Opportunities and challenges in open distance postgraduate student training in chemistry: Unisa’s experience

The Department of Chemistry at the University of South Africa (UNISA) has a proven track record and culture of research and postgraduate student training dating back to the correspondence era. The practice of offering postgraduate programs in laboratory-based disciplines within the Open Distance Learning (ODL) context as practiced in UNISA is discussed in detail. The authors use their experience to shed light on the models that work well for  laboratory-based postgraduate student training within the ODL framework. [AJCE 4(3), Special Issue, May 2014

Integrated water resources management as a new approach to water security

Access to safe water is a worldwide problem facing three quarters of a billion people every day. The problem of access to water is not primarily due to an overall scarcity of water, but rather the unequal geographical and seasonal distribution of the water resources. The key issue at stake here is, how to make water available. The new approach presented by international institutions for improving water access is Integrated Water Resource Management. This chapter questions this new approach and highlights the depoliticizing implications

Water Balance Model: Implications for Groundwater Recharge Estimation in Data Scarce Arid Catchment, Northern Ethiopia

The paper presents results related to water balance model of the Gumselassa catchment (28.1 km2), Tigray, Northern Ethiopia. The catchment includes a small dam called Gumselassa dam having an effective watershed area of 22.14 km2 with reservoir capacity of 1.92 x 106 m3 and command area of about 1sq. km. The hydrology of the area was characterized on the basis of land use, soil, slope and climatic parameters. Different methods were employed in this study: rainfall coefficient method was used to determine monthly distribution of rainfall; Penman method to calculate evaporation from the reservoir; Thornthwaite method and Thornthwaite water balance model to determine potential and actual evapotranspiration; runoff coefficient method to estimate runoff; and, the water balance model was used to quantify the recharge. The catchment is characterized by one rainy season (three months) and two dry seasons (nine months) during the year. The mean annual rainfall of the catchment is 485.89 mm. The total annual water loss by evaporation from the reservoir is 1263.27 mm. The mean annual actual evapotranspiration of the effective watershed area one and two is 318.57 mm and 310.27 mm, respectively. The mean annual actual evapotranspiration of the water contributing area 1 and 2 to the command area is 337.06 mm and 355.29 mm, respectively. The mean annual actual evapotranspiration of the command area is 319.3 mm. The mean annual runoff generated from the effective watershed area one and two is 1.167 and 0.44 million cubic meters, respectively. The mean annual runoff generated from the water contributing area 1 and 2 to the command area is 0.048 and 0.349 million cubic meters, respectively. The mean annual runoff generated from the command area is 0.0875 million cubic meters. The total amount of water which is actually available to recharge the groundwater within the catchment is 4.065 million cubic meters, and any application of water for irrigation from the reservoir should take into account this readily available water

High seroprevalence of anti-SARS-CoV-2 antibodies among Ethiopian healthcare workers

BACKGROUND: COVID-19 pandemic has a devastating impact on the economies and health care system of sub-Saharan Africa. Healthcare workers (HWs), the main actors of the health system, are at higher risk because of their occupation. Serology-based estimates of SARS-CoV-2 infection among HWs represent a measure of HWs' exposure to the virus and could be used as a guide to the prevalence of SARS-CoV-2 in the community and valuable in combating COVID-19. This information is currently lacking in Ethiopia and other African countries. This study aimed to develop an in-house antibody testing assay, assess the prevalence of SARS-CoV-2 antibodies among Ethiopian high-risk frontline HWs. METHODS: We developed and validated an in-house Enzyme-Linked Immunosorbent Assay (ELISA) for specific detection of anti-SARS-CoV-2 receptor binding domain immunoglobin G (IgG) antibodies. We then used this assay to assess the seroprevalence among HWs in five public hospitals located in different geographic regions of Ethiopia. From consenting HWs, blood samples were collected between December 2020 and February 2021, the period between the two peaks of COVID-19 in Ethiopia. Socio-demographic and clinical data were collected using questionnaire-based interviews. Descriptive statistics and bivariate and multivariate logistic regression were used to determine the overall and post-stratified seroprevalence and the association between seropositivity and potential risk factors. RESULTS: Our successfully developed in-house assay sensitivity was 100% in serum samples collected 2- weeks after the first onset of symptoms whereas its specificity in pre-COVID-19 pandemic sera was 97.7%. Using this assay, we analyzed a total of 1997 sera collected from HWs. Of 1997 HWs who provided a blood sample, and demographic and clinical data, 51.7% were females, 74.0% had no symptoms compatible with COVID-19, and 29.0% had a history of contact with suspected or confirmed patients with SARS-CoV-2 infection. The overall seroprevalence was 39.6%. The lowest (24.5%) and the highest (48.0%) seroprevalence rates were found in Hiwot Fana Specialized Hospital in Harar and ALERT Hospital in Addis Ababa, respectively. Of the 821 seropositive HWs, 224(27.3%) of them had a history of symptoms consistent with COVID-19 while 436 (> 53%) of them had no contact with COVID-19 cases as well as no history of COVID-19 like symptoms. A history of close contact with suspected/confirmed COVID-19 cases is associated with seropositivity (Adjusted Odds Ratio (AOR) = 1.4, 95% CI 1.1-1.8; p = 0.015). CONCLUSION: High SARS-CoV-2 seroprevalence levels were observed in the five Ethiopian hospitals. These findings highlight the significant burden of asymptomatic infection in Ethiopia and may reflect the scale of transmission in the general population

Role of Sphingomyelin Synthase in Controlling the Antimicrobial Activity of Neutrophils against Cryptococcus neoformans

The key host cellular pathway(s) necessary to control the infection caused by inhalation of the environmental fungal pathogen Cryptococcus neoformans are still largely unknown. Here we have identified that the sphingolipid pathway in neutrophils is required for them to exert their killing activity on the fungus. In particular, using both pharmacological and genetic approaches, we show that inhibition of sphingomyelin synthase (SMS) activity profoundly impairs the killing ability of neutrophils by preventing the extracellular release of an antifungal factor(s). We next found that inhibition of protein kinase D (PKD), which controls vesicular sorting and secretion and is regulated by diacylglycerol (DAG) produced by SMS, totally blocks the extracellular killing activity of neutrophils against C. neoformans. The expression of SMS genes, SMS activity and the levels of the lipids regulated by SMS (namely sphingomyelin (SM) and DAG) are up-regulated during neutrophil differentiation. Finally, tissue imaging of lungs infected with C. neoformans using matrix-assisted laser desorption-ionization mass spectrometry (MALDI-MS), revealed that specific SM species are associated with neutrophil infiltration at the site of the infection. This study establishes a key role for SMS in the regulation of the killing activity of neutrophils against C. neoformans through a DAG-PKD dependent mechanism, and provides, for the first time, new insights into the protective role of host sphingolipids against a fungal infection

Chlamydia trachomatis Co-opts GBF1 and CERT to Acquire Host Sphingomyelin for Distinct Roles during Intracellular Development

The obligate intracellular pathogen Chlamydia trachomatis replicates within a membrane-bound inclusion that acquires host sphingomyelin (SM), a process that is essential for replication as well as inclusion biogenesis. Previous studies demonstrate that SM is acquired by a Brefeldin A (BFA)-sensitive vesicular trafficking pathway, although paradoxically, this pathway is dispensable for bacterial replication. This finding suggests that other lipid transport mechanisms are involved in the acquisition of host SM. In this work, we interrogated the role of specific components of BFA-sensitive and BFA-insensitive lipid trafficking pathways to define their contribution in SM acquisition during infection. We found that C. trachomatis hijacks components of both vesicular and non-vesicular lipid trafficking pathways for SM acquisition but that the SM obtained from these separate pathways is being utilized by the pathogen in different ways. We show that C. trachomatis selectively co-opts only one of the three known BFA targets, GBF1, a regulator of Arf1-dependent vesicular trafficking within the early secretory pathway for vesicle-mediated SM acquisition. The Arf1/GBF1-dependent pathway of SM acquisition is essential for inclusion membrane growth and stability but is not required for bacterial replication. In contrast, we show that C. trachomatis co-opts CERT, a lipid transfer protein that is a key component in non-vesicular ER to trans-Golgi trafficking of ceramide (the precursor for SM), for C. trachomatis replication. We demonstrate that C. trachomatis recruits CERT, its ER binding partner, VAP-A, and SM synthases, SMS1 and SMS2, to the inclusion and propose that these proteins establish an on-site SM biosynthetic factory at or near the inclusion. We hypothesize that SM acquired by CERT-dependent transport of ceramide and subsequent conversion to SM is necessary for C. trachomatis replication whereas SM acquired by the GBF1-dependent pathway is essential for inclusion growth and stability. Our results reveal a novel mechanism by which an intracellular pathogen redirects SM biosynthesis to its replicative niche

Reference soil groups map of Ethiopia based on legacy data and machine learning-technique: EthioSoilGrids 1.0

Up-to-date digital soil resource information and its comprehensive understanding are crucial to supporting crop production and sustainable agricultural development. Generating such information through conventional approaches consumes time and resources, and is difficult for developing countries. In Ethiopia, the soil resource map that was in use is qualitative, dated (since 1984), and small scaled (1 : 2 M), which limit its practical applicability. Yet, a large legacy soil profile dataset accumulated over time and the emerging machine-learning modeling approaches can help in generating a high-quality quantitative digital soil map that can provide better soil information. Thus, a group of researchers formed a Coalition of the Willing for soil and agronomy data-sharing and collated about 20 000 soil profile data and stored them in a central database. The data were cleaned and harmonized using the latest soil profile data template and 14 681 profile data were prepared for modeling. Random forest was used to develop a continuous quantitative digital map of 18 World Reference Base (WRB) soil groups at 250 m resolution by integrating environmental covariates representing major soil-forming factors. The map was validated by experts through a rigorous process involving senior soil specialists or pedologists checking the map based on purposely selected district-level geographic windows across Ethiopia. The map is expected to be of tremendous value for soil management and other land-based development planning, given its improved spatial resolution and quantitative digital representation.</p

Reassessing the effect of colour on attitude and behavioural intentions in promotional activities: The moderating role of mood and involvement

The present research examines the effect of background colour on attitude and behavioural intentions in various promotional activities taking into consideration the moderating role of mood and involvement. Three experiments reflecting different promotional activities (window display, consumer trade show, guerrilla marketing) were conducted for this purpose. Overall, findings indicate that cool background colours, in contrast to warm colours, induce more positive attitudes and behavioural intentions mainly in positive mood, and low involvement conditions. Implications are also discussed