New Insight into the History of Domesticated Apple: Secondary Contribution of the European Wild Apple to the Genome of Cultivated Varieties

The apple is the most common and culturally important fruit crop of temperate areas. The elucidation of its origin and domestication history is therefore of great interest. The wild Central Asian species Malus sieversii has previously been identified as the main contributor to the genome of the cultivated apple (Malus domestica), on the basis of morphological, molecular, and historical evidence. The possible contribution of other wild species present along the Silk Route running from Asia to Western Europe remains a matter of debate, particularly with respect to the contribution of the European wild apple. We used microsatellite markers and an unprecedented large sampling of five Malus species throughout Eurasia (839 accessions from China to Spain) to show that multiple species have contributed to the genetic makeup of domesticated apples. The wild European crabapple M. sylvestris, in particular, was a major secondary contributor. Bidirectional gene flow between the domesticated apple and the European crabapple resulted in the current M. domestica being genetically more closely related to this species than to its Central Asian progenitor, M. sieversii. We found no evidence of a domestication bottleneck or clonal population structure in apples, despite the use of vegetative propagation by grafting. We show that the evolution of domesticated apples occurred over a long time period and involved more than one wild species. Our results support the view that self-incompatibility, a long lifespan, and cultural practices such as selection from open-pollinated seeds have facilitated introgression from wild relatives and the maintenance of genetic variation during domestication. This combination of processes may account for the diversification of several long-lived perennial crops, yielding domestication patterns different from those observed for annual species

Embolism resistance drives the distribution of Amazonian rainforest tree species along hydro-topographic gradients

Species distribution is strongly driven by local and global gradients in water availability but the underlying mechanisms are not clear. Vulnerability to xylem embolism (P-50) is a key trait that indicates how species cope with drought and might explain plant distribution patterns across environmental gradients. Here we address its role on species sorting along a hydro-topographical gradient in a central Amazonian rainforest and examine its variance at the community scale. We measured P-50 for 28 tree species, soil properties and estimated the hydrological niche of each species using an indicator of distance to the water table (HAND). We found a large hydraulic diversity, covering as much as 44% of the global angiosperm variation in P-50. We show that P-50: contributes to species segregation across a hydro-topographic gradient in the Amazon, and thus to species coexistence; is the result of repeated evolutionary adaptation within closely related taxa; is associated with species tolerance to P-poor soils, suggesting the evolution of a stress-tolerance syndrome to nutrients and drought; and is higher for trees in the valleys than uplands. The large observed hydraulic diversity and its association with topography has important implications for modelling and predicting forest and species resilience to climate change221314571465CONSELHO NACIONAL DE DESENVOLVIMENTO CIENTÍFICO E TECNOLÓGICO - CNPQCOORDENAÇÃO DE APERFEIÇOAMENTO DE PESSOAL DE NÍVEL SUPERIOR - CAPES403764/2012-2078-201

Effects of plant diversity on productivity strengthen over time due to trait-dependent shifts in species overyielding.

Plant diversity effects on community productivity often increase over time. Whether the strengthening of diversity effects is caused by temporal shifts in species-level overyielding (i.e., higher species-level productivity in diverse communities compared with monocultures) remains unclear. Here, using data from 65 grassland and forest biodiversity experiments, we show that the temporal strength of diversity effects at the community scale is underpinned by temporal changes in the species that yield. These temporal trends of species-level overyielding are shaped by plant ecological strategies, which can be quantitatively delimited by functional traits. In grasslands, the temporal strengthening of biodiversity effects on community productivity was associated with increasing biomass overyielding of resource-conservative species increasing over time, and with overyielding of species characterized by fast resource acquisition either decreasing or increasing. In forests, temporal trends in species overyielding differ when considering above- versus belowground resource acquisition strategies. Overyielding in stem growth decreased for species with high light capture capacity but increased for those with high soil resource acquisition capacity. Our results imply that a diversity of species with different, and potentially complementary, ecological strategies is beneficial for maintaining community productivity over time in both grassland and forest ecosystems

Enhancing tree performance through species mixing: review of a quarter-century of TreeDivNet experiments reveals research gaps and practical insights

•Purpose of Review: International ambitions for massive afforestation and restoration are high. To make these investments sustainable and resilient under future climate change, science is calling for a shift from planting monocultures to mixed forests. But what is the scientific basis for promoting diverse plantations, and what is the feasibility of their establishment and management? As the largest global network of tree diversity experiments, TreeDivNet is uniquely positioned to answer these pressing questions. Building on 428 peer-reviewed TreeDivNet studies, combined with the results of a questionnaire completed by managers of 32 TreeDivNet sites, we aimed to answer the following questions: (i) How and where have TreeDivNet experiments enabled the relationship between tree diversity and tree performance (including productivity, survival, and pathogen damage) to be studied, and what has been learned? (ii) What are the remaining key knowledge gaps in our understanding of the relationship between tree diversity and tree performance? and (iii) What practical insights can be gained from the TreeDivNet experiments for operational, real-world forest plantations? •Recent Findings: We developed a conceptual framework that identifies the variety of pathways through which target tree performance is related to local neighbourhood diversity and mapped the research efforts for each of those pathways. Experimental research on forest mixtures has focused primarily on direct tree diversity effects on productivity, with generally positive effects of species and functional diversity on productivity. Fewer studies focused on indirect effects mediated via biotic growing conditions (e.g. soil microbes and herbivores) and resource availability and uptake. Most studies examining light uptake found positive effects of species diversity. For pests and diseases, the evidence points mostly towards lower levels of infection for target trees when growing in mixed plantations. Tree diversity effects on the abiotic growing conditions (e.g. microclimate, soil properties) and resource-use efficiency have been less well studied to date. The majority of tree diversity experiments are situated in temperate forests, while (sub)tropical forests, and boreal forests in particular, remain underrepresented. •Summary: TreeDivNet provides evidence in favour of mixing tree species to increase tree productivity while identifying a variety of different processes that drive these diversity effects. The design, scale, age, and management of TreeDivNet experiments reflect their focus on fundamental research questions pertaining to tree diversity-ecosystem function relationships and this scientific focus complicates translation of findings into direct practical management guidelines. Future research could focus on (i) filling the knowledge gaps related to underlying processes of tree diversity effects to better design plantation schemes, (ii) identifying optimal species mixtures, and (iii) developing practical approaches to make experimental mixed plantings more management oriented

Effects of plant diversity on productivity strengthen over time due to trait-dependent shifts in species overyielding

Plant diversity effects on community productivity often increase over time. Whether the strengthening of diversity effects is caused by temporal shifts in species-level overyielding (i.e., higher species-level productivity in diverse communities compared withmonocultures) remains unclear. Here, using data from 65 grassland and forest biodiversity experiments, we show that the temporal strength of diversity effects at the community scale is underpinned by temporal changes in the species that yield. These temporal trends of species-level overyielding are shaped by plant ecological strategies, which can be quantitatively delimited by functional traits. In grasslands, the temporal strengthening of biodiversity effects on community productivity was associated with increasing biomass overyielding of resource-conservative species increasing over time, and with overyielding of species characterized by fast resource acquisition either decreasing or increasing. In forests, temporal trends in species overyielding differ when considering above- versus belowground resource acquisition strategies. Overyielding in stem growth decreased for species with high light capture capacity but increased for those with high soil resource acquisition capacity. Our results imply that a diversity of species with different, and potentially complementary, ecological strategies is beneficial for maintaining community productivity over time in both grassland and forest ecosystems