Genomic Evolution of Two Acinetobacter baumannii Clinical Strains from ST-2 Clones Isolated in 2000 and 2010 (ST-2_clon_2000 and ST-2_clon_2010)

Acinetobacter baumannii is a successful nosocomial pathogen due to its ability to persist in hospital environments by acquiring mobile elements such as transposons, plasmids, and phages. In this study, we compared two genomes of A. baumannii clinical strains isolated in 2000 (ST-2_clon_2000) and 2010 (ST-2_clon_2010) from GenBank project PRJNA308422

An improved model for fast and reliable harbour wave agitation assessment

ABSTRACT: This study presents the new advances achieved in the field of harbour agitation climate assessment. Based on the improvement of an elliptic mild-slope model (MSP), which realistically reconstructs waves inside any-sized basin, represented by high-detailed unstructured meshes, and forced by real-shaped outer spectral data. A new solver is proposed for high performance runs, which allow fast agitation hindcast for statistical downtime analysis within an iterative and multi-scenario approach. Also, a realistic assimilation of partial reflection processes in quays/docks/wharfs/breakwaters is proposed. The model has been successfully validated in several harbours of special relevance in Spain with in situ measurements, through the assimilation of the hybrid downscaling (Camus et al., 2011) technique combined with monochromatic-based wave spectral reconstruction.This work has been also partially funded under the RETOS program of the Spanish Ministry of Science, Innovation and Universities (BIA2017-87213-R). We would like to thank Puertos del Estado of Spain for providing spectral outer wave spectral forcing and wave agitation measurements, for gather/organize each Port Authority base data required

Role of transforming growth factor B superfamily in ovarian and its relation to the pathogenesis of bovine cystic ovarian disease

En los últimos años se ha avanzado en la búsqueda por esclarecer los complejos mecanismos de control intraováricos que, concomitantemente con señales sistémicas, coordinan el reclutamiento, la selección y el crecimiento de los folículos desde el estadio primordial hasta la ovulación y formación del cuerpo lúteo. Una gran cantidad de factores de crecimiento, muchos de ellos pertenecientes a la Superfamilia del Factor de Crecimiento Transformante Beta (TGFB) son expresados por las células somáticas ováricas y ovocitos en desarrollo, ejecutando una función de regulación intraovárica en la foliculogénesis. La alteración de estos factores podría contribuir a la patogenia de enfermedades reproductivas como la enfermedad quística ovárica (EQO), uno de los desórdenes reproductivos más frecuentes en el ganado bovino lechero. Esta enfermedad provoca cuantiosas pérdidas para la producción pecuaria. Los avances en la comprensión de los mecanismos de regulación intraováricos facilitan el desarrollo de nuevos enfoques para el control y la manipulación de la función ovárica y la mejora de la fertilidad en el ganado doméstico.In recent years, progress has been made in the quest to elucidate the complex mechanisms of intraovarian control which, concomitantly with systemic signs, coordinate the recruitment, selection and growth of follicles from the primordial stage until ovulation, and corpus luteum formation. A large number of growth factors, many of them belonging to the Superfamily Transforming Growth Factor Beta (TGFB), are expressed by ovarian somatic cells and oocytes in development, exerting an intra-ovarian regulating function in folliculogenesis. The alteration of these factors may contribute to the pathogenesis of reproductive diseases such as cystic ovarian disease (COD), one of the most common reproductive disorders in dairy cattle. This disease causes considerable losses to livestock production. Advances in understanding the mechanisms of intraovarian regulation facilitates the development of new approaches for the control and manipulation of ovarian function and fertility improvement in domestic livestock.Fil: Matiller, Valentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Ciencias Veterinarias del Litoral. Universidad Nacional del Litoral. Facultad de Cs.veterinarias. Instituto de Ciencias Veterinarias del Litoral; ArgentinaFil: Díaz, Pablo Uriel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Ciencias Veterinarias del Litoral. Universidad Nacional del Litoral. Facultad de Cs.veterinarias. Instituto de Ciencias Veterinarias del Litoral; ArgentinaFil: Stangaferro, M. L.. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Ciencias Veterinarias del Litoral. Universidad Nacional del Litoral. Facultad de Cs.veterinarias. Instituto de Ciencias Veterinarias del Litoral; ArgentinaFil: Rodriguez, Facundo Miguel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Ciencias Veterinarias del Litoral. Universidad Nacional del Litoral. Facultad de Cs.veterinarias. Instituto de Ciencias Veterinarias del Litoral; ArgentinaFil: Ortega, Hugo Hector. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Ciencias Veterinarias del Litoral. Universidad Nacional del Litoral. Facultad de Cs.veterinarias. Instituto de Ciencias Veterinarias del Litoral; ArgentinaFil: Rey, Florencia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Ciencias Veterinarias del Litoral. Universidad Nacional del Litoral. Facultad de Cs.veterinarias. Instituto de Ciencias Veterinarias del Litoral; ArgentinaFil: Salvetti, Natalia Raquel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Ciencias Veterinarias del Litoral. Universidad Nacional del Litoral. Facultad de Cs.veterinarias. Instituto de Ciencias Veterinarias del Litoral; Argentin

Use of Aerial Laser Scanning to Assess the Effect on C Sequestration of Oak (Quercus ilex L. subsp. ballota [Desf.]Samp-Q. suber L.) Afforestation on Agricultural Land

Conversion of agricultural lands to forest plantations to mitigate rising atmospheric carbon dioxide (CO2) has been proposed, but it depends on accurate estimation of the on-site carbon (C) stocks distribution. The use of aerial laser scanning (ALS) data is a rapidly evolving technology for the quantification of C stocks. We evaluated the use of allometric models together with high-density ALS data for the quantification of biomass and soil C stocks in a 14-year-old Quercus ilex and Q. suber plantation in Southwestern Spain. In 2010, a field survey was performed and tree dasometric and biomass variables were measured. Forty-five soil profiles (N = 180 soil samples) were taken systematically and the soil organic C content (SOC) was determined. Biomass and soil organic C values were regressed against individual dasometric variables and total tree height was used as a predictor variable. Aerial laser scanning data were acquired with a point density of 12 points m−2. Relationships among ALS metrics and tree height were determined using stepwise regression models and used in the allometric models to estimate biomass and SOC C stocks. Finally, a C stock map of the holm-cork oak cover in the study area was generated. We found a tree total biomass of 27.9 kg tree−1 for holm oak and 41.1 kg tree−1 for cork oak. In the holm oak plantation, the SOC content was 36.90 Mg ha−1 for the layer 0–40 cm (SOC40) under the tree crown and 29.26 Mg ha−1 for the inter-planted area, with significant differences from the reference agricultural land (33.35 Mg ha−1). Linear regression models were developed to predict the biomass and SOC at the tree scale, based on tree height (R2 >0.72 for biomass, and R2 >0.62 for SOC). The overall on-site C stock in the holm-cork oak plantation was 35.11 Mg ha−1, representing a net C stock rise of 0.47 Mg ha−1 yr−1. The ALS data allows a reliable estimation of C stocks in holm and cork oak plantations and high-resolution maps of on-site C stocks are useful for silvicultural planning. The cost of ALS data acquisition has decreased and this method can be generalised to plantations of other Mediterranean species established on agricultural lands at regional scales. However, an increase of filed data and the availability of local biomass and, in particular, SOC will improve accurate quantification of the C stocks from allometric equations, and extrapolation to large planted areas

Connecting photometric and spectroscopic granulation signals with CHEOPS and ESPRESSO

Context. Stellar granulation generates fluctuations in photometric and spectroscopic data whose properties depend on the stellar type, composition, and evolutionary state. Characterizing granulation is key for understanding stellar atmospheres and detecting planets. Aims. We aim to detect the signatures of stellar granulation, link spectroscopic and photometric signatures of convection for main-sequence stars, and test predictions from 3D hydrodynamic models. Methods. For the first time, we observed two bright stars (Teff = 5833 and 6205 K) with high-precision observations taken simultaneously with CHEOPS and ESPRESSO. We analyzed the properties of the stellar granulation signal in each individual dataset. We compared them to Kepler observations and 3D hydrodynamic models. While isolating the granulation-induced changes by attenuating and filtering the p-mode oscillation signals, we studied the relationship between photometric and spectroscopic observables. Results. The signature of stellar granulation is detected and precisely characterized for the hotter F star in the CHEOPS and ESPRESSO observations. For the cooler G star, we obtain a clear detection in the CHEOPS dataset only. The TESS observations are blind to this stellar signal. Based on CHEOPS observations, we show that the inferred properties of stellar granulation are in agreement with both Kepler observations and hydrodynamic models. Comparing their periodograms, we observe a strong link between spectroscopic and photometric observables. Correlations of this stellar signal in the time domain (flux versus radial velocities, RV) and with specific spectroscopic observables (shape of the cross-correlation functions) are however difficult to isolate due to S/N dependent variations. Conclusions. In the context of the upcoming PLATO mission and the extreme precision RV surveys, a thorough understanding of the properties of the stellar granulation signal is needed. The CHEOPS and ESPRESSO observations pave the way for detailed analyses of this stellar process

Aplicación de índices de vegetación para evaluar la falta de producción de pastos y montaneras en dehesas.

El ganado porcino ibérico aprovecha los recursos naturales de la dehesa mediante montanera, principalmente la bellota y los pastos existentes. La línea 133 de los seguros agrarios españoles recoge el seguro de compensación por pérdida de pastos, solo para bovino reproductor y de lidia, ovino, caprino y equino, no incluyen los cerdos en montanera. Emplea un Índice de Vegetación de la Diferencia Normalizada (NDVI) medido por satélite sobre pastos desarbolados. El objetivo es comprobar si se puede utilizar un índice de vegetación para estimar la producción de pasto y bellota. Se han tomado datos del aforo de montaneras desde 1999 al 2005, y del pasto en dehesas de Salamanca (Vitigudino), Cáceres (Trujillo) y Córdoba (Pozoblanco) durante 2010 al 2012. Con los datos de 2010 y 2011 se estableció una función de producción del pasto fresco en función del NDVI, mostrando un coeficiente de correlación de 0,975, altamente significativa. Los datos obtenidos en 2012 se utilizaron para validar la función de producción de pasto fresco. La comparación entre los valores observados y simulados para 2012 ha mostrado un coeficiente de correlación de 0,734. Como conclusión, el NDVI puede ser un buen estimador de la cantidad de pasto fresco en dehesas españolas

Application of Vegetation Indices to Estimate Acorn Production at Iberian

The Iberian pig valued natural resources of the pasture when fattened in mountain. The variability of acorn production is not contained in any line of Spanish agricultural insurance. However, the production of arable pasture is covered by line insurance number 133 for loss of pasture compensation. This scenario is only contemplated for breeding cows and brave bulls, sheep, goats and horses, although pigs are not included. This insurance is established by monitoring ten-day composites Normalized Difference Vegetation Index (NDVI) measured by satellite over treeless pastures, using MODIS TERRA satellite. The aim of this work is to check if we can use a satellite vegetation index to estimate the production of acorns

Enseñanza virtual en tiempos de pandemia

The new normality product of COVID-19, leads to the virtualization of pedagogical processes, which are supported by academic platforms as a critical factor for the operation of educational institutions. This research analyzes the virtual teaching modality in a Public University of Peru, considering the fulfillment of the capacities of virtual teaching for the School of Electronic Engineering at the National University José Faustino Sánchez Carrión, Lima, Peru. The study group is represented by a random stratified sample made up of 220 students enrolled in the academic period 2020 - I. It was a quantitative, non-experimental descriptive, ex-post facto study. An online questionnaire was designed and validated to collect data on virtual teaching capabilities. The results show a significantly positive relationship between virtual teaching skills and student performance. It is concluded that although the students allege problems of virtual teaching, it always contributes to the success of the students’ learning. The university’s teacher training processes with respect to digital tools should be strengthened and permanent consultancies for the stakeholders involved should be carried out.La nueva normalidad producto del COVID-19, conduce a la virtualización de los procesos pedagógicos, los cuales se apoyan en plataformas académicas como factor crítico para la operatividad de las instituciones educativas. La presente investigación analiza la modalidad de enseñanza virtual en una Universidad Pública del Perú, considerando el cumplimiento de las capacidades de la enseñanza virtual para la escuela de Ingeniería Electrónica en la Universidad Nacional José Faustino Sánchez Carrión, Lima, Perú. El grupo de estudio está representado por una muestra estratificada aleatoria conformada por 220 estudiantes matriculados en el periodo académico 2020 - I. Fue un estudio cuantitativo, no experimental descriptivo, expost facto. Se diseñó y validó un cuestionario en línea para la recolección de los datos sobre las capacidades de la enseñanza virtual. Los resultados evidencian una relación significativamente positiva entre las capacidades de la enseñanza virtual y el rendimiento de los estudiantes. Se concluye, que a pesar que los estudiantes alegan problemas propios de la enseñanza virtual, ésta siempre contribuye al éxito en el aprendizaje de los estudiantes. Se deben reforzar los procesos de capacitación docente por parte de la universidad con respecto a las herramientas digitales y realizar asesorías permanentes para los actores involucrados

Novel bacterial taxa in a minimal lignocellulolytic consortium and their potential for lignin and plastics transformation

The understanding and manipulation of microbial communities toward the conversion of lignocellulose and plastics are topics of interest in microbial ecology and biotechnology. In this study, the polymer-degrading capability of a minimal lignocellulolytic microbial consortium (MELMC) was explored by genome-resolved metagenomics. The MELMC was mostly composed (>90%) of three bacterial members (Pseudomonas protegens; Pristimantibacillus lignocellulolyticus gen. nov., sp. nov; and Ochrobactrum gambitense sp. nov) recognized by their high-quality metagenome-assembled genomes (MAGs). Functional annotation of these MAGs revealed that Pr. lignocellulolyticus could be involved in cellulose and xylan deconstruction, whereas Ps. protegens could catabolize lignin-derived chemical compounds. The capacity of the MELMC to transform synthetic plastics was assessed by two strategies: (i) annotation of MAGs against databases containing plastic-transforming enzymes; and (ii) predicting enzymatic activity based on chemical structural similarities between lignin- and plastics-derived chemical compounds, using Simplified Molecular-Input Line-Entry System and Tanimoto coefficients. Enzymes involved in the depolymerization of polyurethane and polybutylene adipate terephthalate were found to be encoded by Ps. protegens, which could catabolize phthalates and terephthalic acid. The axenic culture of Ps. protegens grew on polyhydroxyalkanoate (PHA) nanoparticles and might be a suitable species for the industrial production of PHAs in the context of lignin and plastic upcycling

GW150914: First search for the electromagnetic counterpart of a gravitational-wave event by the TOROS collaboration

We present the results of the optical follow-up conducted by the TOROS collaboration of the first gravitational-wave event GW150914. We conducted unfiltered CCD observations (0.35-1 micron) with the 1.5-m telescope at Bosque Alegre starting ~2.5 days after the alarm. Given our limited field of view (~100 square arcmin), we targeted 14 nearby galaxies that were observable from the site and were located within the area of higher localization probability. We analyzed the observations using two independent implementations of difference-imaging algorithms, followed by a Random-Forest-based algorithm to discriminate between real and bogus transients. We did not find any bona fide transient event in the surveyed area down to a 5-sigma limiting magnitude of r=21.7 mag (AB). Our result is consistent with the LIGO detection of a binary black hole merger, for which no electromagnetic counterparts are expected, and with the expected rates of other astrophysical transients.Comment: ApJ Letters, in pres