DIRAC framework evaluation for the Fermi\boldsymbol{Fermi}-LAT and CTA experiments

DIRAC (Distributed Infrastructure with Remote Agent Control) is a general framework for the management of tasks over distributed heterogeneous computing environments. It has been originally developed to support the production activities of the LHCb (Large Hadron Collider Beauty) experiment and today is extensively used by several particle physics and biology communities. Current ($Fermi$ Large Area Telescope -- LAT) and planned (Cherenkov Telescope Array -- CTA) new generation astrophysical/cosmological experiments, with very large processing and storage needs, are currently investigating the usability of DIRAC in this context. Each of these use cases has some peculiarities: $Fermi$-LAT will interface DIRAC to its own workflow system to allow the access to the grid resources, while CTA is using DIRAC as workflow management system for Monte Carlo production and analysis on the grid. We describe the prototype effort that we lead toward deploying a DIRAC solution for some aspects of $Fermi$-LAT and CTA needs.Comment: proceedings to CHEP 2013 conference : http://www.chep2013.org

Anisotropic Surface Mesh Generation

Projet MENUSINAnisotropic adapted unstructured triangular surface grids are generated using a new and efficient procedure based upon the Delaunay principle. The mesh anisotropy is controlled by a change of metrics over the surface. In order to improve the surface grid definition, a generalization of the Farin's algorithm has been developed to obtain \lq $G^1$\rq   surfaces by joining triangular Bézier surface patches. Different local mesh operators are proposed to control the surface grid generation process and a remeshing anisotropic grid generation algorithm is described. This algorithm has been developed keeping in mind its 3D generalization

Implementation and assessment of a model including mixotrophs and the carbonate cycle (Eco3M_MIX-CarbOx v1.0) in a highly dynamic Mediterranean coastal environment (Bay of Marseille, France) – Part 1: Evolution of ecosystem composition under limited light and nutrient conditions

Many current biogeochemical models rely on an autotrophic versus heterotrophic food web representation. However, in recent years, an increasing number of studies have begun to challenge this approach. Several authors have highlighted the importance of protists capable of combining photoautotrophic and heterotrophic nutrition in a single cell. These mixotrophic protists are known to play an important role in the carbon cycle. Here, we present a new biogeochemical model that represents the food web using variable stoichiometry. It contains the classic compartments such as zooplankton, phytoplankton, and heterotrophic bacteria and a newly added compartment to represent two types of mixotrophic protists: non-constitutive mixotrophs (NCMs) and constitutive mixotrophs (CMs). We demonstrate that the model correctly reproduces the characteristics of NCMs and CMs and proceed to study the impact of light and nutrient limitation on planktonic ecosystem structure in a highly dynamic Mediterranean coastal area, namely the Bay of Marseille (BoM, France), paying special attention to the dynamics of mixotrophic protists in these limiting conditions. In addition, we investigate the carbon, nitrogen, and phosphorus fluxes associated with mixotrophic protists and showed the following: (i) the portion of the ecosystem in terms of the percentage of carbon biomass occupied by NCMs decreases when resources (nutrient and prey concentrations) decrease, although their mixotrophy allows them to maintain a carbon biomass almost as significant as the copepod one (129.8 and 148.7 mmol C m−3, respectively), as photosynthesis increases as a food source, and (ii) the portion of the ecosystem in terms of the percentage of carbon biomass occupied by CM increases when nutrient concentrations decrease due to their capability to ingest prey to supplement their N and P needs. In addition to providing new insights regarding the conditions that lead to the emergence of mixotrophs in the BoM, this work provides a new tool to perform long-term studies and predictions of mixotroph dynamics in coastal environments under different environmental forcings.</p

New Progress in Anisotropic Grid Adaptation for Inviscid and Viscous Flows Simulations

Projet MENUSINTwo new ideas for anisotropic adaptation of unstructured triangular grids are presented with particular emphasis to fluid flows computations. The first concept enables a suitable extension of our mesh adaptation to the case of systems of PDE like Navier-Stokes equations and the second makes possible a correct boundary layer computation which was until now one of the major weakness of anisotropic adaptations in CFD

Effect of social distancing for office landscape on the ergonomic illumination

In office buildings valuable energy is wasted if not properly regulated as a function of presence of humans and active demands for illumination levels. Effective and clever usage of the sunlight is essential for optimal use of energy resources in large office buildings. Additionally, productivity of the employees can be improved by maintaining a constant light intensity. In context of social distancing enforced onto landscape area structure and occupancy, they have effects in the illumination pattern and ergonomics. This paper presents the practical setup to mimic the illumination regulatory problem in landscape offices and the dynamic properties of such a system in the context of social distancing regulations. The light level control is performed with distributed predictive control, whereas a comparison is made among various situations. The original contribution of the paper is a fast, adaptive control algorithm, which can deal with changing context parameters; e.g. varying landscape office structures. Copyright (C) 2020 The Authors

A finite element method with mesh adaptivity for computing vortex states in fast-rotating Bose-Einstein condensates

Numerical computations of stationary states of fast-rotating Bose-Einstein condensates require high spatial resolution due to the presence of a large number of quantized vortices. In this paper we propose a low-order finite element method with mesh adaptivity by metric control, as an alternative approach to the commonly used high order (finite difference or spectral) approximation methods. The mesh adaptivity is used with two different numerical algorithms to compute stationary vortex states: an imaginary time propagation method and a Sobolev gradient descent method. We first address the basic issue of the choice of the variable used to compute new metrics for the mesh adaptivity and show that simultaneously refinement using the real and imaginary part of the solution is successful. Mesh refinement using only the modulus of the solution as adaptivity variable fails for complicated test cases. Then we suggest an optimized algorithm for adapting the mesh during the evolution of the solution towards the equilibrium state. Considerable computational time saving is obtained compared to uniform mesh computations. The new method is applied to compute difficult cases relevant for physical experiments (large nonlinear interaction constant and high rotation rates).Comment: to appear in J. Computational Physic

Numerical investigation of three-dimensional asymmetric hovering flapping flight

Direct numerical simulations are performed to assess the aerodynamic performance of three-dimensional wings undergoing asymmetric hovering flapping flight. A large number of flapping kinematics is investigated, varying the pitch rate and the upstroke and downstroke angles of attack. We show that, for all cases, time-average performance is driven, to leading order, by the mean angle of attack over a flapping period despite the increased contribution of drag to vertical force with increased stroke plane angle. We hence suggest that asymmetric hovering is not intrinsically more efficient than normal hovering, conversely to what has been previously reported in the literature. This may explain the underrepresentation of this flight mode in nature

Toxicity Assays in Nanodrops Combining Bioassay and Morphometric Endpoints

BACKGROUND: Improved chemical hazard management such as REACH policy objective as well as drug ADMETOX prediction, while limiting the extent of animal testing, requires the development of increasingly high throughput as well as highly pertinent in vitro toxicity assays. METHODOLOGY: This report describes a new in vitro method for toxicity testing, combining cell-based assays in nanodrop Cell-on-Chip format with the use of a genetically engineered stress sensitive hepatic cell line. We tested the behavior of a stress inducible fluorescent HepG2 model in which Heat Shock Protein promoters controlled Enhanced-Green Fluorescent Protein expression upon exposure to Cadmium Chloride (CdCl(2)), Sodium Arsenate (NaAsO(2)) and Paraquat. In agreement with previous studies based on a micro-well format, we could observe a chemical-specific response, identified through differences in dynamics and amplitude. We especially determined IC50 values for CdCl(2) and NaAsO(2), in agreement with published data. Individual cell identification via image-based screening allowed us to perform multiparametric analyses. CONCLUSIONS: Using pre/sub lethal cell stress instead of cell mortality, we highlighted the high significance and the superior sensitivity of both stress promoter activation reporting and cell morphology parameters in measuring the cell response to a toxicant. These results demonstrate the first generation of high-throughput and high-content assays, capable of assessing chemical hazards in vitro within the REACH policy framework

Experimental characterization of mechanical properties of the cement-aggregate interface in concrete

International audienceThe microstructure of the Interfacial Transition Zone (ITZ) between the aggregates and the cement paste is characterized by a higher porosity than that of the bulk paste. The particular properties of this zone strongly influence the mechanical behavior of concrete. Microscopic cracks, which develop during subsequent loading, appear either in the matrix (cement paste or mortar) or along the cement-aggregates interface. Cracks could be caused by either tensile, shear strengths or by combinations of both. In this work, the mechanical properties of the cement paste – aggregate sample are experimentally studied. The experimental tests are performed on parallelepipedic samples at classical aggregate scale (one centimeter sections). These samples are composed of limestone aggregates and Portland cement paste, hereafter named ''composite ". The cement paste is prepared with a water/cement ratio of 0.5. The shape of the prepared composites makes them convenient for direct tensile and shear tests. At different stages of hydration, we performed direct tensile and shear tests on the composites by means of specific devices. The same tests were carried out on the cement paste in order to compare with the composite results. The analysis of the experimental results showed that the tensile strength of the cement-aggregate interface was about 30% lower than that of the cement paste tensile strength. Also, the shear strength of the cement-aggregate interface was smaller than the shear strength of the cement paste. In the same way as macroscopic Mohr–Coulomb criterion, we observed an increase of shear strength when normal stress increased. It provides access to a local cohesion (c) and a local friction angle ðUÞ at classical aggregate scale

Comparaison de méthodes dévaluation d'efforts par mesures PIV

International audienceDans ce papier, nous mettons en œuvre et comparons deux méthodes de calcul d’efforts s’appliquant sur une structure immergée dans un écoulement, à partir de données PIV stéréo. Les formulations se basent sur un bilan global de quantité de mouvement moyenné en temps. Une de ces méthodes permet, dans le cadre aérodynamique, de distinguer les contributions de traînée induite et de traînée de profil à partir de mesures du sillage uniquement. Les prédictions de traînée utilisant des données PIV stéréo et sonde 5-trous sont comparées à des mesures directes faites par balance. Ces comparaisons montrent que l’approche globale alimentée par des données PIV est effectivement viable, et qu’elle peut être utilisée pour décrire et étudier les phénomènes physiques à l’origine de la traînée