Topo-Geometric Filtration Scheme for Geometric Active Contours and Level Sets: Application to Cerebrovascular Segmentation

One of the main problems of the existing methods for the segmentation of cerebral vasculature is the appearance in the segmentation result of wrong topological artefacts such as the kissing vessels. In this paper, a new approach for the detection and correction of such errors is presented. The proposed technique combines robust topological information given by Persistent Homology with complementary geometrical information of the vascular tree. The method was evaluated on 20 images depicting cerebral arteries. Detection and correction success rates were 81.80% and 68.77%, respectively

Relativistic hydrodynamics for heavy-ion collisions

Relativistic hydrodynamics is essential to our current understanding of nucleus-nucleus collisions at ultrarelativistic energies (current experiments at the Relativistic Heavy Ion Collider, forthcoming experiments at the CERN Large Hadron Collider). This is an introduction to relativistic hydrodynamics for graduate students. It includes a detailed derivation of the equations, and a description of the hydrodynamical evolution of a heavy-ion collisions. Some knowledge of thermodynamics and special relativity is assumed.Comment: Lectures given at the Advanced School on Quark-Gluon Plasma, Indian Institute of Technology, Bombay, 3-13 July, 200

Extraction of Airways with Probabilistic State-space Models and Bayesian Smoothing

Segmenting tree structures is common in several image processing applications. In medical image analysis, reliable segmentations of airways, vessels, neurons and other tree structures can enable important clinical applications. We present a framework for tracking tree structures comprising of elongated branches using probabilistic state-space models and Bayesian smoothing. Unlike most existing methods that proceed with sequential tracking of branches, we present an exploratory method, that is less sensitive to local anomalies in the data due to acquisition noise and/or interfering structures. The evolution of individual branches is modelled using a process model and the observed data is incorporated into the update step of the Bayesian smoother using a measurement model that is based on a multi-scale blob detector. Bayesian smoothing is performed using the RTS (Rauch-Tung-Striebel) smoother, which provides Gaussian density estimates of branch states at each tracking step. We select likely branch seed points automatically based on the response of the blob detection and track from all such seed points using the RTS smoother. We use covariance of the marginal posterior density estimated for each branch to discriminate false positive and true positive branches. The method is evaluated on 3D chest CT scans to track airways. We show that the presented method results in additional branches compared to a baseline method based on region growing on probability images.Comment: 10 pages. Pre-print of the paper accepted at Workshop on Graphs in Biomedical Image Analysis. MICCAI 2017. Quebec Cit

Meson - nucleon vertex form factors at finite temperature

In this paper the dependence of meson-nucleon-nucleon vertex form factors is studied as a function of termperature. The results are obtained starting from a zero temperature Bonn potential. The temperature dependence of the vertex form factors and radii is studied in the thermofield dynamics, a real-time operator formalism of finite temperature field theory. It is anticipated that these results will have an impact on the study of relativistic heavy-ion collisions as the critical temperature for the phase transition from hadronic to quark-gluon system is approached.Comment: 19 pages, Revtex, 11 figures (Ps), 171k

Increasing compliance with wearing a medical device in children with autism

Health professionals often recommend the use of medical devices to assess the health, monitor the well-being, or improve the quality of life of their patients. Children with autism may present challenges in these situations as their sensory peculiarities may increase refusals to wear such devices. To address this issue, we systematically replicated prior research by examining the effects of differential reinforcement of other behavior (DRO) to increase compliance with wearing a heart rate monitor in 2 children with autism. The intervention increased compliance to 100% for both participants when an edible reinforcer was delivered every 90 s. The results indicate that DRO does not require the implementation of extinction to increase compliance with wearing a medical device. More research is needed to examine whether the reinforcement schedule can be further thinned

Hydrodynamics near the QCD Phase Transition: Looking for the Longest-Lived Fireball

We propose a new strategy for the experimental search of the QCD phase transition in heavy ion collisions: One may tune collision energy around the point where the lifetime of the fireball is expected to be longest. We demonstrate that the hydrodynamic evolution of excited nuclear matter does change dramatically as the initial energy density goes through the "softest point" (where the pressure to energy density ratio reaches its minimum). For our choice of equation of state, this corresponds to epsilon_i approx. = 1.5 GeV/fm^3 and collision energy E_lab/A approx. = 30 GeV (for Au+Au). Various observables seem to show distinct changes near the softest point.Comment: 7 pages, 3 Postscript figures (tar compressed and uuencoded) submitte

Pion Cloud Contribution to K+ Nucleus Scattering

A careful reanalysis is done of the contribution to $K^{+}$ nucleus scattering from the interaction of the kaon with the virtual pion cloud. The usual approximations made in the evaluation of the related kaon selfenergy are shown to fail badly. We also find new interaction mechanisms which provide appreciable corrections to the kaon selfenergy. Some of these contribute to the imaginary part below pion creation threshold. The inclusion of these new mechanisms in the inelastic part of the optical potential produces a significant improvement in the differential and total $K^{+}$ nuclear cross sections. Uncertainties remain in the dispersive part of the optical potential.Comment: 27 pages, 17 figures (not all of them included, please request them), report UG-DFM-2/9

Fluctuations as probe of the QCD phase transition and freeze-out in heavy ion collisions at LHC and RHIC

We discuss the relevance of higher order moments of net baryon number fluctuations for the analysis of freeze-out and critical conditions in heavy ion collisions at LHC and RHIC. Using properties of O(4) scaling functions, we discuss the generic structure of these higher moments at vanishing baryon chemical potential and apply chiral model calculations to explore their properties at non-zero baryon chemical potential. We show that the ratios of the sixth to second and eighth to second order moments of the net baryon number fluctuations change rapidly in the transition region of the QCD phase diagram. Already at vanishing baryon chemical potential they deviate considerably from the predictions of the hadron resonance gas model which reproduce the second to fourth order moments of the net proton number fluctuations at RHIC. We point out that the sixth order moments of baryon number and electric charge fluctuations remain negative at the chiral transition temperature. Thus, they offer the possibility to probe the proximity of the thermal freeze-out to the crossover line.Comment: 24 pages, 12 EPS files, revised version, to appear in EPJ

Selected nucleon form factors and a composite scalar diquark

A covariant, composite scalar diquark, Fadde'ev amplitude model for the nucleon is used to calculate pseudoscalar, isoscalar- and isovector-vector, axial-vector and scalar nucleon form factors. The last yields the nucleon sigma-term and on-shell sigma-nucleon coupling. The calculated form factors are soft, and the couplings are generally in good agreement with experiment and other determinations. Elements in the dressed-quark-axial-vector vertex that are not constrained by the Ward-Takahashi identity contribute ~20% to the magnitude of g_A. The calculation of the nucleon sigma-term elucidates the only unambiguous means of extrapolating meson-nucleon couplings off the meson mass-shell.Comment: 12 pages, REVTEX, 5 figures, epsfi

Impact of resonance decays on critical point signals in net-proton fluctuations

The non-monotonic beam energy dependence of the higher cumulants of net-proton fluctuations is a widely studied signature of the conjectured presence of a critical point in the QCD phase diagram. In this work we study the effect of resonance decays on critical fluctuations. We show that resonance effects reduce the signatures of critical fluctuations, but that for reasonable parameter choices critical effects in the net-proton cumulants survive. The relative role of resonance decays has a weak dependence on the order of the cumulants studied with a slightly stronger suppression of critical effects for higher-order cumulants