907 research outputs found
The ATPase activity of MLH1 is required to orchestrate DNA double-strand breaks and end processing during class switch recombination.
PublishedJournal ArticleResearch Support, N.I.H., ExtramuralResearch Support, Non-U.S. Gov'tAntibody diversification through somatic hypermutation (SHM) and class switch recombination (CSR) are similarly initiated in B cells with the generation of U:G mismatches by activation-induced cytidine deaminase but differ in their subsequent mutagenic consequences. Although SHM relies on the generation of nondeleterious point mutations, CSR depends on the production of DNA double-strand breaks (DSBs) and their adequate recombination through nonhomologous end joining (NHEJ). MLH1, an ATPase member of the mismatch repair (MMR) machinery, is emerging as a likely regulator of whether a U:G mismatch progresses toward mutation or DSB formation. We conducted experiments on cancer modeled ATPase-deficient MLH1G67R knockin mice to determine the function that the ATPase domain of MLH1 mediates in SHM and CSR. Mlh1(GR/GR) mice displayed a significant decrease in CSR, mainly attributed to a reduction in the generation of DSBs and diminished accumulation of 53BP1 at the immunoglobulin switch regions. However, SHM was normal in these mice, which distinguishes MLH1 from upstream members of the MMR pathway and suggests a very specific role of its ATPase-dependent functions during CSR. In addition, we show that the residual switching events still taking place in Mlh1(GR/GR) mice display unique features, suggesting a role for the ATPase activity of MLH1 beyond the activation of the endonuclease functions of its MMR partner PMS2. A preference for switch junctions with longer microhomologies in Mlh1(GR/GR) mice suggests that through its ATPase activity, MLH1 also has an impact in DNA end processing, favoring canonical NHEJ downstream of the DSB. Collectively, our study shows that the ATPase domain of MLH1 is important to transmit the CSR signaling cascade both upstream and downstream of the generation of DSBs.Spanish Ministry of Education and ScienceNIHNational Women’s Division of the Albert Einstein College of Medicin
Age-Associated Disruption of Molecular Clock Expression in Skeletal Muscle of the Spontaneously Hypertensive Rat
It is well known that spontaneously hypertensive rats (SHR) develop muscle pathologies with hypertension and heart failure, though the mechanism remains poorly understood. Woon et al. (2007) linked the circadian clock gene Bmal1 to hypertension and metabolic dysfunction in the SHR. Building on these findings, we compared the expression pattern of several core-clock genes in the gastrocnemius muscle of aged SHR (80 weeks; overt heart failure) compared to aged-matched control WKY strain. Heart failure was associated with marked effects on the expression of Bmal1, Clock and Rora in addition to several non-circadian genes important in regulating skeletal muscle phenotype including Mck, Ttn and Mef2c. We next performed circadian time-course collections at a young age (8 weeks; pre-hypertensive) and adult age (22 weeks; hypertensive) to determine if clock gene expression was disrupted in gastrocnemius, heart and liver tissues prior to or after the rats became hypertensive. We found that hypertensive/hypertrophic SHR showed a dampening of peak Bmal1 and Rev-erb expression in the liver, and the clock-controlled gene Pgc1α in the gastrocnemius. In addition, the core-clock gene Clock and the muscle-specific, clock-controlled gene Myod1, no longer maintained a circadian pattern of expression in gastrocnemius from the hypertensive SHR. These findings provide a framework to suggest a mechanism whereby chronic heart failure leads to skeletal muscle pathologies; prolonged dysregulation of the molecular clock in skeletal muscle results in altered Clock, Pgc1α and Myod1 expression which in turn leads to the mis-regulation of target genes important for mechanical and metabolic function of skeletal muscle
Slowing down atomic diffusion in subdwarf B stars: mass loss or turbulence?
Subdwarf B stars show chemical peculiarities that cannot be explained by
diffusion theory alone. Both mass loss and turbulence have been invoked to slow
down atomic diffusion in order to match observed abundances. The fact that some
sdB stars show pulsations gives upper limits on the amount of mass loss and
turbulent mixing allowed. Consequently, non-adiabatic asteroseismology has the
potential to decide which process is responsible for the abundance anomalies.
We compute for the first time seismic properties of sdB models with atomic
diffusion included consistently during the stellar evolution. The diffusion
equations with radiative forces are solved for H, He, C, N, O, Ne, Mg, Fe and
Ni. We examine the effects of various mass-loss rates and mixed surface masses
on the abundances and mode stability. It is shown that the mass-loss rates
needed to simulate the observed He abundances (10^{-14}<=Mdot
[Msun/yr]<=10^{-13}) are not consistent with observed pulsations. We find that
for pulsations to be driven the rates should be Mdot<=10^{-15} Msun/yr. On the
other hand, weak turbulent mixing of the outer 10^{-6} Msun can explain the He
abundance anomalies while still allowing pulsations to be driven. The origin of
the turbulence remains unknown but the presence of pulsations gives tight
constraints on the underlying turbulence model.Comment: 12 pages, 8 figures, 1 table, accepted for publication in MNRA
Fortnightly Fluctuations in the O-C Diagram of CS 1246
Dominated by a single, large-amplitude pulsation mode, the rapidly-pulsating
hot subdwarf B star CS 1246 is a prime candidate for a long-term O-C diagram
study. We collected nearly 400 hours of photometry with the PROMPT telescopes
over a time span of 14 months to begin looking for secular variations in the
pulse timings. Interestingly, the O-C diagram is dominated by a strong
sinusoidal pattern with a period of 14.1 days and an amplitude of 10.7
light-seconds. Underneath this sine wave is a secular trend implying a decrease
in the 371.7-s pulsational period of Pdot = -1.9 x 10^-11, which we attribute
to the evolution of the star through the H-R diagram. The sinusoidal variation
could be produced by the presence of a low-mass companion, with m sin i ~ 0.12
Msun, orbiting the subdwarf B star at a distance of 20 Rsun. An analysis of the
combined light curve reveals the presence of a low-amplitude first harmonic to
the main pulsation mode.Comment: Accepted for publication in MNRAS. 11 pages, 8 figures, 5 table
Spin-dependent twist-4 matrix elements from the instanton vacuum: Flavor-singlet and nonsinglet
We estimate the twist-4 spin-1 nucleon matrix element f_2 in an
instanton-based description of the QCD vacuum. In addition to the
flavor-nonsinglet we compute also the flavor-singlet matrix element, which
appears in next-to-leading order of the (1/N_c)-expansion. The corresponding
twist-3 spin-2 matrix elements d_2 are suppressed in the packing fraction of
the instanton medium, (\bar \rho)/(\bar R) << 1. We use our results to estimate
the leading (1/Q^2) power corrections to the first moment of the proton and
neutron spin structure functions G_1, as well as the intrinsic charm
contribution to the nucleon spin.Comment: 17 pages, 4 eps figures include
The role of non-invasive devices for the telemonitoring of heart failure patients
Heart failure (HF) patients represent one of the most prevalent as well as one of the most fragile population encountered in the cardiology and internal medicine departments nowadays. Estimated to account for around 26 million people worldwide, diagnosed patients present a poor prognosis and quality of life with a clinical history accompanied by repeated hospital admissions caused by an exacerbation of their chronic condition. The frequent hospitalizations and the extended hospital stays mean an extremely high economic burden for healthcare institutions. Meanwhile, the number of chronically diseased and elderly patients is continuously rising, and a lack of specialized physicians is evident. To cope with this health emergency, more efficient strategies for patient management, more accurate diagnostic tools, and more efficient preventive plans are needed. In recent years, telemonitoring has been introduced as the potential answer to solve such needs. Different methodologies and devices have been progressively investigated for effective home monitoring of cardiologic patients. Invasive hemodynamic devices, such as CardioMEMSâ„¢, have been demonstrated to be reducing hospitalizations and mortality, but their use is however restricted to limited cases. The role of external non-invasive devices for remote patient monitoring, instead, is yet to be clarified. In this review, we summarized the most relevant studies and devices that, by utilizing non-invasive telemonitoring, demonstrated whether beneficial effects in the management of HF patients were effective
Impact of propofol on mid-latency auditory-evoked potentials in childrenâ€
Background Propofol is increasingly used in paediatric anaesthesia, but can be challenging to titrate accurately in this group. Mid-latency auditory-evoked potentials (MLAEPs) can be used to help titrate propofol. However, the effects of propofol on MLAEP in children are unclear. Therefore, we investigated the relationship between propofol and MLAEP in children undergoing anaesthesia. Methods Fourteen healthy children aged 4-16 yr received anaesthesia for elective surgery. Before surgery, propofol was administered in three concentrations (3, 6, 9 µg ml−1) through a target-controlled infusion pump using Kataria and colleagues' model. MLAEPs were recorded 5 min after having reached each target propofol concentration at each respective concentration. Additionally, venous propofol blood concentrations were assayed at each measuring time point. Results Propofol increased all four MLAEP peak latencies (peaks Na, Pa, Nb, P1) in a dose-dependent manner. In addition, the differences in amplitudes were significantly smaller with increasing propofol target concentrations. The measured propofol plasma concentrations correlated positively with the latencies of the peaks Na, Pa, and Nb. Conclusions Propofol affects MLAEP latencies and amplitudes in children in a dose-dependent manner. MLAEP measurement might therefore be a useful tool for monitoring depth of propofol anaesthesia in childre
The Subluminous and Peculiar Type Ia Supernova PTF09dav
PTF09dav is a peculiar subluminous type Ia supernova (SN) discovered by the
Palomar Transient Factory (PTF). Spectroscopically, it appears superficially
similar to the class of subluminous SN1991bg-like SNe, but it has several
unusual features which make it stand out from this population. Its peak
luminosity is fainter than any previously discovered SN1991bg-like SN Ia (M_B
-15.5), but without the unusually red optical colors expected if the faint
luminosity were due to extinction. The photospheric optical spectra have very
unusual strong lines of Sc II and Mg I, with possible Sr II, together with
stronger than average Ti II and low velocities of ~6000 km/s. The host galaxy
of PTF09dav is ambiguous. The SN lies either on the extreme outskirts (~41kpc)
of a spiral galaxy, or in an very faint (M_R>-12.8) dwarf galaxy, unlike other
1991bg-like SNe which are invariably associated with massive, old stellar
populations. PTF09dav is also an outlier on the light-curve-width--luminosity
and color--luminosity relations derived for other sub-luminous SNe Ia. The
inferred 56Ni mass is small (0.019+/-0.003Msun), as is the estimated ejecta
mass of 0.36Msun. Taken together, these properties make PTF09dav a remarkable
event. We discuss various physical models that could explain PTF09dav. Helium
shell detonation or deflagration on the surface of a CO white-dwarf can explain
some of the features of PTF09dav, including the presence of Sc and the low
photospheric velocities, but the observed Si and Mg are not predicted to be
very abundant in these models. We conclude that no single model is currently
capable of explaining all of the observed signatures of PTF09dav.Comment: Accepted for publication in Ap
MutLα heterodimers modify the molecular phenotype of Friedreich ataxia
This article has been made available through the Brunel Open Access Publishing Fund.Background: Friedreich ataxia (FRDA), the most common autosomal recessive ataxia disorder, is caused by a dynamic GAA repeat expansion mutation within intron 1 of FXN gene, resulting in down-regulation of frataxin expression. Studies of cell and mouse models have revealed a role for the mismatch repair (MMR) MutS-heterodimer complexes and the PMS2 component of the MutLα complex in the dynamics of intergenerational and somatic GAA repeat expansions: MSH2, MSH3 and MSH6 promote GAA repeat expansions, while PMS2 inhibits GAA repeat expansions. Methodology/Principal Findings: To determine the potential role of the other component of the MutLα complex, MLH1, in GAA repeat instability in FRDA, we have analyzed intergenerational and somatic GAA repeat expansions from FXN transgenic mice that have been crossed with Mlh1 deficient mice. We find that loss of Mlh1 activity reduces both intergenerational and somatic GAA repeat expansions. However, we also find that loss of either Mlh1 or Pms2 reduces FXN transcription, suggesting different mechanisms of action for Mlh1 and Pms2 on GAA repeat expansion dynamics and regulation of FXN transcription. Conclusions/Significance: Both MutLα components, PMS2 and MLH1, have now been shown to modify the molecular phenotype of FRDA. We propose that upregulation of MLH1 or PMS2 could be potential FRDA therapeutic approaches to increase FXN transcription. © 2014 Ezzatizadeh et al.This article has been made available through the Brunel Open Access Publishing Fund
Nitric oxide metabolites: associations with cardiovascular biomarkers and clinical parameters in patients with HFpEF
AIMS: Heart failure with preserved ejection fraction (HFpEF) is one of the most rapidly growing cardiovascular health burden worldwide, but there is still a lack of understanding about the HFpEF pathophysiology. The nitric oxide (NO) signalling pathway has been identified as a potential key element. The aim of our study was to investigate markers of NO metabolism [ l-arginine ( l-Arg), homoarginine (hArg), and asymmetric and symmetric dimethylarginine (ADMA and SDMA)], additional biomarkers [N-terminal pro-B-type natriuretic peptide (NT-proBNP), endothelin-1 (ET-1), mid-regional pro-adrenomedullin (MR-proADM), copeptin, and high-sensitivity C-reactive protein (hsCRP)], and the endothelial function in an integrated approach focusing on associations with clinical characteristics in patients with HFpEF. METHODS AND RESULTS: Seventy-three patients, prospectively enrolled in the 'German HFpEF Registry', were analysed. Inclusion criteria were left ventricular ejection fraction (LVEF) ≥ 50%; New York Heart Association functional class ≥ II; elevated levels of NT-proBNP > 125 pg/mL; and at least one additional criterion for structural heart disease or diastolic dysfunction. All patients underwent transthoracic echocardiography, cardiopulmonary exercise testing, and pulse amplitude tonometry (EndoPAT™). Patients were categorized in two groups based on their retrospectively calculated HFA-PEFF score. Serum concentrations of l-Arg, hArg, ADMA, SDMA, NT-proBNP, ET-1, MR-proADM, copeptin, and hsCRP were determined. Patients had a median age of 74 years, 47% were female, and median LVEF was 57%. Fifty-two patients (71%) had an HFA-PEFF score ≥ 5 (definitive HFpEF), and 21 patients (29%) a score of 3 to 4 (risk for HFpEF). Overall biomarker concentrations were 126 ± 32 μmol/L for l-Arg, 1.67 ± 0.55 μmol/L for hArg, 0.74 (0.60;0.85) μmol/L for SDMA, and 0.61 ± 0.10 μmol/L for ADMA. The median reactive hyperaemia index (RHI) was 1.55 (1.38;1.87). SDMA correlated with NT-proBNP (r = 0.291; P = 0.013), ET-1 (r = 0.233; P = 0.047), and copeptin (r = 0.381; P = 0.001). ADMA correlated with ET-1 (r = 0.250; P = 0.033) and hsCRP (r = 0.303; P = 0.009). SDMA was associated with the left atrial volume index (β = 0.332; P = 0.004), also after adjustment for age, sex, and comorbidities. Biomarkers were non-associated with the RHI. A principal component analysis revealed two contrary clusters of biomarkers. CONCLUSIONS: Our findings suggest an impaired NO metabolism as one possible key pathogenic determinant in at least a subgroup of patients with HFpEF. We argue for further evaluation of NO-based therapies. Upcoming studies should clarify whether subgroups of HFpEF patients can take more benefit from therapies that are targeting NO metabolism and pathway
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