Continuous measurement of nitrate concentration in a highly event-responsive agricultural catchment in south-west of France: is the gain of information useful?

A nitrate sensor has been set up to measure every 10 min the nitrate signal in a stream draining a small agricultural catchment dominated by fertilized crops during a 2-year study period (2006–2008) in the south-west of France. An in situ sampling protocol using automatic sampler to monitor flood events have been used to assume a point-to-point calibration of the sensor values. The nitrate concentration exhibits nonsystematic concentration and dilution effects during flood events. We demonstrate that the calibrated nitrate sensor signal gathered from the outlet is considered to be a continuous signal using the Nyquist–Shannon sampling theorem. The objectives of this study are to quantify the errors generated by a typical infrequent sampling protocol and to design appropriate sampling strategy according to the sampling objectives. Nitrate concentration signal and flow data are numerically sampled to simulate common sampling frequencies. The total fluxes calculated from the simulated samples are compared with the reference value computed on the continuous signal. Uncertainties are increasing as sampling intervals increase; the method that is not using continuous discharge to compute nitrate fluxes bring larger uncertainty. The dispersion and bias computed for each sampling interval are used to evaluate the uncertainty during each hydrological period. High underestimation is made during flood periods when high-concentration period is overlooked. On the contrary, high sampling frequencies (from 3 h to 1 day) lead to a systematic overestimation (bias around 3%): highest concentrations are overweighted by the interpolation of the concentration in such case. The in situ sampling protocol generates less than 1% of load estimation error and sample highest concentration peaks. We consider useful such newly emerging field technologies to assess short-term variations of water quality parameters, to minimize the number of samples to be analysed and to assess the quality state of the stream at any time

Understanding nitrogen transfer dynamics in a small agricultural catchment: Comparison of a distributed (TNT2) and a semi distributed (SWAT) modeling approaches

The coupling of an hydrological and a crop model is an efficient approach to study the impact of the interactions between agricultural practices and catchment physical characteristics on stream water quality. We analyzed the consequences of using different modeling approaches of the processes controlling the nitrogen (N) dynamics in a small agricultural catchment monitored for 15 years. Two agro-hydrological models were applied: the fully distributed model TNT2 and the semi-distributed SWAT model. Using the same input dataset, the calibration process aimed at reproducing the same annual water and N balance in both models, to compare the spatial and temporal variability of the main N processes. The models simulated different seasonal cycles for soil N. The main processes involved were N mineralization and denitrification. TNT2 simulated marked seasonal variations with a net increase of mineralization in autumn, after a transient immobilization phase due to the burying of the straw with low C:N ratio. SWAT predicted a steady humus mineralization with an increase when straws are buried and a decrease afterwards. Denitrification was mainly occuring in autumn in TNT2 because of the dynamics of N availability in soil and of the climatic and hydrological conditions. SWAT predicts denitrification in winter, when mineral N is available in soil layers. The spatial distribution of these two processes was different as well: less denitrification in bottom land and close to ditches in TNT2, as a result of N transfer dynamics. Both models simulate correctly global trend and inter-annual variability of N losses in small agricultural catchment when a sufficient amount data is available for calibration. However, N processes and their spatial interactions are simulated very differently, in particular soil mineralization and denitrification. The use of such tools for prediction must be considered with care, unless a proper calibration and validation of the different N processes is carried out

Rare predicted loss-of-function variants of type I IFN immunity genes are associated with life-threatening COVID-19

Background: We previously reported that impaired type I IFN activity, due to inborn errors of TLR3- and TLR7-dependent type I interferon (IFN) immunity or to autoantibodies against type I IFN, account for 15–20% of cases of life-threatening COVID-19 in unvaccinated patients. Therefore, the determinants of life-threatening COVID-19 remain to be identified in ~ 80% of cases. Methods: We report here a genome-wide rare variant burden association analysis in 3269 unvaccinated patients with life-threatening COVID-19, and 1373 unvaccinated SARS-CoV-2-infected individuals without pneumonia. Among the 928 patients tested for autoantibodies against type I IFN, a quarter (234) were positive and were excluded. Results: No gene reached genome-wide significance. Under a recessive model, the most significant gene with at-risk variants was TLR7, with an OR of 27.68 (95%CI 1.5–528.7, P = 1.1 × 10−4) for biochemically loss-of-function (bLOF) variants. We replicated the enrichment in rare predicted LOF (pLOF) variants at 13 influenza susceptibility loci involved in TLR3-dependent type I IFN immunity (OR = 3.70[95%CI 1.3–8.2], P = 2.1 × 10−4). This enrichment was further strengthened by (1) adding the recently reported TYK2 and TLR7 COVID-19 loci, particularly under a recessive model (OR = 19.65[95%CI 2.1–2635.4], P = 3.4 × 10−3), and (2) considering as pLOF branchpoint variants with potentially strong impacts on splicing among the 15 loci (OR = 4.40[9%CI 2.3–8.4], P = 7.7 × 10−8). Finally, the patients with pLOF/bLOF variants at these 15 loci were significantly younger (mean age [SD] = 43.3 [20.3] years) than the other patients (56.0 [17.3] years; P = 1.68 × 10−5). Conclusions: Rare variants of TLR3- and TLR7-dependent type I IFN immunity genes can underlie life-threatening COVID-19, particularly with recessive inheritance, in patients under 60 years old

Correction to: Risk-reducing salpingo-oophorectomy, natural menopause, and breast cancer risk: an international prospective cohort of BRCA1 and BRCA2 mutation carriers.

After publication of the original article [1], we were notified that columns in Table 2 were erroneously displayed

The Influence of Number and Timing of Pregnancies on Breast Cancer Risk for Women With BRCA1 or BRCA2 Mutations

Background: Full-term pregnancy (FTP) is associated with a reduced breast cancer (BC) risk over time, but women are at increased BC risk in the immediate years following an FTP. No large prospective studies, however, have examined whether the number and timing of pregnancies are associated with BC risk for BRCA1 and BRCA2 mutation carriers. Methods: Using weighted and time-varying Cox proportional hazards models, we investigated whether reproductive events are associated with BC risk for mutation carriers using a retrospective cohort (5707 BRCA1 and 3525 BRCA2 mutation carriers) and a prospective cohort (2276 BRCA1 and 1610 BRCA2 mutation carriers), separately for each cohort and the combined prospective and retrospective cohort. Results: For BRCA1 mutation carriers, there was no overall association with parity compared with nulliparity (combined hazard ratio [HRc] ¼ 0.99, 95% confidence interval [CI] ¼ 0.83 to 1.18). Relative to being uniparous, an increased number of FTPs was associated with decreased BC risk (HRc¼ 0.79, 95% CI ¼ 0.69 to 0.91; HRc¼ 0.70, 95% CI ¼ 0.59 to 0.82; HRc¼ 0.50, 95% CI ¼ 0.40 to 0.63, for 2, 3, and 4 FTPs, respectively, Ptrend < .0001) and increasing duration of breastfeeding was associated with decreased BC risk (combined cohort Ptrend ¼ .0003). Relative to being nulliparous, uniparous BRCA1 mutation carriers were at increased BC risk in the prospective analysis (prospective hazard ration [HRp] ¼ 1.69, 95% CI ¼ 1.09 to 2.62). For BRCA2 mutation carriers, being parous was associated with a 30% increase in BC risk (HRc ¼ 1.33, 95% CI ¼ 1.05 to 1.69), and there was no apparent decrease in risk associated with multiparity except for having at least 4 FTPs vs. 1 FTP (HRc¼ 0.72, 95% CI ¼ 0.54 to 0.98). Conclusions: These findings suggest differential associations with parity between BRCA1 and BRCA2 mutation carriers with higher risk for uniparous BRCA1 carriers and parous BRCA2 carriers

Gestion tissulaire parodontale pré per et post traitements orthodontiques

Lors de traitements orthodontiques, la mise en place des appareillages ainsi que certains mouvements dentaires sont potentiellement parodontopathogènes. La prise en compte de l'élargissement des indications de l'orthodontie à l'ensemble de la population adulte implique la gestion de pathologies parodontales plus sévères. La formation d'une équipe thérapeutique orthodontiste-parodontiste devient nécessaire pour maintenir la santé parodontale du patient. Il paraît important d'intégrer le patient dans un système de suivi parodontal durant son traitement orthodontique, pour prévenir, intercepter ou traiter une pathologie naissante. Les apports de la parodontie à l'orthodontie sont multiples de l'éducation à l'hygiène orale à la chirurgie plastique parodontale.NANTES-BU Médecine pharmacie (441092101) / SudocPARIS-BIUM (751062103) / SudocLILLE2-UFR Odontologie (593502202) / SudocNANTES-Bib.Odontologie (441092219) / SudocSudocFranceF