When non-extensive entropy becomes extensive

Tsallis' non-extensive entropy $S_q$ enables us to treat both a power and exponential evolutions of underlying microscopic dynamics on equal footing by adjusting the variable entropic index $q$ to proper one $q^*$. We propose an alternative constraint of obtaining the proper entropic index $q^*$ that the non-additive conditional entropy becomes additive if and only if $q=q^*$ in spite of that the associated system cannot be decomposed into statistically independent subsystems. Long-range (time) correlation expressed by $q$-exponential function is discussed based on the nature that $q$-exponential function cannot be factorized into independent factors when $q \ne 1$.Comment: 8 pages, no figure, LaTeX2e, elsart. submit to Physica

Colchicine and amiprophos-methyl (APM) in polyploidy induction in banana plant

The objective was to assess the colchicine and amiprophos-methyl (APM) concentration and exposure period in the chromosome duplication of breed banana plants diploids. Banana stem tips were used from the following genotypes: breed diploids (1304-04 [Malaccensis x Madang (Musa acuminata spp. banksii)] and 8694-15 [0337-02 (Calcutta x Galeo) x SH32-63]). Colchicine was used at concentrations of 0 (control treatment), 1.25, 2.5 and 5.0 mM, while APM was used at 0 (control treatment), 40 and 80 μM, in solution under agitation (20 rpm), for 24 and 48 h periods. With the use of APM, 66.67% tetraploid plants were obtained in the 1304-04 genotype using 40 μM for 24 h and 18.18% in 80 μM for 48 h, while in the 8694-15 genotype using 40 and 80 μM colchicine for 48 h, 27.27 and 21.43% tetraploid plants were observed, respectively. For colchicine, in the 1304-04 genotype, only the 1.25 mM treatment for 48 h presented 25% tetraploid plants and in the 8694-15 genotype, the 5.0 mM concentration for 48 h produced 50% tetraploid plants. APM for 24 h enabled the tetraploid plant of the 1304-04 genotype to be obtained, while colchicine for 48 h resulted in tetraploid plants in the 8694-15 genotype.Key words: Musa acuminata, antimitotic, flow cytometry, tissue culture

Light propagation and Anderson localization in disordered superlattices containing dispersive metamaterials: Effects of correlated disorder

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)We have investigated the effects of disorder correlations on light propagation and Anderson localization in one-dimensional dispersive metamaterials. We consider and compare the cases where disorder is uncorrelated to situations where it is totally correlated and anticorrelated. The photonic gaps of the corresponding periodic structure are not completely destroyed by the presence of disorder, which leads to minima in the localization length. In the vicinities of a gap, the behavior of the localization length depends crucially on the physical origin of the gap (Bragg or non-Bragg gaps). Within a Bragg gap, the localization length increases as the degree of disorder increases, an anomalous behavior that only occurs for the uncorrelated and completely correlated cases. In these cases, minima of the localization length at the positions of Bragg gaps are shifted by increasing disorder, which does not occur for the anticorrelated case, where the positions of the minima remain unaltered. Minima in the localization length corresponding to non-Bragg gaps are not shifted by increasing disorder, albeit the widths of these minima are changed. We have found that the asymptotic behavior for the localization length xi proportional to lambda(6) for disordered metamaterials is not affected by correlations. Finally, we have investigated the role of absorption on the delocalized Brewster modes and argue that it could be mitigated in light of the state-of-the-art of metamaterials research.849Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado do Rio de Janeiro (FAPERJ)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Brazilian Agency FUJBConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP

Differential cell autonomous responses determine the outcome of coxsackievirus infections in murine pancreatic α and β cells

This is the final version of the article. Available from eLife Sciences Publications via the DOI in this record.Type 1 diabetes (T1D) is an autoimmune disease caused by loss of pancreatic β cells via apoptosis while neighboring α cells are preserved. Viral infections by coxsackieviruses (CVB) may contribute to trigger autoimmunity in T1D. Cellular permissiveness to viral infection is modulated by innate antiviral responses, which vary among different cell types. We presently describe that global gene expression is similar in cytokine-treated and virus-infected human islet cells, with up-regulation of gene networks involved in cell autonomous immune responses. Comparison between the responses of rat pancreatic α and β cells to infection by CVB5 and 4 indicate that α cells trigger a more efficient antiviral response than β cells, including higher basal and induced expression of STAT1-regulated genes, and are thus better able to clear viral infections than β cells. These differences may explain why pancreatic β cells, but not α cells, are targeted by an autoimmune response during T1D.Fonds De La Recherche Scientifique – FNRS: FNRS- F 5/4/5.MCF/KP. Project de secherche (PDR) T.0036.13; European Commission (EC): Projects Naimit and BetaBat, in the Framework Programme 7 of the European Community; Federation Wallonie- Bruxelles: the Communaute Franc¸ aise de BelgiqueActions de Recherche Concertees (ARC); Fonds De La Recherche Scientifique – FNRS: FNRS post-doctoral fellowship; Governo Brasil: PDE/CSF Pos-Doutorado no Exterior; Juvenile Diabetes Research Foundation International (JDRF): JDRF Career Development Award; European Commission (EC): European Union’s Seventh Framework Programme [FP7/2007-2013] under grant agreement 261441 PEVNE

Spillover events of rabbit haemorrhagic disease virus 2 (recombinant GI.4P-GI.2) from Lagomorpha to Eurasian badger

Rabbit haemorrhagic disease (RHD) is a major threat to domestic and wild European rabbits. Presently, in Europe, the disease is caused mainly by Rabbit haemorrhagic disease virus 2 (RHDV2/b or Lagovirus europaeus GI.2), the origin of which is still unclear, as no RHDV2 reservoir hosts were identified. After the RHDV2 emergence in 2010, viral RNA was detected in a few rodent species. Furthermore, RHDV2 was found to cause disease in some hare species resembling the disease in rabbits, evidencing the ability of the virus to cross the species barrier. In this study, through molecular, histopathologic, antigenic and morphological evidences, we demonstrate the presence and replication of RHDV2 in Eurasian badgers (Meles meles) found dead in the district of Santarém, Portugal, between March 2017 and January 2020. In two of these seven animals, we further classify the RHDV2 as a Lagovirus europaeus recombinant GI.4P‐GI.2. Our results indicate that Meles meles is susceptible to RHDV2, developing systemic infection, and excreting the virus in the faeces. Given the high viral loads seen in several organs and matrices, we believe that transmission to the wild rabbit is likely. Furthermore, transmission electron microscopy data shows the presence of Calicivirus compatible virions in the nucleus of hepatocytes, which has not been demonstrated before and constitutes a paradigm shift for caliciviruses’s replication cycle

Complete larval development of the hermit crabs Clibanarius aequabilis and Clibanarius erythropus (Decapoda : Anomura : Diogenidae), under laboratory conditions, with a revision of the larval features of genus Clibanarius

The complete larval development (four zoeae and one megalopa) of Clibanarius aequabilis and C. erythropus, reared under laboratory conditions, is described and illustrated. The larval stages of the two northeastern Atlantic Clibanarius species cannot be easily differentiated. Their morphological characters are compared with those of other known Clibanarius larvae. The genus Clibanarius is very homogeneous with respect to larval characters. All Clibanarius zoeae display a broad and blunt rostrum, smooth abdominal segments and an antennal scale without a terminal spine. Beyond the second zoeal stage, the fourth telson process is present as a fused spine, and the uropods are biramous. In the fourth larval stage all species display a mandibular palp. The Clibanarius megalopa presents weakly developed or no ocular scales, symmetrical chelipeds, apically curved corneous dactylus in the second and third pereiopods, and 5-11 setae on the posterior margin of the telson. Apart from the number of zoeal stages, Clibanarius species may be separated, beyond the second zoeal stage, by the telson formula and the morphology of the fourth telson process.info:eu-repo/semantics/publishedVersio

Struggles beneath the waves: Unveiling the incidental capture of sea turtles by artisanal fisheries in Angolan waters

The modernization and intensification of fishing practices have raised the threat to sea turtles, with escalating unintentional captures endangering turtles of all life stages. In this study, we examined the impact of artisanal fishing on sea turtles in two coastal regions of Angola, southern Africa. Between August 2015 - March 2016, through participatory monitoring (n = 8) and interviews with fishers (n= 41), we documented unintentional turtle captures occurring year-round during fishing activities. A total of 405 turtles, 403 olive ridley (Lepidochelys olivacea) and 2 green (Chelonia mydas), were caught in gillnets by fishers engaged in participatory monitoring. Net characteristics, including length and proximity to the shoreline, as reported by the interviewed fishers, correlated with those used by the monitoring group. We estimated approximately 1219 turtles captured by the 41 interviewed fishers over the 8-month study period. Most captures occurred within 100 m from the shoreline. The likelihood of accidental turtle captures increased significantly with proximity to the beach, larger mesh sizes, and greater net lengths and number of hauls. We calculated a survival rate of 41%, and a mortality rate of 59% for captured turtles. Number of turtles caught as bycatch varied throughout the year, with the highest Catch Per Unit Effort (CPUE) reported for Oct. – Dec. Since this period aligns with the nesting season, most captured turtles are likely to be females. The high mortality rate reported in this study emphasizes the immediate threat posed by accidental captures to sea turtle populations, underscoring the critical importance of conservation efforts, particularly in artisanal gillnet fisheries

Nonextensive Entropies derived from Form Invariance of Pseudoadditivity

The form invariance of pseudoadditivity is shown to determine the structure of nonextensive entropies. Nonextensive entropy is defined as the appropriate expectation value of nonextensive information content, similar to the definition of Shannon entropy. Information content in a nonextensive system is obtained uniquely from generalized axioms by replacing the usual additivity with pseudoadditivity. The satisfaction of the form invariance of the pseudoadditivity of nonextensive entropy and its information content is found to require the normalization of nonextensive entropies. The proposed principle requires the same normalization as that derived in [A.K. Rajagopal and S. Abe, Phys. Rev. Lett. {\bf 83}, 1711 (1999)], but is simpler and establishes a basis for the systematic definition of various entropies in nonextensive systems.Comment: 16 pages, accepted for publication in Physical Review

The BINGO project: VII. Cosmological forecasts from 21 cm intensity mapping

Context. The 21 cm line of neutral hydrogen (HI) opens a new avenue in our exploration of the structure and evolution of the Universe. It provides complementary data to the current large-scale structure (LSS) observations with different systematics, and thus it will be used to improve our understanding of the Icold dark matter (ICDM) model. This will ultimately constrain our cosmological models, attack unresolved tensions, and test our cosmological paradigm. Among several radio cosmological surveys designed to measure this line, BINGO is a single-dish telescope mainly designed to detect baryon acoustic oscillations (BAOs) at low redshifts (0.127 < z < 0.449). Aims. Our goal is to assess the fiducial BINGO setup and its capabilities of constraining the cosmological parameters, and to analyze the effect of different instrument configurations. Methods. We used the 21 cm angular power spectra to extract cosmological information about the HI signal and the Fisher matrix formalism to study BINGO's projected constraining power. Results. We used the Phase 1 fiducial configuration of the BINGO telescope to perform our cosmological forecasts. In addition, we investigated the impact of several instrumental setups, taking into account some instrumental systematics, and different cosmological models. Combining BINGO with Planck temperature and polarization data, the projected constraint improves from a 13% and 25% precision measurement at the 68% confidence level with Planck only to 1% and 3% for the Hubble constant and the dark energy (DE) equation of state (EoS), respectively, within the wCDM model. Assuming a Chevallier- Polarski- Linder (CPL) parameterization, the EoS parameters have standard deviations given by w0 = 0.30 and wa = 1.2, which are improvements on the order of 30% with respect to Planck alone. We also compared BINGO's fiducial forecast with future SKA measurements and found that, although it will not provide competitive constraints on the DE EoS, significant information about HI distribution can be acquired. We can access information about the HI density and bias, obtaining 8.5% and 6% precision, respectively, assuming they vary with redshift at three independent bins. BINGO can also help constrain alternative models, such as interacting dark energy and modified gravity models, improving the cosmological constraints significantly. Conclusions. The fiducial BINGO configuration will be able to extract significant cosmological information from the HI distribution and provide constraints competitive with current and future cosmological surveys. It will also help in understanding the HI physics and systematic effects

The BINGO Project: III. Optical design and optimization of the focal plane

Context. The Baryon Acoustic Oscillations from Integrated Neutral Gas Observations (BINGO) telescope was designed to measure the fluctuations of the 21 cm radiation arising from the hyperfine transition of neutral hydrogen. It is also aimed at measuring the baryon acoustic oscillations (BAO) from such fluctuations, thereby serving as a pathfinder to future, deeper intensity mapping surveys. The requirements for the Phase 1 of the projects consider a large reflector system (two 40 m-class dishes in a crossed-Dragone configuration) illuminating a focal plane with 28 horns to measure the sky, with two circular polarizations in a drift scan mode to produce measurements of the radiation in intensity (I) as well as the circular (V) polarization. Aims. In this paper, we present the optical design for the instrument. We describe the optical arrangement of the horns in the focal plane to produce a homogeneous and well-sampled map after the end of Phase 1, as well as the intensity and polarization properties of the beams. Our analysis provides an optimal model for the location of the horns in the focal plane, producing a homogeneous and Nyquist-sampled map after the nominal survey time. Methods. We used the GRASP package to model the focal plane arrangement and performed several optimization tasks to arrive at the current configuration, including an estimation of the sidelobes corresponding to the diffraction patterns of the two mirrors. The final model for the focal plane was defined through a combination of neural network and other direct optimization methods. Results. We arrived at an optimal configuration for the optical system that includes the focal plane positioning and the beam behavior of the instrument. We present an estimate of the expected sidelobes both for intensity and polarization, as well as the effect of band averaging on the final sidelobes, as well as an estimation of the cross-polarization leakage for the final configuration. Conclusions. We conclude that the chosen optical design meets the requirements for the project in terms of polarization purity and area coverage as well as a homogeneity of coverage so that BINGO can perform a successful BAO experiment. We further conclude that the requirements on the placement and rms error on the mirrors are also achievable so that a successful experiment can be conducted