65 research outputs found

    BCR-associated factors driving chronic lymphocytic leukemia cells proliferation ex vivo

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    International audienceA chronic antigenic stimulation is believed to sustain the leukemogenic development of chronic lymphocytic leukemia (CLL) and most of lymphoproliferative malignancies developed from mature B cells. Reproducing a proliferative stimulation ex vivo is critical to decipher the mechanisms of leukemogenesis in these malignancies. However, functional studies of CLL cells remains limited since current ex vivo B cell receptor (BCR) stimulation protocols are not sufficient to induce the proliferation of these cells, pointing out the need of mandatory BCR co-factors in this process. Here, we investigated benefits of several BCR co-stimulatory molecules (IL-2, IL-4, IL-15, IL-21 and CD40 ligand) in multiple culture conditions. Our results demonstrated that BCR engagement (anti-IgM ligation) concomitant to CD40 ligand, IL-4 and IL-21 stimulation allowed CLL cells proliferation ex vivo. In addition, we established a proliferative advantage for ZAP70 positive CLL cells, associated to an increased phosphorylation of ZAP70/SYK and STAT6. Moreover, the use of a tri-dimensional matrix of methylcellulose and the addition of TLR9 agonists further increased this proliferative response. This ex vivo model of BCR stimulation with T-derived cytokines is a relevant and efficient model for functional studies of CLL as well as lymphoproliferative malignancies. Like in most mature lymphoproliferative malignancies, an antigenic stimulation is believed to drive the leukemo-genic process in chronic lymphocytic leukemia (CLL) 1-3. A restricted use of IGHV genes and the existence of ste-reotypic B cell receptor (BCR) on CLL cells 4-6 provides evidence in favor of antigenic stimulation where different microbial antigens, as well as auto-antigens, have been suspected as actors of this chronic stimulation 7. In addition , a chronic BCR self-activation has been shown in subtypes of CLL cells 8. Moreover, several signaling aberrations have been described downstream of the BCR, notably in aggressive CLL with unmutated IGHV (UM-CLL), in which the expression of ZAP70 reinforces BCR responsiveness 9-12. BCR activation, which is essential for the physiological development of lymphocytes 13 would also be indispensable for the survival and proliferation of CLL cells in vivo 2. Accordingly, withdrawal of this stimulation is believed to be responsible for the rapid spontaneous apoptosis of CLL cells ex vivo 14. The cellular consequences of this BCR activation has been extensively studied an

    Deep-Learning Assessed Muscular Hypodensity Independently Predicts Mortality in DLBCL Patients Younger Than 60 Years.

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    [en] BACKGROUND: Muscle depletion (MD) assessed by computed tomography (CT) has been shown to be a predictive marker in solid tumors, but has not been assessed in non-Hodgkin's lymphomas. Despite software improvements, MD measurement remains highly time-consuming and cannot be used in clinical practice. METHODS: This study reports the development of a Deep-Learning automatic segmentation algorithm (DLASA) to measure MD, and investigate its predictive value in a cohort of 656 diffuse large B cell lymphoma (DLBCL) patients included in the GAINED phase III prospective trial (NCT01659099). RESULTS: After training on a series of 190 patients, the DLASA achieved a Dice coefficient of 0.97 ± 0.03. In the cohort, the median skeletal muscle index was 50.2 cm2/m2 and median muscle attenuation (MA) was 36.1 Hounsfield units (HU). No impact of sarcopenia was found on either progression free survival (PFS) or overall survival (OS). Muscular hypodensity, defined as MA below the tenth percentile according to sex, was associated with a lower OS and PFS, respectively (HR = 2.80 (95% CI 1.58-4.95), p < 0.001, and HR = 2.22 (95% CI 1.43-3.45), p < 0.001). Muscular hypodensity appears to be an independent risk factor for mortality in DLBCL and because of DLASA can be estimated in routine practice

    A French multicentric prospective prognostic cohort with epidemiological, clinical, biological and treatment information to improve knowledge on lymphoma patients: study protocol of the "REal world dAta in LYmphoma and survival in adults" (REALYSA) cohort.

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    BACKGROUND: Age-adjusted lymphoma incidence rates continue to rise in France since the early 80's, although rates have slowed since 2010 and vary across subtypes. Recent improvements in patient survival in major lymphoma subtypes at population level raise new questions about patient outcomes (i.e. quality of life, long-term sequelae). Epidemiological studies have investigated factors related to lymphoma risk, but few have addressed the extent to which socioeconomic status, social institutional context (i.e. healthcare system), social relationships, environmental context (exposures), individual behaviours (lifestyle) or genetic determinants influence lymphoma outcomes, especially in the general population. Moreover, the knowledge of the disease behaviour mainly obtained from clinical trials data is partly biased because of patient selection. METHODS: The REALYSA ("REal world dAta in LYmphoma and Survival in Adults") study is a real-life multicentric cohort set up in French areas covered by population-based cancer registries to study the prognostic value of epidemiological, clinical and biological factors with a prospective 9-year follow-up. We aim to include 6000 patients over 4 to 5 years. Adult patients without lymphoma history and newly diagnosed with one of the following 7 lymphoma subtypes (diffuse large B-cell, follicular, marginal zone, mantle cell, Burkitt, Hodgkin, mature T-cell) are invited to participate during a medical consultation with their hematologist. Exclusion criteria are: having already received anti-lymphoma treatment (except pre-phase) and having a documented HIV infection. Patients are treated according to the standard practice in their center. Clinical data, including treatment received, are extracted from patients' medical records. Patients' risk factors exposures and other epidemiological data are obtained at baseline by filling out a questionnaire during an interview led by a clinical research assistant. Biological samples are collected at baseline and during treatment. A virtual tumor biobank is constituted for baseline tumor samples. Follow-up data, both clinical and epidemiological, are collected every 6 months in the first 3 years and every year thereafter. DISCUSSION: This cohort constitutes an innovative platform for clinical, biological, epidemiological and socio-economic research projects and provides an opportunity to improve knowledge on factors associated to outcome of lymphoma patients in real life. TRIAL REGISTRATION: 2018-A01332-53, ClinicalTrials.gov identifier: NCT03869619

    Methodological developments in proteomic analysis for the discovery and validation of biomarkers in B-cells lymphoid malignancies in adults

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    Le dĂ©veloppement actuel trĂšs rapide des diffĂ©rentes approches « omiques » gĂ©nĂšre un grand nombre de biomarqueurs potentiels, en particulier dans le domaine de la cancĂ©rologie.L’analyse protĂ©omique par spectromĂ©trie de masse a particuliĂšrement bĂ©nĂ©ficiĂ© des progrĂšs technologiques rĂ©cents qui ont permis la mise au point de nouvelles approches quantitatives globales ou ciblĂ©es. NĂ©anmoins, peu de biomarqueurs potentiels finissent par ĂȘtre concrĂštement utilisĂ©s en pratique clinique, nĂ©cessitant l’optimisation des diffĂ©rentes Ă©tapes de leur dĂ©veloppement.Dans la continuitĂ© des travaux ayant abouti Ă  l’identification de biomarqueurs diagnostiques dans les hĂ©mopathies lymphoĂŻdes B, ce travail de thĂšse a permis le dĂ©veloppement d’une mĂ©thode d’analyse protĂ©omique ciblĂ©e pour la vĂ©rification et la validation de nouveaux biomarqueurs potentiels. La possibilitĂ© d’appliquer des stratĂ©gies quantitatives globales Ă  un trĂšs grand nombre d’échantillons a pu ĂȘtre dĂ©montrĂ©e. L’application de ces stratĂ©gies quantitatives globales Ă  du tissu ganglionnaire provenant de lymphomes agressifs a permis d’identifier des biomarqueurs potentiellement associĂ©s Ă  une rĂ©sistance au traitement. Enfin,le mode de prĂ©paration tube-gel, facilitant l’étude d’un grand nombre d’échantillons, a Ă©tĂ© validĂ© pour la rĂ©alisation d’analyses protĂ©omiques diffĂ©rentielles.The current development of new « omics » technologies has led to the discovery of a large number of potential biomarkers, particularly in the field of oncology. Proteomics analysis bymass spectrometry have particularly benefited from these technological advances with the development of new global or targeted quantitative approaches. Nevertheless, only a few numbers of potential biomarkers are finally used in clinical practice, requiring further optimization of the development process. Following the initial identification of biomarkers in the diagnosis of lymphoid malignancies performed previously, this thesis has allowed the development of a targeted proteomics method that can be used for the validation of new potential biomarkers. The ability of analysing a large number of samples with a global quantitative approach has also been demonstrated. The application of these global quantitative strategies on lymph node tissue of aggressive lymphoma has permitted the identification of potential new biomarkers associated with chemorefractoriness. Lastly, a tube-gel protocol facilitating the analysis of a large number of samples has been validated for differential proteomics studies

    Développements méthodologiques en analyse protéomique pour la découverte et la validation de biomarqueurs dans les hémopathies lymphoïdes B de l'adulte

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    The current development of new « omics » technologies has led to the discovery of a large number of potential biomarkers, particularly in the field of oncology. Proteomics analysis bymass spectrometry have particularly benefited from these technological advances with the development of new global or targeted quantitative approaches. Nevertheless, only a few numbers of potential biomarkers are finally used in clinical practice, requiring further optimization of the development process. Following the initial identification of biomarkers in the diagnosis of lymphoid malignancies performed previously, this thesis has allowed the development of a targeted proteomics method that can be used for the validation of new potential biomarkers. The ability of analysing a large number of samples with a global quantitative approach has also been demonstrated. The application of these global quantitative strategies on lymph node tissue of aggressive lymphoma has permitted the identification of potential new biomarkers associated with chemorefractoriness. Lastly, a tube-gel protocol facilitating the analysis of a large number of samples has been validated for differential proteomics studies.Le dĂ©veloppement actuel trĂšs rapide des diffĂ©rentes approches « omiques » gĂ©nĂšre un grand nombre de biomarqueurs potentiels, en particulier dans le domaine de la cancĂ©rologie.L’analyse protĂ©omique par spectromĂ©trie de masse a particuliĂšrement bĂ©nĂ©ficiĂ© des progrĂšs technologiques rĂ©cents qui ont permis la mise au point de nouvelles approches quantitatives globales ou ciblĂ©es. NĂ©anmoins, peu de biomarqueurs potentiels finissent par ĂȘtre concrĂštement utilisĂ©s en pratique clinique, nĂ©cessitant l’optimisation des diffĂ©rentes Ă©tapes de leur dĂ©veloppement.Dans la continuitĂ© des travaux ayant abouti Ă  l’identification de biomarqueurs diagnostiques dans les hĂ©mopathies lymphoĂŻdes B, ce travail de thĂšse a permis le dĂ©veloppement d’une mĂ©thode d’analyse protĂ©omique ciblĂ©e pour la vĂ©rification et la validation de nouveaux biomarqueurs potentiels. La possibilitĂ© d’appliquer des stratĂ©gies quantitatives globales Ă  un trĂšs grand nombre d’échantillons a pu ĂȘtre dĂ©montrĂ©e. L’application de ces stratĂ©gies quantitatives globales Ă  du tissu ganglionnaire provenant de lymphomes agressifs a permis d’identifier des biomarqueurs potentiellement associĂ©s Ă  une rĂ©sistance au traitement. Enfin,le mode de prĂ©paration tube-gel, facilitant l’étude d’un grand nombre d’échantillons, a Ă©tĂ© validĂ© pour la rĂ©alisation d’analyses protĂ©omiques diffĂ©rentielles

    Methodological developments in proteomic analysis for the discovery and validation of biomarkers in B-cells lymphoid malignancies in adults

    No full text
    Le dĂ©veloppement actuel trĂšs rapide des diffĂ©rentes approches « omiques » gĂ©nĂšre un grand nombre de biomarqueurs potentiels, en particulier dans le domaine de la cancĂ©rologie.L’analyse protĂ©omique par spectromĂ©trie de masse a particuliĂšrement bĂ©nĂ©ficiĂ© des progrĂšs technologiques rĂ©cents qui ont permis la mise au point de nouvelles approches quantitatives globales ou ciblĂ©es. NĂ©anmoins, peu de biomarqueurs potentiels finissent par ĂȘtre concrĂštement utilisĂ©s en pratique clinique, nĂ©cessitant l’optimisation des diffĂ©rentes Ă©tapes de leur dĂ©veloppement.Dans la continuitĂ© des travaux ayant abouti Ă  l’identification de biomarqueurs diagnostiques dans les hĂ©mopathies lymphoĂŻdes B, ce travail de thĂšse a permis le dĂ©veloppement d’une mĂ©thode d’analyse protĂ©omique ciblĂ©e pour la vĂ©rification et la validation de nouveaux biomarqueurs potentiels. La possibilitĂ© d’appliquer des stratĂ©gies quantitatives globales Ă  un trĂšs grand nombre d’échantillons a pu ĂȘtre dĂ©montrĂ©e. L’application de ces stratĂ©gies quantitatives globales Ă  du tissu ganglionnaire provenant de lymphomes agressifs a permis d’identifier des biomarqueurs potentiellement associĂ©s Ă  une rĂ©sistance au traitement. Enfin,le mode de prĂ©paration tube-gel, facilitant l’étude d’un grand nombre d’échantillons, a Ă©tĂ© validĂ© pour la rĂ©alisation d’analyses protĂ©omiques diffĂ©rentielles.The current development of new « omics » technologies has led to the discovery of a large number of potential biomarkers, particularly in the field of oncology. Proteomics analysis bymass spectrometry have particularly benefited from these technological advances with the development of new global or targeted quantitative approaches. Nevertheless, only a few numbers of potential biomarkers are finally used in clinical practice, requiring further optimization of the development process. Following the initial identification of biomarkers in the diagnosis of lymphoid malignancies performed previously, this thesis has allowed the development of a targeted proteomics method that can be used for the validation of new potential biomarkers. The ability of analysing a large number of samples with a global quantitative approach has also been demonstrated. The application of these global quantitative strategies on lymph node tissue of aggressive lymphoma has permitted the identification of potential new biomarkers associated with chemorefractoriness. Lastly, a tube-gel protocol facilitating the analysis of a large number of samples has been validated for differential proteomics studies

    Microenvironment Remodeling and Subsequent Clinical Implications in Diffuse Large B-Cell Histologic Variant of Richter Syndrome

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    International audienceIntroduction: Richter Syndrome (RS) is defined as the development of an aggressivelymphoma in the context of Chronic Lymphocytic Leukemia (CLL), with a Diffuse Large B-Cell Lymphoma (DLBCL) histology in 95% cases. RS genomic landscape shares only a few features with de novo DLBCLs and is marked by a wide spectrum of cytogenetic abnormalities. Little is known about RS microenvironment. Therapeutic options and efficacy are limited, leading to a 12 months median overall survival. The new targeted treatments usually effective in CLL fail to obtain long-term remissions in RS. Methods: We reviewed available PubMed literature about RS genomics, PD-1/PD-L1 (Programmed Death 1/Programmed Death Ligand 1) pathway triggering and subsequent new therapeutic options. Results: Data from about 207 patients from four landmark papers were compiled to build an overview of RS genomic lesions and point mutations. A number of these abnormalities may be involved in tumor microenvironment reshaping. T lymphocyte exhaustion through PD-L1 overexpression by tumor cells and subsequent PD-1/PD-L1 pathway triggering is frequently reported in solid cancers. This immune checkpoint inhibitor is also described in B lymphoid malignancies, particularly CLL: PD-1 expression is reported in a subset of prolymphocytes from the CLL lymph node proliferation centers. However, there is only few data about PD-1/PD-L1 pathway in RS. In RS, PD-1 expression is a hallmark of recently described « Regulatory B-cells », which interact with tumor microenvironment by producing inhibiting cytokines such as TGF-band IL-10, impairing T lymphocytes anti-tumoral function. Based upon the discovery of high PD-1 expression on tumoral Blymphocyte from RS, immune checkpoint blockade therapies such as anti-PD-1 antibodies have been tested on small RS cohorts and provided heterogeneous butencouraging results. Conclusion: RS genetic landscape and immune evasion mechanisms are being progressively unraveled. New protocols using targeted treatments such as checkpoint inhibitors as single agents or in combination with immunochemotherapy are currently being evaluated
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