Prostasome-like particles in stallion semen.

Human semen contains membranous vesicles called prosta- somes. They are secreted by the prostate gland and contain large amounts of cholesterol, sphingomyelin, and Ca2. Prostasomes enhance the motility of ejaculated spermatozoa and are in- volved in a number of additional biological functions. No prostasome-like vesicles have been described in horse se- men up to now. We have demonstrated the presence of pros- tasome-like vesicles in the equine semen and characterized them as to size, morphology, and lipid composition; we have found that they are similar to human prostasomes in many re- spects. We propose that these vesicles might be important for the fecundity of horse semen. This is of interest since the success of artificial insemination is limited by the fact that stallion sperm barely survive cryopreservation

In an octopus's garden in the shade: Underwater image analysis of litter use by benthic octopuses

Benthic octopuses have been widely documented in artificial shelters for decades, and this use is apparently increasing. Despite any possible positive effects, the use of litter as shelter could have negative implications. In this work, we aimed to elucidate the interactions of octopuses with marine litter, identifying types of interactions and affected species and regions. To achieve this, we obtained 261 underwater images from ‘citizen science’ records, and identified 8 genera and 24 species of benthic octopuses interacting with litter. Glass objects were present in 41.6% of interactions, and plastic in 24.7%. Asia presented the highest number of images, and most records were from 2018 to 2021. Citizen science provided important evidence on octopus/marine litter interactions, highlighting its value and the need for more investigations on the subject. This information is fundamental to help prevent and mitigate the impacts of litter on octopuses, and identify knowledge gaps that require attention

Forking Without Clicking: on How to Identify Software Repository Forks

International audienceThe notion of software "fork" has been shifting over time from the (negative) phenomenon of community disagreements that result in the creation of separate development lines and ultimately software products, to the (positive) practice of using distributed version control system (VCS) repositories to collaboratively improve a single product without stepping on each others toes. In both cases the VCS repositories participating in a fork share parts of a common development history. Studies of software forks generally rely on hosting platform metadata, such as GitHub, as the source of truth for what constitutes a fork. These "forge forks" however can only identify as forks repositories that have been created on the platform, e.g., by clicking a "fork" button on the platform user interface. The increased diversity in code hosting platforms (e.g., GitLab) and the habits of significant development communities (e.g., the Linux kernel, which is not primarily hosted on any single platform) call into question the reliability of trusting code hosting platforms to identify forks. Doing so might introduce selection and methodological biases in empirical studies. In this article we explore various definitions of "software forks", trying to capture forking workflows that exist in the real world. We quantify the differences in how many repositories would be identified as forks on GitHub according to the various definitions, confirming that a significant number could be overlooked by only considering forge forks. We study the structure and size of fork networks , observing how they are affected by the proposed definitions and discuss the potential impact on empirical research

Tubulin nitration in human gliomas

Immunohistochem. and biochem. investigations showed that significant protein nitration occurs in human gliomas, esp. in grade IV glioblastomas at the level of astrocytes and oligodendrocytes and neurons. Enhanced alpha-tubulin immunoreactivity was co-present in the same elements in the glioblastomas. Proteomic methodologies were employed to identify a nitrated protein band at 55 kDa as alpha-tubulin. Peptide mass fingerprinting procedures demonstrated that tubulin is nitrated at Tyr224 in grade IV tumor samples but is unmodified in grade I samples and in non-cancerous brain tissue. These results provide the first characterization of endogenously nitrated tubulin from human tumor samples

Arachidonic Acid/ppara Enhancement of Ca2+-Regulated Exocytosis in Antral Mucous Cells of Guinea Pig

N is known to be the most limiting element for vegetation growth in temperate and boreal forests. The expected increases in global temperature are predicted to accelerate N mineralization, therefore incrementing N availability in the soil and affecting the soil C cycle as well. While there is an abundance of C data collected to fulfill the requirements for national GHG accounting, more limited information is available for soil N accumulation and storage in relation to forest categories and altitudinal gradients. The data collected by the second Italian National Forest Inventory, spanning a wide range of temperature and precipitation values (10° latitudinal range), represented a unique opportunity to calculate N content and C/N ratio of the different soil layers to a depth of 30 cm. Boosted Regression Tree (BRT) models were applied to investigate the main determinants of soil N distribution and C/N ratio. Forest category was shown to be the main explanatory factor of soil N variability in seven out of eight models, both for forest floor and mineral soil layers. Moreover latitude explained a larger share of variability than single climate variables. BRT models explained, on average, the 49% of the data variability, with the remaining fraction likely due to soil-related variables that were unaccounted for. Accurate estimations of N pools and their determinants in a climate change perspective are consequently required to predict the potential impact of their degradation on forest soil N pools

The Software Heritage Graph Dataset: Large-scale Analysis of Public Software Development History

International audienceSoftware Heritage is the largest existing public archive of software source code and accompanying development history. It spans more than five billion unique source code files and one billion unique commits , coming from more than 80 million software projects. These software artifacts were retrieved from major collaborative development platforms (e.g., GitHub, GitLab) and package repositories (e.g., PyPI, Debian, NPM), and stored in a uniform representation linking together source code files, directories, commits, and full snapshots of version control systems (VCS) repositories as observed by Software Heritage during periodic crawls. This dataset is unique in terms of accessibility and scale, and allows to explore a number of research questions on the long tail of public software development, instead of solely focusing on "most starred" repositories as it often happens

An Essential Physiological Role for MCT8 in Bone in Male Mice

T3 is an important regulator of skeletal development and adult bone maintenance. Thyroid hormone action requires efficient transport of T4 and T3 into target cells. We hypothesized that monocarboxylate transporter (MCT) 8, encoded by Mct8 on the X-chromosome, is an essential thyroid hormone transporter in bone. To test this hypothesis, we determined the juvenile and adult skeletal phenotypes of male Mct8 knockout mice (Mct8KO) and Mct8D1D2KO compound mutants, which additionally lack the ability to convert the prohormone T4 to the active hormone T3. Prenatal skeletal development was normal in both Mct8KO and Mct8D1D2KO mice, whereas postnatal endochondral ossification and linear growth were delayed in both Mct8KO and Mct8D1D2KO mice. Furthermore, bone mass and mineralization were decreased in adult Mct8KO and Mct8D1D2KO mice, and compound mutants also had reduced bone strength. Delayed bone development and maturation in Mct8KO and Mct8D1D2KO mice is consistent with decreased thyroid hormone action in growth plate chondrocytes despite elevated serum T3 concentrations, whereas low bone mass and osteoporosis reflects increased thyroid hormone action in adult bone due to elevated systemic T3 levels. These studies identify an essential physiological requirement for MCT8 in chondrocytes, and demonstrate a role for additional transporters in other skeletal cells during adult bone maintenance

A Serum Resistin and Multicytokine Inflammatory Pathway Is Linked With and Helps Predict All-cause Death in Diabetes

Context: Type 2 diabetes (T2D) shows a high mortality rate, partly mediated by atherosclerotic plaque instability. Discovering novel biomarkers may help identify high-risk patients who would benefit from more aggressive and specific managements. We recently described a serum resistin and multicytokine inflammatory pathway (REMAP), including resistin, interleukin (IL)-1 beta, IL-6, IL-8, and TNF-alpha, that is associated with cardiovascular disease.Objective: We investigated whether REMAP is associated with and improves the prediction of mortality in T2D.Methods: A REMAP score was investigated in 3 cohorts comprising 1528 patients with T2D (409 incident deaths) and in 59 patients who underwent carotid endarterectomy (CEA; 24 deaths). Plaques were classified as unstable/stable according to the modified American Heart Association atherosclerosis classification.Results: REMAP was associated with all-cause mortality in each cohort and in all 1528 individuals (fully adjusted hazard ratio [HR] for 1 SD increase=1.34, P<.001). In CEA patients, REMAP was associated with mortality (HR=1.64, P=.04) and a modest change was observed when plaque stability was taken into account (HR=1.58; P=.07). REMAP improved discrimination and reclassification measures of both Estimation of Mortality Risk in Type 2 Diabetic Patients and Risk Equations for Complications of Type 2 Diabetes, well-established prediction models of mortality in T2D (P<.05-<.001).Conclusion: REMAP is independently associated with and improves predict all-cause mortality in T2D; it can therefore be used to identify high-risk individuals to be targeted with more aggressive management. Whether REMAP can also identify patients who are more responsive to IL-6 and IL-1 beta monoclonal antibodies that reduce cardiovascular burden and total mortality is an intriguing possibility to be tested

Multi-proxy dating the ‘Millennium Eruption’ of Changbaishan to late 946 CE

Ranking among the largest volcanic eruptions of the Common Era (CE), the ‘Millennium Eruption’ of Changbaishan produced a widely-dispersed tephra layer (known as the B-Tm ash), which represents an important tie point for palaeoenvironmental studies in East Asia. Hitherto, there has been no consensus on its age, with estimates spanning at least the tenth century CE. Here, we identify the cosmogenic radiocarbon signal of 775 CE in a subfossil larch engulfed and killed by pyroclastic currents emplaced during the initial rhyolitic phase of the explosive eruption. Combined with glaciochemical evidence from Greenland, this enables us to date the eruption to late 946 CE. This secure date rules out the possibility that the Millennium Eruption contributed to the collapse of the Bohai Kingdom (Manchuria/Korea) in 926 CE, as has previously been hypothesised. Further, despite the magnitude of the eruption, we do not see a consequent cooling signal in tree-ring-based reconstructions of Northern Hemisphere summer temperatures. A tightly-constrained date for the Millennium Eruption improves the prospect for further investigations of historical sources that may shed light on the eruption's impacts, and enhances the value of the B-Tm ash as a chronostratigraphic marker.Ranking among the largest volcanic eruptions of the Common Era (CE), the ‘Millennium Eruption’ of Changbaishan produced a widely-dispersed tephra layer (known as the B-Tm ash), which represents an important tie point for palaeoenvironmental studies in East Asia. Hitherto, there has been no consensus on its age, with estimates spanning at least the tenth century CE. Here, we identify the cosmogenic radiocarbon signal of 775 CE in a subfossil larch engulfed and killed by pyroclastic currents emplaced during the initial rhyolitic phase of the explosive eruption. Combined with glaciochemical evidence from Greenland, this enables us to date the eruption to late 946 CE. This secure date rules out the possibility that the Millennium Eruption contributed to the collapse of the Bohai Kingdom (Manchuria/Korea) in 926 CE, as has previously been hypothesised. Further, despite the magnitude of the eruption, we do not see a consequent cooling signal in tree-ring-based reconstructions of Northern Hemisphere summer temperatures. A tightly-constrained date for the Millennium Eruption improves the prospect for further investigations of historical sources that may shed light on the eruption's impacts, and enhances the value of the B-Tm ash as a chronostratigraphic marker