91 research outputs found

    Nuclear Power in Taiwan: A Clash of Views

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    Рукопись поступила в редакцию: 26.03.21. Принята к публикации: 23.07.21.Received: 26.03.21. Accepted: 23.07.21.В статье рассматривается проблема атомной энергетики Тайваня, ставшая особенно актуальной после выборов 2016 г., когда победившая Демократическая прогрессивная партия (ДПП), во главе с президентом Цай Инвэнь, объявила об отказе от использования атомной энергетики к 2025 г. Данный курс, принятый на фоне многотысячных протестов после аварии на Фукусиме-1, к 2020 году обрел немало как сторонников, так и противников, став предметом политической борьбы между ныне правящей ДПП и оппозиционным Гоминьданом. В работе анализируется аргументация сторон, описываются противоборствующие организационные структуры и их связь с политическими силами. Можно выделить 3 основных общих вопроса, по которым идут споры: безопасность, экология и экономика. В сфере безопасности противники атомной энергетики на Тайване используют в качестве примера аварию на Чернобыльской АЭС и Фукусиме-1, говоря об опасности атомной энергетики как таковой, невозможности ее контролировать и обеспечить надлежащий уровень безопасности ядерных объектов. Сторонники же доказывают, что системы безопасности АЭС на Тайване превосходят аналогичные на Фукусиме-1, а сама компания постоянно их модернизирует. В сфере экологии наиболее остро стоит вопрос утилизации низкоактивных ядерных отходов, уделяется большое внимание уменьшению выбросов CO2 в атмосферу. В сфере экономики отмечается недостаток резервных мощностей на Тайване, подчеркивается относительная дороговизна альтернативных экологически чистых источников энергии. Антиядерные активисты говорят о высокой стоимости строительства и эксплуатации АЭС, утверждая, что в долгосрочной перспективе АЭС проигрывает возобновляемым источникам энергии как экономически, так и технологически, и считая атомную энергетику устаревающей отраслью.The article addresses the issue of nuclear energy in Taiwan, which became particularly relevant after the 2016 elections, when the winning Democratic Progressive Party (DPP), led by President Tsai Ing-wen, announced the rejection of the use of nuclear energy by 2025. By 2020, adopted against the backdrop of thousands of protests after the Fukushima-1 accident, this course gained many supporters and opponents and became the subject of a political struggle between the currently ruling DPP and its rival Kuomintang. The paper analyzes the reasoning by the parties, describes the opposing organizational structures and their relations with political forces. Three main general issues are in the focus of debates: security, ecology and economics. In security matters, opponents of nuclear energy in Taiwan use the Chernobyl accident and Fukushima-1 as an example, talking about the danger of nuclear energy per se, the inability to control it and ensure an appropriate level of safety of nuclear facilities. Supporters argue that the safety systems of nuclear power plants in Taiwan are superior to those at Fukushima-1, and the company itself is constantly upgrading them. In the ecology sector, the most acute issue is low-level nuclear waste disposal, and the opponents pay much attention to reducing CO2 emissions into the atmosphere. In the area of economic matters, there is a lack of reserve capacity in Taiwan, and the parties emphasize the relatively high cost of alternative environmentally friendly energy sources. Anti-nuclear activists talk about the high costs of building and operating nuclear power plants, arguing that in the long run, nuclear power plants lose out to renewable energy sources both economically and technologically, considering atomic power as an outdated industry

    Patterns and Collective Behavior in Granular Media: Theoretical Concepts

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    Granular materials are ubiquitous in our daily lives. While they have been a subject of intensive engineering research for centuries, in the last decade granular matter attracted significant attention of physicists. Yet despite a major efforts by many groups, the theoretical description of granular systems remains largely a plethora of different, often contradicting concepts and approaches. Authors give an overview of various theoretical models emerged in the physics of granular matter, with the focus on the onset of collective behavior and pattern formation. Their aim is two-fold: to identify general principles common for granular systems and other complex non-equilibrium systems, and to elucidate important distinctions between collective behavior in granular and continuum pattern-forming systems.Comment: Submitted to Reviews of Modern Physics. Full text with figures (2Mb pdf) avaliable at http://mti.msd.anl.gov/AransonTsimringReview/aranson_tsimring.pdf Community responce is appreciated. Comments/suggestions send to [email protected]

    Predicting Phenotypic Diversity and the Underlying Quantitative Molecular Transitions

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    During development, signaling networks control the formation of multicellular patterns. To what extent quantitative fluctuations in these complex networks may affect multicellular phenotype remains unclear. Here, we describe a computational approach to predict and analyze the phenotypic diversity that is accessible to a developmental signaling network. Applying this framework to vulval development in C. elegans, we demonstrate that quantitative changes in the regulatory network can render ~500 multicellular phenotypes. This phenotypic capacity is an order-of-magnitude below the theoretical upper limit for this system but yet is large enough to demonstrate that the system is not restricted to a select few outcomes. Using metrics to gauge the robustness of these phenotypes to parameter perturbations, we identify a select subset of novel phenotypes that are the most promising for experimental validation. In addition, our model calculations provide a layout of these phenotypes in network parameter space. Analyzing this landscape of multicellular phenotypes yielded two significant insights. First, we show that experimentally well-established mutant phenotypes may be rendered using non-canonical network perturbations. Second, we show that the predicted multicellular patterns include not only those observed in C. elegans, but also those occurring exclusively in other species of the Caenorhabditis genus. This result demonstrates that quantitative diversification of a common regulatory network is indeed demonstrably sufficient to generate the phenotypic differences observed across three major species within the Caenorhabditis genus. Using our computational framework, we systematically identify the quantitative changes that may have occurred in the regulatory network during the evolution of these species. Our model predictions show that significant phenotypic diversity may be sampled through quantitative variations in the regulatory network without overhauling the core network architecture. Furthermore, by comparing the predicted landscape of phenotypes to multicellular patterns that have been experimentally observed across multiple species, we systematically trace the quantitative regulatory changes that may have occurred during the evolution of the Caenorhabditis genus

    Stochastic Coherence in an Oscillatory Gene Circuit Model

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    We show that noise-induced oscillations in a gene circuit model display stochastic coherence, that is, a maximum in the regularity of the oscillations as a function of noise amplitude. The effect is manifest as a system-size effect in a purely stochastic molecular reaction description of the circuit dynamics. We compare the molecular reaction model behavior with that predicted by a rate equation version of the same system. In addition, we show that commonly used reduced models that ignore fast operator reactions do not capture the full stochastic behavior of the gene circuit. Stochastic coherence occurs under conditions that may be physiologically relevant

    External Stimuli Mediate Collective Rhythms: Artificial Control Strategies

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    The artificial intervention of biological rhythms remains an exciting challenge. Here, we proposed artificial control strategies that were developed to mediate the collective rhythms emerging in multicellular structures. Based on noisy repressilators and by injecting a periodic control amount to the extracellular medium, we introduced two typical kinds of control models. In one, there are information exchanges among cells, where signaling molecules receive the injected stimulus that freely diffuses toward/from the intercellular medium. In the other, there is no information exchange among cells, but signaling molecules also receive the stimulus that directionally diffuses into each cell from the common environment. We uncovered physical mechanisms for how the stimulus induces, enhances or ruins collective rhythms. We found that only when the extrinsic period is close to an integer multiplicity of the averaged intrinsic period can the collective behaviors be induced/enhanced; otherwise, the stimulus possibly ruins the achieved collective behaviors. Such entrainment properties of these oscillators to external signals would be exploited by realistic living cells to sense external signals. Our results not only provide a new perspective to the understanding of the interplays between extrinsic stimuli and intrinsic physiological rhythms, but also would lead to the development of medical therapies or devices

    Master equation simulation analysis of immunostained Bicoid morphogen gradient

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    <p>Abstract</p> <p>Background</p> <p>The concentration gradient of Bicoid protein which determines the developmental pathways in early <it>Drosophila </it>embryo is the best characterized morphogen gradient at the molecular level. Because different developmental fates can be elicited by different concentrations of Bicoid, it is important to probe the limits of this specification by analyzing intrinsic fluctuations of the Bicoid gradient arising from small molecular number. Stochastic simulations can be applied to further the understanding of the dynamics of Bicoid morphogen gradient formation at the molecular number level, and determine the source of the nucleus-to-nucleus expression variation (noise) observed in the Bicoid gradient.</p> <p>Results</p> <p>We compared quantitative observations of Bicoid levels in immunostained <it>Drosophila </it>embryos with a spatially extended Master Equation model which represents diffusion, decay, and anterior synthesis. We show that the intrinsic noise of an autonomous reaction-diffusion gradient is Poisson distributed. We demonstrate how experimental noise can be identified in the logarithm domain from single embryo analysis, and then separated from intrinsic noise in the normalized variance domain of an ensemble statistical analysis. We show how measurement sensitivity affects our observations, and how small amounts of rescaling noise can perturb the noise strength (Fano factor) observed. We demonstrate that the biological noise level in data can serve as a physical constraint for restricting the model's parameter space, and for predicting the Bicoid molecular number and variation range. An estimate based on a low variance ensemble of embryos suggests that the steady-state Bicoid molecular number in a nucleus should be larger than 300 in the middle of the embryo, and hence the gradient should extend to the posterior end of the embryo, beyond the previously assumed background limit. We exhibit the predicted molecular number gradient together with measurement effects, and make a comparison between conditions of higher and lower variance respectively.</p> <p>Conclusion</p> <p>Quantitative comparison of Master Equation simulations with immunostained data enabled us to determine narrow ranges for key biophysical parameters, which for this system can be independently validated. Intrinsic noise is clearly detectable as well, although the staining process introduces certain limits in resolution.</p

    In-Silico Patterning of Vascular Mesenchymal Cells in Three Dimensions

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    Cells organize in complex three-dimensional patterns by interacting with proteins along with the surrounding extracellular matrix. This organization provides the mechanical and chemical cues that ultimately influence a cell's differentiation and function. Here, we computationally investigate the pattern formation process of vascular mesenchymal cells arising from their interaction with Bone Morphogenic Protein-2 (BMP-2) and its inhibitor, Matrix Gla Protein (MGP). Using a first-principles approach, we derive a reaction-diffusion model based on the biochemical interactions of BMP-2, MGP and cells. Simulations of the model exhibit a wide variety of three-dimensional patterns not observed in a two-dimensional analysis. We demonstrate the emergence of three types of patterns: spheres, tubes, and sheets, and show that the patterns can be tuned by modifying parameters in the model such as the degradation rates of proteins and chemotactic coefficient of cells. Our model may be useful for improved engineering of three-dimensional tissue structures as well as for understanding three dimensional microenvironments in developmental processes.National Institutes of Health (U.S.) (GM69811)United States. Dept. of Energy (DOE CSGF fellowship

    Mitochondrial Variability as a Source of Extrinsic Cellular Noise

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    We present a study investigating the role of mitochondrial variability in generating noise in eukaryotic cells. Noise in cellular physiology plays an important role in many fundamental cellular processes, including transcription, translation, stem cell differentiation and response to medication, but the specific random influences that affect these processes have yet to be clearly elucidated. Here we present a mechanism by which variability in mitochondrial volume and functionality, along with cell cycle dynamics, is linked to variability in transcription rate and hence has a profound effect on downstream cellular processes. Our model mechanism is supported by an appreciable volume of recent experimental evidence, and we present the results of several new experiments with which our model is also consistent. We find that noise due to mitochondrial variability can sometimes dominate over other extrinsic noise sources (such as cell cycle asynchronicity) and can significantly affect large-scale observable properties such as cell cycle length and gene expression levels. We also explore two recent regulatory network-based models for stem cell differentiation, and find that extrinsic noise in transcription rate causes appreciable variability in the behaviour of these model systems. These results suggest that mitochondrial and transcriptional variability may be an important mechanism influencing a large variety of cellular processes and properties

    Role of Cell-to-Cell Variability in Activating a Positive Feedback Antiviral Response in Human Dendritic Cells

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    In the first few hours following Newcastle disease viral infection of human monocyte-derived dendritic cells, the induction of IFNB1 is extremely low and the secreted type I interferon response is below the limits of ELISA assay. However, many interferon-induced genes are activated at this time, for example DDX58 (RIGI), which in response to viral RNA induces IFNB1. We investigated whether the early induction of IFNBI in only a small percentage of infected cells leads to low level IFN secretion that then induces IFN-responsive genes in all cells. We developed an agent-based mathematical model to explore the IFNBI and DDX58 temporal dynamics. Simulations showed that a small number of early responder cells provide a mechanism for efficient and controlled activation of the DDX58-IFNBI positive feedback loop. The model predicted distributions of single cell responses that were confirmed by single cell mRNA measurements. The results suggest that large cell-to-cell variation plays an important role in the early innate immune response, and that the variability is essential for the efficient activation of the IFNB1 based feedback loop
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