Les biens communs sans tragédie : effets de la pression sociale et des convictions

Pourquoi faire un effort pour la communauté sans rien recevoir en retour? C’est habituellement par conviction ou pour répondre à une norme sociale. En s’intéressant au problème du recyclage, nous définissons un modèle de comportement qui intègre ces deux facteurs. Nous déterminons sous quelles conditions un individu décide d’agir bénévolement, puis nous étudions comment ce comportement se propage dans la population. Cela nous permet de déduire comment un gouvernement doit pondérer ses efforts entre la publicité et la consigne pour tendre vers un taux de recyclage parfait au coût minimal. Nous prouvons aussi que dans certaines circonstances, il est préférable de ne pas encourager la participation au bien public. En effet, à mesure que plus de gens y participent, des tensions sociales émergent entre ceux qui font un effort et ceux qui n’en font pas. Celles-ci peuvent être assez fortes pour contrebalancer les bénéfices attendus du bien publicThe commons need not be a tragedy: impact of peer-pressure and opinions Why do people help the community without getting anything in return? Usually, they either hold the firm belief they should do so or they want to follow a social norm. The behavioural model of this paper takes those two factors into account and applies them to recycling issues. It shows under which condition people act selflessly and how this behaviour spreads across the population. This paper then determines how governments must balance advertising and packaging refunding in order to increase recycling rate at minimal cost. It also proves that under certain circumstances it is preferable not to start transition toward cooperation. Indeed, as people progressively start cooperating, the population becomes divided between followers and opponents to this new attitude. As long as this heterogeneity remains, peer-pressure causes a cost that may outweigh the expected benefits of cooperation

Analysis of the meiotic segregation in intergeneric hybrids of tilapias

Tilapia species exhibit a large ecological diversity and an important propensity to interspecific hybridisation. This has been shown in the wild and used in aquaculture. However, despite its important evolutionary implications, few studies have focused on the analysis of hybrid genomes and their meiotic segregation. Intergeneric hybrids between Oreochromis niloticus and Sarotherodon melanotheron, two species highly differentiated genetically, ecologically, and behaviourally, were produced experimentally. The meiotic segregation of these hybrids was analysed in reciprocal second generation hybrid (F2) and backcross families and compared to the meiosis of both parental species, using a panel of 30 microsatellite markers. Hybrid meioses showed segregation in accordance to Mendelian expectations, independent from sex and the direction of crosses. In addition, we observed a conservation of linkage associations between markers, which suggests a relatively similar genome structure between the two parental species and the apparent lack of postzygotic incompatibility, despite their important divergence. These results provide genomics insights into the relative ease of hybridisation within cichlid species when prezygotic barriers are disrupted. Overall our results support the hypothesis that hybridisation may have played an important role in the evolution and diversification of cichlids

Microsatellites Cross-Species Amplification across Some African Cichlids

The transfer of the genomic resources developed in the Nile tilapia, Oreochromis niloticus, to other Tilapiines sensu lato and African cichlid would provide new possibilities to study this amazing group from genetics, ecology, evolution, aquaculture, and conservation point of view. We tested the cross-species amplification of 32 O. niloticus microsatellite markers in a panel of 15 species from 5 different African cichlid tribes: Oreochromines (Oreochromis, Sarotherodon), Boreotilapiines (Tilapia), Chromidotilapines, Hemichromines, and Haplochromines. Amplification was successfully observed for 29 markers (91%), with a frequency of polymorphic (P95) loci per species around 70%. The mean number of alleles per locus and species was 3.2 but varied from 3.7 within Oreochromis species to 1.6 within the nontilapia species. The high level of cross-species amplification and polymorphism of the microsatellite markers tested in this study provides powerful tools for a wide range of molecular genetic studies within tilapia species as well as for other African cichlids

Spatial and temporal variation in population genetic structure of wild Nile tilapia (Oreochromis niloticus) across Africa

<p>Abstract</p> <p>Background</p> <p>Reconstructing the evolutionary history of a species is challenging. It often depends not only on the past biogeographic and climatic events but also the contemporary and ecological factors, such as current connectivity and habitat heterogeneity. In fact, these factors might interact with each other and shape the current species distribution. However, to what extent the current population genetic structure reflects the past and the contemporary factors is largely unknown. Here we investigated spatio-temporal genetic structures of Nile tilapia (<it>Oreochromis niloticus</it>) populations, across their natural distribution in Africa. While its large biogeographic distribution can cause genetic differentiation at the paleo-biogeographic scales, its restricted dispersal capacity might induce a strong genetic structure at micro-geographic scales.</p> <p>Results</p> <p>Using nine microsatellite loci and 350 samples from ten natural populations, we found the highest genetic differentiation among the three ichthyofaunal provinces and regions (Ethiopian, Nilotic and Sudano-Sahelian) (<it>R</it>_ST= 0.38 - 0.69). This result suggests the predominant effect of paleo-geographic events at macro-geographic scale. In addition, intermediate divergences were found between rivers and lakes within the regions, presumably reflecting relatively recent interruptions of gene flow between hydrographic basins (<it>R_ST</it>= 0.24 - 0.32). The lowest differentiations were observed among connected populations within a basin (<it>R_ST</it>= 0.015 in the Volta basin). Comparison of temporal sample series revealed subtle changes in the gene pools in a few generations (<it>F </it>= 0 - 0.053). The estimated effective population sizes were 23 - 143 and the estimated migration rate was moderate (m ~ 0.094 - 0.097) in the Volta populations.</p> <p>Conclusions</p> <p>This study revealed clear hierarchical patterns of the population genetic structuring of <it>O. niloticus </it>in Africa. The effects of paleo-geographic and climatic events were predominant at macro-geographic scale, and the significant effect of geographic connectivity was detected at micro-geographic scale. The estimated effective population size, the moderate level of dispersal and the rapid temporal change in genetic composition might reflect a potential effect of life history strategy on population dynamics. This hypothesis deserves further investigation. The dynamic pattern revealed at micro-geographic and temporal scales appears important from a genetic resource management as well as from a biodiversity conservation point of view.</p

The Genomic Substrate for Adaptive Radiation: Copy Number Variation across 12 Tribes of African Cichlid Species

© 2019 Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution 2019. This work is written by US Government employees and is in the public domain in the US. The initial sequencing of five cichlid genomes revealed an accumulation of genetic variation, including extensive copy number variation in cichlid lineages particularly those that have undergone dramatic evolutionary radiation. Gene duplication has the potential to generate substantial molecular substrate for the origin of evolutionary novelty. We use array-based comparative heterologous genomic hybridization to identify copy number variation events (CNVEs) for 168 samples representing 53 cichlid species including the 5 species for which full genome sequence is available. We identify an average of 50-100 CNVEs per individual. For those species represented by multiple samples, we identify 150-200 total CNVEs suggesting a substantial amount of intraspecific variation. For these species, only ∼10% of the detected CNVEs are fixed. Hierarchical clustering of species according to CNVE data recapitulates phylogenetic relationships fairly well at both the tribe and radiation level. Although CNVEs are detected on all linkage groups, they tend to cluster in "hotspots" and are likely to contain and be flanked by transposable elements. Furthermore, we show that CNVEs impact functional categories of genes with potential roles in adaptive phenotypes that could reasonably promote divergence and speciation in the cichlid clade. These data contribute to a more complete understanding of the molecular basis for adaptive natural selection, speciation, and evolutionary radiation

Variability of amphidromous organism isotopic niches in three Guadeloupe rivers affected by damming and water catchment

Native fauna of the tropical volcanic part of Guadeloupe is amphidromous: juveniles born in rivers but that grow in the sea need to migrate upstream to colonise their adult habitat in rivers. This migration is affected by any human-made obstacles placed in their way. Moreover, on volcanic tropical islands, streams are the main source of water catchment for the human population. This deeply affects river hydrology and characteristics. Both damming and water catchment potentially affect community diversity and species demography, but they may also alter the trophic ecology of the river fauna. Using stable isotopes and the stable isotope Bayesian ellipses approach in R (SIBER), this study aimed to assess the isotopic niche variability of riverine fauna of three persistent small rivers of Basse-Terre Island (Guadeloupe) affected by damming and water catchment. Using electrofishing, decapods and fishes (gobies) of three rivers were sampled upstream and downstream of dams. Our results demonstrated that the variability of the isotopic niches was extremely high between rivers but varied less between stations of the same river. Our results revealed complex and river-specific effects and a pattern merged with natural variability. Our two hypotheses (i.e., increase of resources upstream of dams and differential responses of trophic guilds to damming and water catchment) were only weakly supported and never in an unambiguous manner. Our study showed that it is necessary to consider the ‘noise’ generated by natural variability to observe and understand changes in the trophic ecology of associated fauna in relation to damming and water catchment.Réponses démographique et adaptative aux perturbations de continuité écologique chez les espèces amphidromes (Gobiidae et Palaemonidae) (2016-05/projet227)

Structure and Sequence of the Sex Determining Locus in Two Wild Populations of Nile Tilapia

In domesticated strains of the Nile tilapia, phenotypic sex has been linked to genetic variants on linkage groups 1, 20 and 23. This diversity of sex-loci might reflect a naturally polymorphic sex determination system in Nile tilapia, or it might be an artefact arising from the process of domestication. Here, we searched for sex-determiners in wild populations from Kpandu, Lake Volta (Ghana-West Africa), and from Lake Koka (Ethiopia-East Africa) that have not been subjected to any genetic manipulation. We analysed lab-reared families using double-digest Restriction Associated DNA sequencing (ddRAD) and analysed wild-caught males and females with pooled whole-genome sequencing (WGS). Strong sex-linked signals were found on LG23 in both populations, and sex-linked signals with LG3 were observed in Kpandu samples. WGS uncovered blocks of high sequence coverage, suggesting the presence of B chromosomes. We confirmed the existence of a tandem amh duplication in LG23 in both populations and determined its breakpoints between the oaz1 and dot1l genes. We found two common deletions of ~5 kb in males and confirmed the presence of both amhY and amh∆Y genes. Males from Lake Koka lack both the previously reported 234 bp deletion and the 5 bp frameshift-insertion that creates a premature stop codon in amh∆Y