za precizno pozicioniranje sustava pomične podloge
This paper presents a practical feedback controller design of a ball screw-driven table system for the microdisplacement positioning. Friction of the mechanism in the micro-displacement region has nonlinear elastic properties, unlike Coulomb and/or viscous friction in the macro-displacement, resulting in different positioning responses and frequency characteristics of the plant depending on the regions. In this paper, at first, a numerical simulator with a rolling friction model is adopted to reproduce the positioning behaviors in the micro-displacement region. Based on the simulator, the stability condition of positioning in the region is clarified on the basis of frequency characteristics and, then, appropriate parameters of feedback controller are practically designed to satisfy the required positioning performance. Effectiveness of the proposed design has been verified by a series of experiments using a prototype of ball screw-driven table positioning device.U radu je prikazana sinteza regulatora s povratnom vezom u sustavu za precizno linearno pozicioniranje pomične podloge pomoću kugličnih ležajeva. Za razliku od uobičajenih modela Coulombova i/ili viskoznog trenja, trenje razmatranog sustava ima izrazito nelinearna svojstva u području mikro-pomaka, što za posljedicu ima različite odzive pozicioniranja i frekvencijski karakteristike, ovisno o radnom području. U radu je prvo razvijeno numeričko simulacijsko okruženje zasnovano na modelu trenja kotrljanja u svrhu simuliranja ponašanja sustava pozicioniranja u području mikropomaka. Potom je, zasnivajući se na simulacijskom okruženju, pomoću frekvencijske karakteristike razjašnjen problem stabilnosti sustava u promatranom radnom području te su odabrani odgovarajući parametri regulatora koji poštuju uvjet stabilnosti i zadovoljavaju željenu kvalitetu odziva. Sinteza regulatora provedena je vodeći računa o praktičnoj primjenjivosti postupka. Učinkovitost predložene sinteze potvr.ena je nizom eksperimenata na prototipu sustava za precizno linearno pozicioniranje pomične podloge pomoću kugličnih ležajeva
Nonrigid chiral soliton for the octet and decuplet baryons
Systematic treatment of the collective rotation of the nonrigid chiral
soliton is developed in the SU(3) chiral quark soliton model and applied to the
octet and decuplet baryons. The strangeness degrees of freedom are treated by a
simplified bound-state approach which omits the locality of the kaon wave
function. Then, the flavor rotation is divided into the isospin rotation and
the emission and absorption of the kaon. The kaon Hamiltonian is diagonalized
by the Hartree approximation. The soliton changes the shape according to the
strangeness. The baryons appear as the rotational bands of the combined system
of the soliton and the kaon.Comment: 11 pages(LaTex), 1 figures(eps
Extended Hauser-Feshbach Method for Statistical Binary-Decay of Light-Mass Systems
An Extended Hauser-Feshbach Method (EHFM) is developed for light heavy-ion
fusion reactions in order to provide a detailed analysis of all the possible
decay channels by including explicitly the fusion-fission phase-space in the
description of the cascade chain. The mass-asymmetric fission component is
considered as a complex-fragment binary-decay which can be treated in the same
way as the light-particle evaporation from the compound nucleus in
statistical-model calculations. The method of the phase-space integrations for
the binary-decay is an extension of the usual Hauser-Feshbach formalism to be
applied to the mass-symmetric fission part. The EHFM calculations include
ground-state binding energies and discrete levels in the low excitation-energy
regions which are essential for an accurate evaluation of the phase-space
integrations of the complex-fragment emission (fission). In the present
calculations, EHFM is applied to the first-chance binary-decay by assuming that
the second-chance fission decay is negligible. In a similar manner to the
description of the fusion-evaporation process, the usual cascade calculation of
light-particle emission from the highly excited complex fragments is applied.
This complete calculation is then defined as EHFM+CASCADE. Calculated
quantities such as charge-, mass- and kinetic-energy distributions are compared
with inclusive and/or exclusive data for the S+Mg and
Cl+C reactions which have been selected as typical examples.
Finally, the missing charge distributions extracted from exclusive measurements
are also successfully compared with the EHFM+CASCADE predictions.Comment: 34 pages, 6 Figures available upon request, Phys. Rev. C (to be
published
Dasatinib inhibits the growth of molecularly heterogeneous myeloid leukemias.
PURPOSE: Dasatinib is a dual Src/Abl inhibitor recently approved for Bcr-Abl+ leukemias with resistance or intolerance to prior therapy. Because Src kinases contribute to multiple blood cell functions by triggering a variety of signaling pathways, we hypothesized that their molecular targeting might lead to growth inhibition in acute myeloid leukemia (AML).
EXPERIMENTAL DESIGN: We studied growth factor-dependent and growth factor-independent leukemic cell lines, including three cell lines expressing mutants of receptor tyrosine kinases (Flt3 or c-Kit) as well as primary AML blasts for responsiveness to dasatinib.
RESULTS: Dasatinib resulted in the inhibition of Src family kinases in all cell lines and blast cells at approximately 1 x 10(-9) mol/L. It also inhibited mutant Flt3 or Kit tyrosine phosphorylation at approximately 1 x 10(-6) mol/L. Mo7e cells expressing the activating mutation (codon 816) of c-Kit were most sensitive to growth inhibition with a GI(50) of 5 x 10(-9) mol/L. Primary AML blast cells exhibited a growth inhibition of \u3c1 x\u3e10(-6) mol/L. Cell lines that showed growth inhibition at approximately 1 x 10(-6) mol/L showed a G(1) cell cycle arrest and correlated with accumulation of p21 and p27 protein. The addition of rapamycin or cytotoxic agents enhanced growth inhibition. Dasatinib also caused the apoptosis of Mo7e cells expressing oncogenic Kit.
CONCLUSIONS: Although all of the precise targets for dasatinib are not known, this multikinase inhibitor causes either growth arrest or apoptosis in molecularly heterogeneous AML. The addition of cytotoxic or targeted agents can enhance its effects
Instability of the hedgehog shape for the octet baryon in the chiral quark soliton model
In this paper the stability of the hedgehog shape of the chiral soliton is
studied for the octet baryon with the SU(3) chiral quark soliton model. The
strangeness degrees of freedom are treated by a simplified bound-state
approach, which omits the locality of the kaon wave function. The mean field
approximation for the flavor rotation is applied to the model. The classical
soliton changes shape according to the strangeness. The baryon appears as a
rotational band of the combined system of the deformed soliton and the kaon.Comment: 24 pages, LaTeX, 8 eps file
Partially conserved axial current constraints on pion production/absorption within nonrelativistic dynamics
We show the necessity of two-nucleon axial currents and associated pion
emission/ absorption operators for the partial conservation of the axial
current (PCAC) nuclear matrix elements with arbitrary nuclear dynamics
described by a nonrelativistic Schroedinger equation. As examples we construct
such nonrelativistic axial two-body currents in the linear- and heterotic (g_A
= 1.26) sigma models, with an optional isoscalar vector (omega) meson exchange.
The nuclear matrix elements obey PCAC only if the nuclear wave functions used
in the calculation are solutions to the Schroedinger equation with the static
one-meson-exchange potential constructed in the respective (sigma) model. The
same holds true for the nucler pion production amplitude, since it is
proportional to the divergence of the axial current matrix element, by virtue
of PCAC. Thus we found a new consistency condition between the pion
creation/absorption operator and the nuclear Hamiltonian. We present examples
drawn from our models and discuss implications for one-pion-two-nucleon
processes.Comment: 19 pages, 7 figures, submitted to Phys. Rev.
The Gypsy Database (GyDB) of mobile genetic elements: release 2.0
This article introduces the second release of the Gypsy Database of Mobile Genetic Elements (GyDB 2.0): a research project devoted to the evolutionary dynamics of viruses and transposable elements based on their phylogenetic classification (per lineage and protein domain). The Gypsy Database (GyDB) is a long-term project that is continuously progressing, and that owing to the high molecular diversity of mobile elements requires to be completed in several stages. GyDB 2.0 has been powered with a wiki to allow other researchers participate in the project. The current database stage and scope are long terminal repeats (LTR) retroelements and relatives. GyDB 2.0 is an update based on the analysis of Ty3/Gypsy, Retroviridae, Ty1/Copia and Bel/Pao LTR retroelements and the Caulimoviridae pararetroviruses of plants. Among other features, in terms of the aforementioned topics, this update adds: (i) a variety of descriptions and reviews distributed in multiple web pages; (ii) protein-based phylogenies, where phylogenetic levels are assigned to distinct classified elements; (iii) a collection of multiple alignments, lineage-specific hidden Markov models and consensus sequences, called GyDB collection; (iv) updated RefSeq databases and BLAST and HMM servers to facilitate sequence characterization of new LTR retroelement and caulimovirus queries; and (v) a bibliographic server. GyDB 2.0 is available at http://gydb.org
Client applications and Server Side docker for management of RNASeq and/or VariantSeq workflows and pipelines of the GPRO Suite
The GPRO suite is an in-progress bioinformatic project for -omic data
analyses. As part of the continued growth of this project, we introduce a
client side & server side solution for comparative transcriptomics and analysis
of variants. The client side consists of two Java applications called "RNASeq"
and "VariantSeq" to manage workflows for RNA-seq and Variant-seq analysis,
respectively, based on the most common command line interface tools for each
topic. Both applications are coupled with a Linux server infrastructure (named
GPRO Server Side) that hosts all dependencies of each application (scripts,
databases, and command line interface tools). Implementation of the server side
requires a Linux operating system, PHP, SQL, Python, bash scripting, and
third-party software. The GPRO Server Side can be deployed via a Docker
container that can be installed in the user's PC using any operating system or
on remote servers as a cloud solution. The two applications are available as
desktop and cloud applications and provide two execution modes: a Step-by-Step
mode enables each step of a workflow to be executed independently and a
Pipeline mode allows all steps to be run sequentially. The two applications
also feature an experimental support system called GENIE that consists of a
virtual chatbot/assistant and a pipeline jobs panel coupled with an expert
system. The chatbot can troubleshoot issues with the usage of each tool, the
pipeline job panel provides information about the status of each task executed
in the GPRO Server Side, and the expert provides the user with a potential
recommendation to identify or fix failed analyses. The two applications and the
GPRO Server Side combine the user-friendliness and security of client software
with the efficiency of front-end & back-end solutions to manage command line
interface software for RNA-seq and variant-seq analysis via interface
environments
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