Technical Report: Observations and reanalyses data: comparison and trends in Southeast Asia

Reanalyses data sets, being temporally and spatially complete and available on six hourly timescales, are extremely convenient to use. Real observations represent the climate system with greater fidelity than reanalyses can, given that the latter are a complicated blend of observations and models via an assimilation scheme and rely heavily on the assimilation scheme where observations are absent. Knowing whether the reanalyses data reflects real data can be difficult to establish. In this part of the report, the observed data is compared with three reanalyses data sets for the SE Asia region. We use observations from SYNOP and METAR reports. SYNOP and METAR data are, in effect, observations taken at met stations and delivered to the Global Telecommunication System (GTS). Once in the GTS, they can be archived by institutions such as those delivering weather forecasts. Access to these data via the archives is generally much easier than through the individual Met Agencies. This is particularly true in the case of a study covering multiple nation states. These datasets are described in more detail in Sections 1.1 and 1.2

Evaluation of short-term toxicity of ammonia and nitrite on the survival of whiteleg shrimp, Litopenaeus vannamei juveniles

The effects of short-term toxicity of total ammonia nitrogen (TAN) and nitrite were estimated in juveniles of Litopenaeus vannamei under laboratory conditions. In the first experiment, L. vannamei juveniles were exposed to different concentrations of ammonia (0, 5, 10, 15, 20, 30, and 40 mg of TAN L-1) or nitrite (0, 5, 10, 20, 30, 40, and 50 mg of NO2--N L-1), using the static renewal method at a salinity of 20 ppt and pH 8.2. The survival rates of juveniles significantly decreased when exposed to increased concentrations of ammonia or nitrite during the 96 h bioassays. The 24, 48, 72, and 96 h LC50 values of TAN in juveniles were 45.5, 30.1, 13.8, and 6.3 mg L-1, respectively, while the LC50 values of NO2--N at 24, 48, 72, and 96 h were 37.6, 16.7, 8.8, and 4.8 mg L-1, respectively. Experiment 2 evaluated the tolerance of L. vannamei juveniles at various salinities (5, 10, 15, and 20 ppt) under a high concentration of ammonia or nitrite (5 mg L-1). Results showed that the survival rates of L. vannamei at 5 ppt and 10 ppt were significantly lower than those at 20 ppt after 72 h and 96 h of exposure

Assessing evidence for avian-to-human transmission of influenza A/H9N2 virus in rural farming communities in northern Vietnam

Rural farming communities in northern Vietnam do not routinely practice vaccination for influenza A viruses (IAV) for either humans or poultry, which enables us to study transmission intensity via seroepidemiology. Using samples from a longitudinal cohort of farming households, we determined the number of symptomatic and asymptomatic human infections for seasonal IAV and avian A/H9 over 2 years. As expected, we detected virologically confirmed acute cases of seasonal IAV in humans, as well as large numbers of subclinical seroconversions to A/H1pdm [55/265 (21 %)], A/H3 [95/265 (36 %)] and A/H9 [24/265 (9 %)]. Five of the A/H9 human seroconverters likely represented true infections rather than heterosubtypic immunity, because the individuals seroconverted solely to A/H9. Among co-located poultry, we found significantly higher seroprevalance for A/H5 compared to A/H9 in both chickens and ducks [for northern study sites overall, 337/1105 (30.5 %) seropositive for A/H5 and 123/1105 (11.1 %) seropositive for A/H9]

Cosmic-muon characterization and annual modulation measurement with Double Chooz detectors

A study on cosmic muons has been performed for the two identical near and far neutrino detectors of the Double Chooz experiment, placed at ∼120 and ∼300 m.w.e. underground respectively, including the corresponding simulations using the MUSIC simulation package. This characterization has allowed us to measure the muon flux reaching both detectors to be (3.64 ± 0.04) × 10-4 cm-2s-1 for the near detector and (7.00 ± 0.05) × 10-5 cm-2s-1 for the far one. The seasonal modulation of the signal has also been studied observing a positive correlation with the atmospheric temperature, leading to an effective temperature coefficient of αT = 0.212 ± 0.024 and 0.355 ± 0.019 for the near and far detectors respectively. These measurements, in good agreement with expectations based on theoretical models, represent one of the first measurements of this coefficient in shallow depth installations