H1 photonic crystal cavitites for hybrid quantum information protocols

Hybrid quantum information protocols are based on local qubits, such as trapped atoms, NV centers, and quantum dots, coupled to photons. The coupling is achieved through optical cavities. Here we demonstrate far-field optimized H1 photonic crystal membrane cavities combined with an additional back reflection mirror below the membrane that meet the optical requirements for implementing hybrid quantum information protocols. Using numerical optimization we find that 80% of the light can be radiated within an objective numerical aperture of 0.8, and the coupling to a single-mode fiber can be as high as 92%. We experimentally prove the unique external mode matching properties by resonant reflection spectroscopy with a cavity mode visibility above 50%.Comment: 14 pages, 11 figure

Identification and characterization of MUS81 point mutations that abolish interaction with the SLX4 scaffold protein

AbstractMUS81-EME1 is a conserved structure-selective endonuclease with a preference for branched DNA substrates in vitro that correspond to intermediates of DNA repair. Cells lacking MUS81 or EME1 show defects in the repair of DNA interstrand crosslinks (ICL) resulting in hypersensitivity to agents such as mitomycin C. In metazoans, a proportion of cellular MUS81-EME1 binds the SLX4 scaffold protein, which is itself instrumental for ICL repair. It was previously reported that mutations in SLX4 that abolished interaction with MUS81 affected ICL repair in human cells but not in murine cells. In this study we looked the other way around by pinpointing amino acid residues in MUS81 that when mutated abolish the interaction with SLX4. These mutations fully rescued the mitomycin C hypersensitivity of MUS81 knockout murine cells, but they were unable to rescue the sensitivity of two different human cell lines defective in MUS81. These data support an SLX4-dependent role for MUS81 in the repair, but not the induction of ICL-induced double-strand breaks. This study sheds light on the extent to which MUS81 function in ICL repair requires interaction with SLX4

Pulsed chronopotentiometric membrane electrodes based on plasticized poly(vinyl chloride) with covalently bound ferrocene functionalities as solid contact transducer

Ion-selective membrane materials based on poly(vinyl chloride) (PVC)-containing covalently attached redox-active ferrocene (Fc) groups are characterized here as all-solid-state pulsed voltammetric ion sensors. The redox capacity of the membrane increases 7-fold with a doubling of the Fc content and 3-fold with the addition of 10 wt % of the lipophilic electrolyte ETH 500, tetradodecylammonium tetrakis(4-chlorophenyl) borate. This salt improves the ionic conductivity of the membrane and appears to make the Fc groups electrochemically more accessible. A too high content of the two, on the other hand, was found to cause undesired sensitivity to redox-active species present in the sample solution. Dilution of the membrane with a plasticizer eliminated this redox sensitivity while preserving its high redox capacity. A practical application of the designed electrodes in electrochemical analysis was demonstrated with a multi-pulse protocol that includes a current-controlled ion uptake pulse, followed by an open-circuit potential (OCP) measurement and a regeneration pulse. Potentiometric calibration curves obtained with this protocol exhibited a linear response with near-Nernstian slopes for acetate, nitrate, chloride, and perchlorate ions with the selectivity expected for an ion-exchanging membrane

LOOP:A physical artifact to facilitate seamless interaction with personal data in everyday life

We investigated how a physical artifact could support seamless interaction with personal activity data in everyday life. We introduce LOOP (Figure 1), a physical artifact that changes its shape according to the activity data of the owner, providing an abstract visualization. This paper reports on the design process of LOOP that was informed by interviews and co-creation sessions with end users. We conclude with future work on the evaluation of the concept. This paper makes two main contributions. Firstly, LOOP is proposed as an example of an alternative approach to physically represent activity data. Secondly, the design process and rationale behind LOOP are presented as design knowledge

A novel approach to light-front perturbation theory

We suggest a possible algorithm to calculate one-loop n-point functions within a variant of light-front perturbation theory. The key ingredients are the covariant Passarino-Veltman scheme and a surprising integration formula that localises Feynman integrals at vanishing longitudinal momentum. The resulting expressions are generalisations of Weinberg's infinite-momentum results and are manifestly Lorentz invariant. For n = 2 and 3 we explicitly show how to relate those to light-front integrals with standard energy denominators. All expressions are rendered finite by means of transverse dimensional regularisation.Comment: 10 pages, 5 figure

A modeling approach for mean fluorescence intensity value harmonization and cutoff prediction for luminex single antigen bead assays of two different vendors

Luminex single antigen bead (SAB) kits from One Lambda (OL) and Lifecodes (LC) are widely used for HLA antibody detection but have substantial differences in design and assay protocol resulting in different mean fluorescence intensity (MFI) values. Here, we present a non-linear modeling approach to accurately convert MFI values between two vendors and to establish user-independent MFI cutoffs when analyzing big datasets. HLA antibody data from a total of 47 EDTA-treated sera tested using both OL and LC SAB kits were analyzed. MFI comparisons were made for the common 84 HLA class I and 63 class II beads. In the exploration set (n = 24), a non-linear hyperbola model on raw MFI corrected by locus-specific highest self MFI subtraction yielded the highest correlation (class I r2: 0.946, class II r2: 0.898). Performance of the model was verified in an independent validation set (n = 12) (class I r2: 0.952, class II r2: 0.911). Furthermore, in an independent cohort of post-transplant serum samples (n = 11) using the vendor-specific MFI cutoffs dictated by the current model, we found 94% accuracy in bead-specific reactivity assignments by the two vendors. We recommend using the non-linear hyperbola modeling approach with self HLA correction and locus-specific analyzes to harmonize MFI values between two vendors in particular research datasets. As there are considerable variations between the two assays, using MFI conversion for individual patient samples is not recommended.</p

Maintenance of genetic variation in plants and pathogens involves complex networks of gene-for-gene interactions

The RPP13 [recognition of Hyaloperonospora arabidopsidis (previously known as Peronospora parasitica)] resistance (R) gene in Arabidopsis thaliana exhibits the highest reported level of sequence diversity among known R genes. Consistent with a co-evolutionary model, the matching effector protein ATR13 (A. thaliana-recognized) from H. arabidopsidis reveals extreme levels of allelic diversity. We isolated 23 new RPP13 sequences from a UK metapopulation, giving a total of 47 when combined with previous studies. We used these in functional studies of the A. thaliana accessions for their resistance response to 16 isolates of H. arabidopsidis. We characterized the molecular basis of recognition by the expression of the corresponding ATR13 genes from these 16 isolates in these host accessions. This allowed the determination of which alleles of RPP13 were responsible for pathogen recognition and whether recognition was dependent on the RPP13/ATR13 combination. Linking our functional studies with phylogenetic analysis, we determined that: (i) the recognition of ATR13 is mediated by alleles in just a single RPP13 clade; (ii) RPP13 alleles in other clades have evolved the ability to detect other pathogen ATR protein(s); and (iii) at least one gene, unlinked to RPP13 in A. thaliana, detects a different subgroup of ATR13 allele