Nilpotent normal form for divergence-free vector fields and volume-preserving maps

We study the normal forms for incompressible flows and maps in the neighborhood of an equilibrium or fixed point with a triple eigenvalue. We prove that when a divergence free vector field in $\mathbb{R}^3$ has nilpotent linearization with maximal Jordan block then, to arbitrary degree, coordinates can be chosen so that the nonlinear terms occur as a single function of two variables in the third component. The analogue for volume-preserving diffeomorphisms gives an optimal normal form in which the truncation of the normal form at any degree gives an exactly volume-preserving map whose inverse is also polynomial inverse with the same degree.Comment: laTeX, 20 pages, 1 figur

THE EFFECTS OF OBSTACLE SHAPE AND VISCOSITY IN DEEP ROTATING FLOW OVER FINITE-HEIGHT TOPOGRAPHY

The limiting process introduced by Stewartson & Cheng (1979) is used to obtain solutions in the limit of vanishing Rossby number for deep rotating flows at arbitrary Reynolds number over cross-stream ridges of finite slope. Examination of inviscid solutions for infinite-depth flow shows strong dependence on obstacle shape of not only the magnitudes but also the positions of disturbances in the far field. In finite-depth flow there is present the Stewartson & Cheng inertial wave wake, which may be expressed as a sum of vertical modes whose amplitudes depend on the obstacle shape but are independent of distance downstream; the smoother the topography and the shallower the flow, the fewer the number of modes required to describe the motion. For abrupt topography the strength of the wake does not, however, decrease monoton- ically with decreasing container depth (or Rossby number). In very deep flows viscosity causes the wake to decay on a length scale of order the Reynolds number times the ridge width. In shallower flows, where only a few modes are present, the decay of the wake is more rapid. For Reynolds numbers and depths of the order of those in the experiments of Hide, Ibbetson & Lighthill (1968)) viscosity causes the disturbance to take on the appearance of a leaning column

Epigenetic memory in induced pluripotent stem cells.

Somatic cell nuclear transfer and transcription-factor-based reprogramming revert adult cells to an embryonic state, and yield pluripotent stem cells that can generate all tissues. Through different mechanisms and kinetics, these two reprogramming methods reset genomic methylation, an epigenetic modification of DNA that influences gene expression, leading us to hypothesize that the resulting pluripotent stem cells might have different properties. Here we observe that low-passage induced pluripotent stem cells (iPSCs) derived by factor-based reprogramming of adult murine tissues harbour residual DNA methylation signatures characteristic of their somatic tissue of origin, which favours their differentiation along lineages related to the donor cell, while restricting alternative cell fates. Such an 'epigenetic memory' of the donor tissue could be reset by differentiation and serial reprogramming, or by treatment of iPSCs with chromatin-modifying drugs. In contrast, the differentiation and methylation of nuclear-transfer-derived pluripotent stem cells were more similar to classical embryonic stem cells than were iPSCs. Our data indicate that nuclear transfer is more effective at establishing the ground state of pluripotency than factor-based reprogramming, which can leave an epigenetic memory of the tissue of origin that may influence efforts at directed differentiation for applications in disease modelling or treatment

In vitro selection of miltefosine resistance in promastigotes of Leishmania donovani from Nepal: genomic and metabolomic characterization.

In this study, we followed the genomic, lipidomic and metabolomic changes associated with the selection of miltefosine (MIL) resistance in two clinically derived Leishmania donovani strains with different inherent resistance to antimonial drugs (antimony sensitive strain Sb-S; and antimony resistant Sb-R). MIL-R was easily induced in both strains using the promastigote-stage, but a significant increase in MIL-R in the intracellular amastigote compared to the corresponding wild-type did not occur until promastigotes had adapted to 12.2 μM MIL. A variety of common and strain-specific genetic changes were discovered in MIL-adapted parasites, including deletions at the LdMT transporter gene, single-base mutations and changes in somy. The most obvious lipid changes in MIL-R promastigotes occurred to phosphatidylcholines and lysophosphatidylcholines and results indicate that the Kennedy pathway is involved in MIL resistance. The inherent Sb resistance of the parasite had an impact on the changes that occurred in MIL-R parasites, with more genetic changes occurring in Sb-R compared with Sb-S parasites. Initial interpretation of the changes identified in this study does not support synergies with Sb-R in the mechanisms of MIL resistance, though this requires an enhanced understanding of the parasite's biochemical pathways and how they are genetically regulated to be verified fully.This study was supported by as part of the FP7 EC K aladrug-R project (http://cordis.europa.eu/project/rcn/88823_en.html, grant number: 222895). JAC and MJS are supported by the Wellcome Trust via their core support for the Wellcome Trust Sanger Institute (grant number 098051) . TMF was funded by a BBSRC Research Experience Placement (grant number BB/J014540/1). CJRI was supported by a Sir Henry Dale Fellowship jointly funded by the Wellcome Trust and the Royal Society (grant number 101239/Z/13/Z). This research was supported in part by the National Science Foundation (grant number: NSF PHY11-25915) and by the Belgian Science Policy Office (TRIT, contract P7/41, to J-C.D.).This is the final version of the article. It was first available from Wiley via http://dx.doi.org/10.1111/mmi.1329

Early-type Galaxy Halo Dynamics inferred using the PN Spectrograph

A new instrument is providing crucial data with which to probe the structure of dark halos in elliptical galaxies.</p

Elimination of Schistosomiasis Transmission in Zanzibar: Baseline Findings before the Onset of a Randomized Intervention Trial.

Gaining and sustaining control of schistosomiasis and, whenever feasible, achieving local elimination are the year 2020 targets set by the World Health Organization. In Zanzibar, various institutions and stakeholders have joined forces to eliminate urogenital schistosomiasis within 5 years. We report baseline findings before the onset of a randomized intervention trial designed to assess the differential impact of community-based praziquantel administration, snail control, and behavior change interventions. In early 2012, a baseline parasitological survey was conducted in ∼20,000 people from 90 communities in Unguja and Pemba. Risk factors for schistosomiasis were assessed by administering a questionnaire to adults. In selected communities, local knowledge about schistosomiasis transmission and prevention was determined in focus group discussions and in-depths interviews. Intermediate host snails were collected and examined for shedding of cercariae. The baseline Schistosoma haematobium prevalence in school children and adults was 4.3% (range: 0-19.7%) and 2.7% (range: 0-26.5%) in Unguja, and 8.9% (range: 0-31.8%) and 5.5% (range: 0-23.4%) in Pemba, respectively. Heavy infections were detected in 15.1% and 35.6% of the positive school children in Unguja and Pemba, respectively. Males were at higher risk than females (odds ratio (OR): 1.45; 95% confidence interval (CI): 1.03-2.03). Decreasing adult age (OR: 1.04; CI: 1.02-1.06), being born in Pemba (OR: 1.48; CI: 1.02-2.13) or Tanzania (OR: 2.36; CI: 1.16-4.78), and use of freshwater (OR: 2.15; CI: 1.53-3.03) showed higher odds of infection. Community knowledge about schistosomiasis was low. Only few infected Bulinus snails were found. The relatively low S. haematobium prevalence in Zanzibar is a promising starting point for elimination. However, there is a need to improve community knowledge about disease transmission and prevention. Control measures tailored to the local context, placing particular attention to hot-spot areas, high-risk groups, and individuals, will be necessary if elimination is to be achieved

CHROMOSPHERICALLY ACTIVE STARS in the RAVE SURVEY. II. YOUNG DWARFS in the SOLAR NEIGHBORHOOD

© 2017. The American Astronomical Society. All rights reserved. A large sample of over 38,000 chromospherically active candidate solar-like stars and cooler dwarfs from the RAVE survey is addressed in this paper. An improved activity identification with respect to the previous study was introduced to build a catalog of field stars in the solar neighborhood with an excess emission flux in the calcium infrared triplet wavelength region. The central result of this work is the calibration of the age-activity relation for main-sequence dwarfs in a range from a few 10 Myr up to a few Gyr. It enabled an order of magnitude age estimation of the entire active sample. Almost 15,000 stars are shown to be younger than 1 Gyr and ∼2000 younger than 100 Myr. The young age of the most active stars is confirmed by their position off the main sequence in the J - K versus N UV - V diagram showing strong ultraviolet excess, mid-infrared excess in the J - K versus W 1 - W 2 diagram, and very cool temperatures (J - K < 0.7). They overlap with the reference pre-main-sequence RAVE stars often displaying X-ray emission. The activity level increasing with the color reveals their different nature from the solar-like stars and probably represents an underlying dynamo-generating magnetic fields in cool stars. Of the RAVE objects from DR5, 50% are found in the TGAS catalog and supplemented with accurate parallaxes and proper motions by Gaia. This makes the database of a large number of young stars in a combination with RAVE's radial velocities directly useful as a tracer of the very recent large-scale star formation history in the solar neighborhood. The data are available online in the Vizier database

Galactic kinematics from RAVE to Gaia-RVS Data

RAVE data has provided new results on Galactic kinematics like the kinematical decomposition of the Galactic disk. This decomposition permits to identify the different components of the disk and to characterize them in terms of scale height and scale length. With the data provided by Gaia and in particular the RVS, we will have a completly renewed view of the Galaxy. The precision of the RVS will permit to undertake a precise analysis of the kinematics of the Galactic disks. This knowledge will provide significant clues to constrain the scenarios of the Galactic disk formation

Chromospherically Active Stars in the RAVE Survey. II. Young dwarfs in the Solar neighborhood

A large sample of over 38,000 chromospherically active candidate solar-like stars and cooler dwarfs from the RAVE survey is addressed in this paper. An improved activity identification with respect to the previous study was introduced to build a catalog of field stars in the Solar neighborhood with an excess emission flux in the calcium infrared triplet wavelength region. The central result of this work is the calibration of the age--activity relation for the main sequence dwarfs in a range from a few $10 \; \mathrm{Myr}$ up to a few Gyr. It enabled an order of magnitude age estimation of the entire active sample. Almost 15,000 stars are shown to be younger than $1\;\mathrm{Gyr}$ and $\sim$2000 younger than $100\;\mathrm{Myr}$. The young age of the most active stars is confirmed by their position off the main sequence in the $J-K$ versus $N_{UV}-V$ diagram showing strong ultraviolet excess, mid-infrared excess in the $J-K$ versus $W_1-W_2$ diagram and very cool temperatures ($J-K>0.7$). They overlap with the reference pre-main sequence RAVE stars often displaying X-ray emission. The activity level increasing with the color reveals their different nature from the solar-like stars and probably represents an underlying dynamo generating magnetic fields in cool stars. 50\% of the RAVE objects from DR5 are found in the TGAS catalog and supplemented with accurate parallaxes and proper motions by Gaia. This makes the database of a large number of young stars in a combination with RAVE's radial velocities directly useful as a tracer of the very recent large-scale star formation history in the Solar neighborhood. The data are available online in the Vizier database