1,086 research outputs found
Ertragsentwicklung von Erbsen sowie Sommergerste in Reinsaat und in Mischung mit Leindotter oder Koriander im Ă–kologischen Landbau
Mischkulturen können unterschiedliche Wachstumsbedingungen besser ausschöpfen als Monokulturen. Im Gemenge mit Leguminosen können Nicht-Leguminosen überschüssigen Stickstoff aus der Bodenlösung aufnehmen. Ein ökonomischer Zusatzertrag wird bei einer Beimengung von Leindotter zu Erbsen oder Sommergerste diskutiert. Erbsenreinsaaten erreichten im Vergleich zu beiden Leindotter-Varianten gesichert höhere Erträge; Erbsen mit resp. ohne Koriander unterschieden sich nicht. Sommergerste – Reinsaaten waren bezüglich dem Ertrag den Mischungen mit Leindotter überlegen; Koriander wurde von der Sommergerste vollständig unterdrückt. Abschließend kann festgehalten werden, dass unter limitierenden Niederschlägen im pannonischen Klimaraum dem Mischkulturanbau enge Grenzen gesetzt sind
When the optimal is not the best: parameter estimation in complex biological models
Background: The vast computational resources that became available during the
past decade enabled the development and simulation of increasingly complex
mathematical models of cancer growth. These models typically involve many free
parameters whose determination is a substantial obstacle to model development.
Direct measurement of biochemical parameters in vivo is often difficult and
sometimes impracticable, while fitting them under data-poor conditions may
result in biologically implausible values.
Results: We discuss different methodological approaches to estimate
parameters in complex biological models. We make use of the high computational
power of the Blue Gene technology to perform an extensive study of the
parameter space in a model of avascular tumor growth. We explicitly show that
the landscape of the cost function used to optimize the model to the data has a
very rugged surface in parameter space. This cost function has many local
minima with unrealistic solutions, including the global minimum corresponding
to the best fit.
Conclusions: The case studied in this paper shows one example in which model
parameters that optimally fit the data are not necessarily the best ones from a
biological point of view. To avoid force-fitting a model to a dataset, we
propose that the best model parameters should be found by choosing, among
suboptimal parameters, those that match criteria other than the ones used to
fit the model. We also conclude that the model, data and optimization approach
form a new complex system, and point to the need of a theory that addresses
this problem more generally
Interplay between distribution of live cells and growth dynamics of solid tumours
Experiments show that simple diffusion of nutrients and waste molecules is not sufficient to explain the typical multilayered structure of solid tumours, where an outer rim of proliferating cells surrounds a layer of quiescent but viable cells and a central necrotic region. These experiments challenge models of tumour growth based exclusively on diffusion. Here we propose a model of tumour growth that incorporates the volume dynamics and the distribution of cells within the viable cell rim. The model is suggested by in silico experiments and is validated using in vitro data. The results correlate with in vivo data as well, and the model can be used to support experimental and clinical oncology
Tumor growth instability and the onset of invasion
Motivated by experimental observations, we develop a mathematical model of
chemotactically directed tumor growth. We present an analytical study of the
model as well as a numerical one. The mathematical analysis shows that: (i)
tumor cell proliferation by itself cannot generate the invasive branching
behaviour observed experimentally, (ii) heterotype chemotaxis provides an
instability mechanism that leads to the onset of tumor invasion and (iii)
homotype chemotaxis does not provide such an instability mechanism but enhances
the mean speed of the tumor surface. The numerical results not only support the
assumptions needed to perform the mathematical analysis but they also provide
evidence of (i), (ii) and (iii). Finally, both the analytical study and the
numerical work agree with the experimental phenomena.Comment: 12 pages, 8 figures, revtex
The radio and IR counterparts of the ring nebula around HD211564
We report the detection of the radio and infrared counterparts of the ring
nebula around the WN3(h) star HD211564 (WR152), located to the southwest of the
HII region Sh2132. Using radio continuum data from the Canadian Galactic Plane
Survey, we identified the radio counterparts of the two concentric rings, of
about 9' and 16' in radius, related to the star. After applying a filling
factor f = 0.05-0.12, electron densities and ionized masses are in the range
10-16 cm^-3 and 450-700 Mo, respectively. The analysis of the HI gas emission
distribution allowed the identification of 5900 Mo of neutral atomic gas with
velocities between -52 and -43 km/s probably linked to the nebula. The region
of the nebula is almost free of molecular gas. Only four small clumps were
detected, with a total molecular mass of 790 Mo. About 310 Mo are related to a
small infrared shell-like source linked to the inner ring, which is also
detected in the MSX band A. An IRAS YSO candidate is detected in coincidence
with the shell-like IR source.
We suggest that the optical nebula and its neutral counterparts originated
from the stellar winds from the WR star and its massive progenitor, and are
evolving in the envelope of a slowly expanding shell centered at (l,b) = (102
30, -0 50), of about 31 pc in radius. The bubble's energy conversion efficiency
is in agreement with recent numerical analysis and with observational results.Comment: 11 pages, 7 figures, accepted in MNRA
Azobenzene-functionalized alkanethiols in self-assembled monolayers on gold
Self-assembledmonolayers (SAMs) of 4-trifluoromethyl-azobenzene-4'-methyleneoxy-alkanethiols (CF3–C6H4–N=N–C6H4–O–(CH2) n–SH on (111)-oriented polycrystalline gold films on mica were examined by X-ray photoelectron spectroscopy (XPS) and X-ray absorption spectroscopy (XAS). The spectra are analyzed with the help of density-functional-theory calculations of the isolated molecule. Only one doublet is detected in the sulphur 2p spectra of the investigated SAMs, consistent with a thiolate bond of the molecule to the gold surface. The C 1s XP spectra and the corresponding XAS π* resonance exhibit a rich structure which is assigned to the carbon atoms in the different chemical surroundings. Comparing XPS binding energies of the azobenzene moiety and calculated initial-state shifts reveals comparable screening of all C 1s core holes. While the carbon 1s XPS binding energy lies below the π*-resonance excitation-energy, the reversed order is found comparing core ionization and neutral core excitation of the nitrogen 1s core-hole of the azo group. This surprising difference in core-hole binding energies is interpreted as site-dependent polarization screening and charge transfer among the densely packed aromatic moieties. We propose that a quenching of the optical excitation within the molecular layer is thus one major reason for the low trans to cis photo-isomerization rate of azobenzene in romaticaliphatic SAMs
Unveiling the molecular environment of the ring nebula RCW 78
We present a study of the ionized, neutral atomic, and molecular gas
associated with the ring nebula RCW 78 around the WR star HD 117688 (= WR 55).
We based our study on CO observations carried out with the SEST and NANTEN
telescopes. We report the detection of molecular gas with velocities in the
range -56 to -33 km/s. The CO emission is mainly connected to the western
section, with a total molecular mass of 1.3 x 10^5 solar masses. The analysis
of the HI gas distribution reveals the HI envelope of the molecular cloud,
while the radio continuum emission shows a ring-like structure, which is the
radio counterpart of the optical nebula. The gas distribution is compatible
with the western section of RCW 78 having originated in the photodissociation
and ionization of the molecular gas by HD 117688, and with the action of the
stellar winds of the WR star. A number of infrared point sources classified as
YSO candidates showed that stellar formation activity is present in the
molecular gas linked to the nebula. The fact that the expansion of the bubble
have triggered star formation in this region can not be discarded.Comment: 15 pages, 11 Postscript figures, to be published in A&
Massive stars and the energy balance of the interstellar medium. II. The 35 solar mass star and a solution to the "missing wind problem"
We continue our numerical analysis of the morphological and energetic
influence of massive stars on their ambient interstellar medium for a 35 solar
mass star that evolves from the main sequence through red supergiant and
Wolf-Rayet phases, until it ultimately explodes as a supernova. We find that
structure formation in the circumstellar gas during the early main-sequence
evolution occurs as in the 60 solar mass case but is much less pronounced
because of the lower mechanical wind luminosity of the star. Since on the other
hand the shell-like structure of the HII region is largely preserved, effects
that rely on this symmetry become more important. At the end of the stellar
lifetime 1% of the energy released as Lyman continuum radiation and stellar
wind has been transferred to the circumstellar gas. From this fraction 10% is
kinetic energy of bulk motion, 36% is thermal energy, and the remaining 54% is
ionization energy of hydrogen. The sweeping up of the slow red supergiant wind
by the fast Wolf-Rayet wind produces remarkable morphological structures and
emission signatures, which are compared with existing observations of the
Wolf-Rayet bubble S308. Our model reproduces the correct order of magnitude of
observed X-ray luminosity, the temperature of the emitting plasma as well as
the limb brightening of the intensity profile. This is remarkable, because
current analytical and numerical models of Wolf-Rayet bubbles fail to
consistently explain these features. A key result is that almost the entire
X-ray emission in this stage comes from the shell of red supergiant wind swept
up by the shocked Wolf-Rayet wind rather than from the shocked Wolf-Rayet wind
itself as hitherto assumed and modeled. This offers a possible solution to what
is called the ``missing wind problem'' of Wolf-Rayet bubbles.Comment: 52 pages, 20 figures, 2 tables, accepted for publication in the
Astrophysical Journa
Bevacizumab for newly diagnosed ovarian cancers: Best candidates among high-risk disease patients (icon-7)
Bevacizumab is approved as a maintenance treatment in first-line setting in advanced-stage III-IV ovarian cancers, because GOG-0218 and ICON-7 phase III trials demonstrated progression-free survival benefits. However, only the subgroup of patients with high-risk diseases (stage IV, and incompletely resected stage III) derived an overall survival (OS) gain in the ICON-7 trial (4.8 months). The modeled CA-125 elimination rate constant K (KELIM) parameter, based on the longitudinal CA- 125 kinetics during the first 100 days of chemotherapy, is a potential indicator of the tumor primary chemo-sensitivity. In the ICON-7 trial dataset, the OS of patients within the low- and high-risk disease groups was assessed according to treatment arms and KELIM. Among the patients with high-risk diseases, those with favorable standardized KELIM of at least 1.0 (n=214, 46.7%) had no survival benefit from bevacizumab, whereas those with unfavorable KELIM less than 1.0 (n=244, 53.2%) derived the highest OS benefit (absolute difference = 9.1 months, 2-sided log-rank P=.10; Cox hazard ratio = 0.78, 95% confidence interval = 0.58 to 1.04, 2-sided P=.09)
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