34 research outputs found

    Characterization of a repertoire of tomato fruit genetic variants in the San Marzano genetic background

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    [EN] San Marzano (SM) is a worldwide famous tomato Italian traditional landrace characterized by elongated fruits with a dual-purpose use in the fresh and processing market. A repertoire of mutations affecting the fruit and of interest for commercial breeding were introduced into the SM genetic background following backcross schemes. The lines generated included 13 genotypes each carrying a single mutation in genes controlling a) the content of all pigments (hp-1, hp-2, pd), b) of carotenoids (r, t, at, B, B_mo(B)), c) of chlorophyll (gf), d) of flavonoids (y) or e) the ripening process (Nr, rin, Gr). Five lines carrying a combination of two mutations were also included. Analysis of SNP polymorphisms showed that the genetic distance of the lines from the recurrent parent was very variable and not well predicted by the number of backcrosses because it was also a function of the dissimilarity of the donor parent. All the genotypes, together with an SM control, were grown in two consecutive years and characterized for vegetative, reproductive and fruit quality traits. Overall, the studied lines reproduced the SM typical phenotypes, but several differences also emerged as both possible negative or advantageous pleiotropic traits for fresh or processing uses and peeling. High pigment mutations confirmed the negative pleiotropic effects on plant fertility and fruit development described earlier and also negatively affected fruit post-harvest life. These latter defects were also reported in the carotenoid mutant tangerine. In contrast, absence of peel pigmentation in the y mutant was associated with positive postharvest properties as those fruit presented higher resistance to wrinkling and dehydration. Delayed ripening mutants showed positive post-harvest phenotypes, as expected. In conclusion, the study of the present repertoire of fruit variations in an elongated tomato genotype represents a contribution to expand the study of fruit physiology to unusual fruit types and to breed innovative tomato lines with valuable nutritional and technological properties.This work was supported by the Latium Region FILAS project "MIGLIORA", by the Italian Ministry of Agriculture (MiPAAF) under the AGROENER project (D.D. n. 26329, 1 april 2016) - http://agroener.crea.gov.it/and by the European Commission through-H2020 SFS-7a-2014 TRADITOM (634561).Dono, G.; Picarella, ME.; Pons Puig, C.; Santangelo, E.; Monforte Gilabert, AJ.; Granell Richart, A.; Mazzucato, A. (2020). Characterization of a repertoire of tomato fruit genetic variants in the San Marzano genetic background. Scientia horticulturae (Online). 261:1-10. https://doi.org/10.1016/j.scienta.2019.108927S11026

    ORIGINAL ARTICLE Combining color and depth for enhanced image segmentation and retargeting

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    Abstract As depth cameras become more popular, pixel depth information becomes easier to obtain. This information can clearly enhance many image processing applications. However, combining depth and color information is not straightforward as these two signals can have different noise characteristics, differences in resolution, and their boundaries do not generally agree. We present a technique that combines depth and color image information from real devices in synergy. In particular, we focus on combining them to improve image segmentation. We use color information to fill and clean depth and use depth to enhance color image segmentation. We demonstrate the utility of the combined segmentation for extracting layers and present a novel image retargeting algorithm for layered images

    Histone methylation controls telomerase-independent telomere lengthening in cells undergoing dedifferentiation

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    AbstractCellular dedifferentiation underlies topical issues in biology such as regeneration and nuclear cloning and has common features in plants and animals. In plants, this process characterizes the transition of differentiated leaf cells to protoplasts (plant cells devoid of cell walls) and is accompanied by global chromatin reorganization associated with reprogramming of gene expression. A screen for mutants defective in proliferation and callus formation identified kyp-2—a mutant in the KRYPTONITE (KYP)/SUVH4 gene encoding a histone H3 lysine 9 (H3K9) methyltransferase. Analysis of telomere length revealed stochastic telomerase-independent lengthening of telomeres in wild type but not in kyp-2 protoplasts. In kyp-2 mutant, telomeric repeats were no longer associated with dimethylated H3K9. The Arabidopsis telomerase reverse transcriptase (tert) mutant displayed accelerated proliferation despite its short telomeres, though it also showed accelerated cell death. Microarray analysis uncovered several components of the ubiquitin proteolytic system, which are downregulated in kyp-2 compared to wild-type protoplasts. Thus, our results suggest that histone methylation activity is required for the establishment/maintenance of the dedifferentiated state and/or reentry into the cell cycle, at least partly, through activation of genes whose products are involved in the ubiquitin proteolytic pathway. In addition, our results illuminate the complexity of cellular dedifferentiation, particularly the occurrence of DNA recombination that can lead to genome instability

    Single Molecule Imaging of T-DNA Intermediates Following Agrobacterium tumefaciens Infection in Nicotiana benthamiana

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    Plant transformation mediated by Agrobacterium tumefaciens is a well-studied phenomenon in which a bacterial DNA fragment (T-DNA), is transferred to the host plant cell, as a single strand, via type IV secretion system and has the potential to reach the nucleus and to be integrated into its genome. While Agrobacterium-mediated transformation has been widely used for laboratory-research and in breeding, the time-course of its journey from the bacterium to the nucleus, the conversion from single- to double-strand intermediates and several aspects of the integration in the genome remain obscure. In this study, we sought to follow T-DNA infection directly using single-molecule live imaging. To this end, we applied the LacO-LacI imaging system in Nicotiana benthamiana, which enabled us to identify double-stranded T-DNA (dsT-DNA) molecules as fluorescent foci. Using confocal microscopy, we detected progressive accumulation of dsT-DNA foci in the nucleus, starting 23 h after transfection and reaching an average of 5.4 and 8 foci per nucleus at 48 and 72 h post-infection, respectively. A time-course diffusion analysis of the T-DNA foci has demonstrated their spatial confinement
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