How understanding shapes reasoning: Experimental argument analysis with methods from psycholinguistics and computational linguistics

Empirical insights into language processing have a philosophical relevance that extends well beyond philosophical questions about language. This chapter will discuss this wider relevance: We will consider how experimental philosophers can examine language processing in order to address questions in several different areas of philosophy. To do so, we will present the emerging research program of experimental argument analysis (EAA) that examines how automatic language processing shapes verbal reasoning – including philosophical arguments. The evidential strand of experimental philosophy uses mainly questionnaire-based methods to assess the evidentiary value of intuitive judgments that are adduced as evidence for philosophical theories and as premises for philosophical arguments. Extending this prominent strand of experimental philosophy, EAA underpins such assessments, extends the scope of the assessments, and expands the range of the empirical methods employed: EAA examines how automatic inferences that are continually made in language comprehension and production shape verbal reasoning, and draws on findings about comprehension biases that affect the contextualisation of such default inferences, in order to explain and expose fallacies. It deploys findings to assess premises and inferences from premises to conclusions, in philosophical arguments. To do so, it adapts methods from psycholinguistics and recruits methods from computational linguistics

Philosophers’ linguistic expertise: A psycholinguistic approach to the expertise objection against experimental philosophy

Philosophers are often credited with particularly well-developed conceptual skills. The ‘expertise objection’ to experimental philosophy builds on this assumption to challenge inferences from findings about laypeople to conclusions about philosophers. We draw on psycholinguistics to develop and assess this objection. We examine whether philosophers are less or differently susceptible than laypersons to cognitive biases that affect how people understand verbal case descriptions and judge the cases described. We examine two possible sources of difference: Philosophers could be better at deploying concepts, and this could make them less susceptible to comprehension biases (‘linguistic expertise objection’). Alternatively, exposure to different patterns of linguistic usage could render philosophers vulnerable to a fundamental comprehension bias, the linguistic salience bias, at different points (‘linguistic usage objection’). Together, these objections mount a novel ‘master argument’ against experimental philosophy. To develop and empirically assess this argument, we employ corpus analysis and distributional semantic analysis and elicit plausibility ratings from academic philosophers and psychology undergraduates. Our findings suggest philosophers are better at deploying concepts than laypeople but are susceptible to the linguistic salience bias to a similar extent and at similar points. We identify methodological consequences for experimental philosophy and for philosophical thought experiments

Gene expression during bacterivorous growth of a widespread marine heterotrophic flagellate

Phagocytosis is a fundamental process in marine ecosystems by which prey organisms are consumed and their biomass incorporated in food webs or remineralized. However, studies searching for the genes underlying this key ecological process in free-living phagocytizing protists are still scarce, in part due to the lack of appropriate ecological models. Our reanalysis of recent molecular datasets revealed that the cultured heterotrophic flagellate Cafeteria burkhardae is widespread in the global oceans, which prompted us to design a transcriptomics study with this species, grown with the cultured flavobacterium Dokdonia sp. We compared the gene expression between exponential and stationary phases, which were complemented with three starvation by dilution phases that appeared as intermediate states. We found distinct expression profiles in each condition and identified 2056 differentially expressed genes between exponential and stationary samples. Upregulated genes at the exponential phase were related to DNA duplication, transcription and translational machinery, protein remodeling, respiration and phagocytosis, whereas upregulated genes in the stationary phase were involved in signal transduction, cell adhesion, and lipid metabolism. We identified a few highly expressed phagocytosis genes, like peptidases and proton pumps, which could be used to target this ecologically relevant process in marine ecosystems

Euro Surveill

In September 2023, a severe outbreak of type B botulism with fifteen cases was linked to consumption of canned sardines at a restaurant in Bordeaux, France, during the Rugby World Cup. The cases were from seven countries. One death was recorded. Outbreak investigation using credit card data, rapid communication between health authorities of the affected countries and broad media communication allowed identification of cases and exposed persons and prevented further severe outcomes

Disease Evolution and Response to Rapamycin in Activated Phosphoinositide 3-Kinase δ Syndrome: The European Society for Immunodeficiencies-Activated Phosphoinositide 3-Kinase δ Syndrome Registry

Activated phosphoinositide 3-kinase (PI3K) δ Syndrome (APDS), caused by autosomal dominant mutations in PIK3CD (APDS1) or PIK3R1 (APDS2), is a heterogeneous primary immunodeficiency. While initial cohort-descriptions summarized the spectrum of clinical and immunological manifestations, questions about long-term disease evolution and response to therapy remain. The prospective European Society for Immunodeficiencies (ESID)-APDS registry aims to characterize the disease course, identify outcome predictors, and evaluate treatment responses. So far, 77 patients have been recruited (51 APDS1, 26 APDS2). Analysis of disease evolution in the first 68 patients pinpoints the early occurrence of recurrent respiratory infections followed by chronic lymphoproliferation, gastrointestinal manifestations, and cytopenias. Although most manifestations occur by age 15, adult-onset and asymptomatic courses were documented. Bronchiectasis was observed in 24/40 APDS1 patients who received a CT-scan compared with 4/15 APDS2 patients. By age 20, half of the patients had received at least one immunosuppressant, but 2–3 lines of immunosuppressive therapy were not unusual before age 10. Response to rapamycin was rated by physician visual analog scale as good in 10, moderate in 9, and poor in 7. Lymphoproliferation showed the best response (8 complete, 11 partial, 6 no remission), while bowel inflammation (3 complete, 3 partial, 9 no remission) and cytopenia (3 complete, 2 partial, 9 no remission) responded less well. Hence, non-lymphoproliferative manifestations should be a key target for novel therapies. This report from the ESID-APDS registry provides comprehensive baseline documentation for a growing cohort that will be followed prospectively to establish prognostic factors and identify patients for treatment studies

Evenness mediates the global relationship between forest productivity and richness

1. Biodiversity is an important component of natural ecosystems, with higher species richness often correlating with an increase in ecosystem productivity. Yet, this relationship varies substantially across environments, typically becoming less pronounced at high levels of species richness. However, species richness alone cannot reflect all important properties of a community, including community evenness, which may mediate the relationship between biodiversity and productivity. If the evenness of a community correlates negatively with richness across forests globally, then a greater number of species may not always increase overall diversity and productivity of the system. Theoretical work and local empirical studies have shown that the effect of evenness on ecosystem functioning may be especially strong at high richness levels, yet the consistency of this remains untested at a global scale. 2. Here, we used a dataset of forests from across the globe, which includes composition, biomass accumulation and net primary productivity, to explore whether productivity correlates with community evenness and richness in a way that evenness appears to buffer the effect of richness. Specifically, we evaluated whether low levels of evenness in speciose communities correlate with the attenuation of the richness–productivity relationship. 3. We found that tree species richness and evenness are negatively correlated across forests globally, with highly speciose forests typically comprising a few dominant and many rare species. Furthermore, we found that the correlation between diversity and productivity changes with evenness: at low richness, uneven communities are more productive, while at high richness, even communities are more productive. 4. Synthesis. Collectively, these results demonstrate that evenness is an integral component of the relationship between biodiversity and productivity, and that the attenuating effect of richness on forest productivity might be partly explained by low evenness in speciose communities. Productivity generally increases with species richness, until reduced evenness limits the overall increases in community diversity. Our research suggests that evenness is a fundamental component of biodiversity–ecosystem function relationships, and is of critical importance for guiding conservation and sustainable ecosystem management decisions

Evenness mediates the global relationship between forest productivity and richness

Biodiversity is an important component of natural ecosystems, with higher species richness often correlating with an increase in ecosystem productivity. Yet, this relationship varies substantially across environments, typically becoming less pronounced at high levels of species richness. However, species richness alone cannot reflect all important properties of a community, including community evenness, which may mediate the relationship between biodiversity and productivity. If the evenness of a community correlates negatively with richness across forests globally, then a greater number of species may not always increase overall diversity and productivity of the system. Theoretical work and local empirical studies have shown that the effect of evenness on ecosystem functioning may be especially strong at high richness levels, yet the consistency of this remains untested at a global scale. 2. Here, we used a dataset of forests from across the globe, which includes composition, biomass accumulation and net primary productivity, to explore whether productivity correlates with community evenness and richness in a way that evenness appears to buffer the effect of richness. Specifically, we evaluated whether low levels of evenness in speciose communities correlate with the attenuation of the richness–productivity relationship. 3. We found that tree species richness and evenness are negatively correlated across forests globally, with highly speciose forests typically comprising a few dominant and many rare species. Furthermore, we found that the correlation between diversity and productivity changes with evenness: at low richness, uneven communities are more productive, while at high richness, even communities are more productive. 4. Synthesis. Collectively, these results demonstrate that evenness is an integral component of the relationship between biodiversity and productivity, and that the attenuating effect of richness on forest productivity might be partly explained by low evenness in speciose communities. Productivity generally increases with species richness, until reduced evenness limits the overall increases in community diversity. Our research suggests that evenness is a fundamental component of biodiversity–ecosystem function relationships, and is of critical importance for guiding conservation and sustainable ecosystem management decisions. © 2023 The Authors. Journal of Ecology published by John Wiley & Sons Ltd on behalf of British Ecological Society

How understanding shapes reasoning:Experimental argument analysis with methods from psycholinguistics and computational linguistics

Empirical insights into language processing have a philosophical relevance that extends well beyond philosophical questions about language. This chapter will discuss this wider relevance: We will consider how experimental philosophers can examine language processing in order to address questions in several different areas of philosophy. To do so, we will present the emerging research program of experimental argument analysis (EAA) that examines how automatic language processing shapes verbal reasoning – including philosophical arguments. The evidential strand of experimental philosophy uses mainly questionnaire-based methods to assess the evidentiary value of intuitive judgments that are adduced as evidence for philosophical theories and as premises for philosophical arguments. Extending this prominent strand of experimental philosophy, EAA underpins such assessments, extends the scope of the assessments, and expands the range of the empirical methods employed: EAA examines how automatic inferences that are continually made in language comprehension and production shape verbal reasoning, and draws on findings about comprehension biases that affect the contextualisation of such default inferences, in order to explain and expose fallacies. It deploys findings to assess premises and inferences from premises to conclusions, in philosophical arguments. To do so, it adapts methods from psycholinguistics and recruits methods from computational linguistics

Intuitions and Illusions:From Explanation and Experiment to Assessment

This chapter presents and develops an interdisciplinary research programme currently emerging from experimental philosophy: The ‘sources project’ seeks to develop psychological explanations of philosophical intuitions that facilitate their epistemological assessment. This chapter develops such an explanation: It explains intuitions at the root of notorious paradoxes about perception (‘arguments from illusion’), reports an experiment supporting this explanation, and suggests how we can advance from this psychological explanation of intuitions to assessments of their evidentiary value. To explain the targeted intuitions, the paper draws on discourse process research from cognitive psychology and psycholinguistics. To test the explanation, it employs an experimental paradigm from psycholinguistics. To derive assessments, it builds on research on metacognitive cues

Recommendations for Successful Implementation of the Use of Vocal Biomarkers for Remote Monitoring of COVID-19 and Long COVID in Clinical Practice and Research

The COVID-19 pandemic accelerated the use of remote patient monitoring in clinical practice or research for safety and emergency reasons, justifying the need for innovative digital health solutions to monitor key parameters or symptoms related to COVID-19 or Long COVID. The use of voice-based technologies, and in particular vocal biomarkers, is a promising approach, voice being a rich, easy-to-collect medium with numerous potential applications for health care, from diagnosis to monitoring. In this viewpoint, we provide an overview of the potential benefits and limitations of using voice to monitor COVID-19, Long COVID, and related symptoms. We then describe an optimal pipeline to bring a vocal biomarker candidate from research to clinical practice and discuss recommendations to achieve such a clinical implementation successfully