Antimicrobial activity of an iron triple helicate

The prevalence of antibiotic resistance has resulted in the need for new approaches to be developed to combat previously easily treatable infections. Here we investigated the potential of the synthetic metallomolecules [Fe2L3]4+ and [Cu2(L’)2]2+ as antibacterial agents. Both molecules have been shown to bind DNA; [Fe2L3]4+ binds in the major groove and causes DNA coiling, whilst [Cu2(L’)2]2+ can act as an artificial nuclease. The work described here shows that only [Fe2L3]4+ is bactericidal for Bacillus subtilis and Escherichia coli. We demonstrate that [Fe2L3]4+ binds bacterial DNA in vivo and, strikingly, that it kills B. subtilis cells very rapidly

Factors Influencing Muscular Strength and Endurance in Disadvantaged Children From Low-Income Families

International Journal of Exercise Science 9(3): 306-317, 2016. Examining the correlates of muscular strength and endurance in children from low-income families will provide evidence for interventions to improve these parameters. The purpose of this study was to determine the predictors and trends of muscular strength and endurance in at-risk school-aged children. The sample included 1,232 children (Mean age = 8.8 ± 1.6 years; 625 girls, 607 boys; 60% Hispanic) recruited from three U.S. low-income schools. Children performed health-related fitness testing and wore pedometers for one school week. A stratified random subsample (n = 533) also wore accelerometers to record sedentary behaviors, MVPA, and vigorous physical activity. Generalized linear mixed models were employed to calculate odds ratios (OR) for achieving FITNESSGRAM’s push-up and curl-up standards (met standard = HFZ) from various predictors and to determine odds of achievement across grade levels. A student who achieved the HFZ for VO2 Peak had an OR = 1.66 (p \u3c 0.001) for achieving the HFZ for pushups and an OR = 1.99 (p \u3c 0.01) for achieving the HFZ for curl-ups. Additionally, students whose vigorous physical activity was 1% higher had an OR = 3.25 (p \u3c 0.05) for achieving the HFZ for curl-ups. For cohorts of students separated by one grade level, the OR = 0.48 (p \u3c 0.01) for achieving the HFZ for pushups and OR = 0.71 (p \u3c 0.01) for achieving the HFZ for curl-ups. The results suggest that VO2 Peak, vigorous physical activity, and grade level are significant predictors of muscular strength and endurance in at-risk children

Trapezoidal Wing Experimental Repeatability and Velocity Profiles in the 14- by 22-Foot Subsonic Tunnel

The AIAA Applied Aerodynamics Technical Committee sponsored a High Lift Prediction Workshop held in June 2010. For this first workshop, data from the Trapezoidal Wing experiments were used for comparison to CFD. This paper presents long-term and short-term force and moment repeatability analyses for the Trapezoidal Wing model tested in the NASA Langley 14- by 22-Foot Subsonic Tunnel. This configuration was chosen for its simplified high-lift geometry, publicly available set of test data, and previous CFD experience with this configuration. The Trapezoidal Wing is a three-element semi-span swept wing attached to a body pod. These analyses focus on configuration 1 tested in 1998 (Test 478), 2002 (Test 506), and 2003 (Test 513). This paper also presents model velocity profiles obtained on the main element and on the flap during the 1998 test. These velocity profiles are primarily at an angle of attack of 28 degrees and semi-span station of 83% and show confluent boundary layers and wakes

Molecular Dynamics Simulation of Compressible Fluid Flow in Two-Dimensional Channels

We study compressible fluid flow in narrow two-dimensional channels using a novel molecular dynamics simulation method. In the simulation area, an upstream source is maintained at constant density and temperature while a downstream reservoir is kept at vacuum. The channel is sufficiently long in the direction of the flow that the finite length has little effect on the properties of the fluid in the central region. The simulated system is represented by an efficient data structure, whose internal elements are created and manipulated dynamically in a layered fashion. Consequently the code is highly efficient and manifests completely linear performance in simulations of large systems. We obtain the steady-state velocity, temperature, and density distributions in the system. The velocity distribution across the channel is very nearly a quadratic function of the distance from the center of the channel and reveals velocity slip at the boundaries; the temperature distribution is only approximately a quartic function of this distance from the center to the channel. The density distribution across the channel is non-uniform. We attribute this non-uniformity to the relatively high Mach number, approximately 0.5, in the fluid flow. An equation for the density distribution based on simple compressibility arguments is proposed; its predictions agree well with the simulation results. Validity of the concept of local dynamic temperature and the variation of the temperature along the channel are discussed.Comment: 16 pages (in latex) + 8 figures (in a single ps file). Submitted to the Physical Review

Synthetic metallomolecules as agents for the control of DNA structure

This tutorial review summarises B-DNA structure and metallomolecule binding modes and illustrates some DNA structures induced by molecules containing metallic cations. The effects of aquated metal ions, cobalt amines, ruthenium octahedral metal complexes, metallohelicates and platinum complexes such as cis-platin are discussed alongside the techniques of NMR, X-ray crystallography, gel electrophoresis, circular dichroism, linear dichroism and molecular dynamics. The review will be of interest to people interested in both DNA structure and roles of metallomolecules in biological systems

Cooperative effects in nuclear excitation with coherent x-ray light

The interaction between super-intense coherent x-ray light and nuclei is studied theoretically. One of the main difficulties with driving nuclear transitions arises from the very narrow nuclear excited state widths which limit the coupling between laser and nuclei. In the context of direct laser-nucleus interaction, we consider the nuclear width broadening that occurs when in solid targets, the excitation caused by a single photon is shared by a large number of nuclei, forming a collective excited state. Our results show that for certain isotopes, cooperative effects may lead to an enhancement of the nuclear excited state population by almost two orders of magnitude. Additionally, an update of previous estimates for nuclear excited state population and signal photons taking into account the experimental advances of the x-ray coherent light sources is given. The presented values are an improvement by orders of magnitude and are encouraging for the future prospects of nuclear quantum optics.Comment: 22 pages, 4 figures, 5 tables; updated to the published version, one additional results tabl

Genomic landscape of human allele-specific DNA methylation

DNA methylation mediates imprinted gene expression by passing an epigenomic state across generations and differentially marking specific regulatory regions on maternal and paternal alleles. Imprinting has been tied to the evolution of the placenta in mammals and defects of imprinting have been associated with human diseases. Although recent advances in genome sequencing have revolutionized the study of DNA methylation, existing methylome data remain largely untapped in the study of imprinting. We present a statistical model to describe allele-specific methylation (ASM) in data from high-throughput short-read bisulfite sequencing. Simulation results indicate technical specifications of existing methylome data, such as read length and coverage, are sufficient for fullgenome ASM profiling based on our model. We used our model to analyze methylomes for a diverse set of human cell types, including cultured and uncultured differentiated cells, embryonic stem cells and induced pluripotent stem cells. Regions of ASM identified most consistently across methylomes are tightly connected with known imprinted genes and precisely delineate the boundaries of several known imprinting control regions. Predicted regions of ASM common to multiple cell types frequently mark noncoding RNA promoters and represent promising starting points for targeted validation. More generally, our model provides the analytical complement to cutting-edge experimental technologies for surveying ASM in specific cell types and across species

Benchmarking of 3D space charge codes using direct phase space measurements from photoemission high voltage DC gun

We present a comparison between space charge calculations and direct measurements of the transverse phase space for space charge dominated electron bunches after a high voltage photoemission DC gun followed by an emittance compensation solenoid magnet. The measurements were performed using a double-slit setup for a set of parameters such as charge per bunch and the solenoid current. The data is compared with detailed simulations using 3D space charge codes GPT and Parmela3D with initial particle distributions created from the measured transverse and temporal laser profiles. Beam brightness as a function of beam fraction is calculated for the measured phase space maps and found to approach the theoretical maximum set by the thermal energy and accelerating field at the photocathode.Comment: 11 pages, 23 figures. submitted to Phys Rev ST-A